RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 VWA5AO00534 786 aa11.06□□□□□ -0.64
CAST-220ENST00000508117 CD4P01730 458 aa11.06□□□□□ -0.64
CAST-220ENST00000508117 FGBP02675 491 aa11.06□□□□□ -0.64
CAST-220ENST00000508117 ACRP10323 421 aa11.06□□□□□ -0.64
CAST-220ENST00000508117 RARSP54136 660 aaKnown RBP11.06□□□□□ -0.64
CAST-220ENST00000508117 GJA9P57773 515 aa11.06□□□□□ -0.64
CAST-220ENST00000508117 ICA1Q05084 483 aa11.06□□□□□ -0.64
CAST-220ENST00000508117 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.06□□□□□ -0.64
CAST-220ENST00000508117 SPICE1Q8N0Z3 855 aa11.06□□□□□ -0.64
CAST-220ENST00000508117 REPS2Q8NFH8 660 aa11.06□□□□□ -0.64
CAST-220ENST00000508117 CCDC17Q96LX7 622 aa11.06□□□□□ -0.64
CAST-220ENST00000508117 MFRPQ9BY79 579 aa11.06□□□□□ -0.64
CAST-220ENST00000508117 CRNKL1Q9BZJ0 848 aaKnown RBP11.06□□□□□ -0.64
CAST-220ENST00000508117 SPC25Q9HBM1 224 aa11.06□□□□□ -0.64
CAST-220ENST00000508117 MCM9Q9NXL9 1143 aa11.06□□□□□ -0.64
CAST-220ENST00000508117 PPP1R9AQ9ULJ8 1098 aa11.06□□□□□ -0.64
CAST-220ENST00000508117 YBX2Q9Y2T7 364 aaKnown RBP11.06□□□□□ -0.64
CAST-220ENST00000508117 NOP58Q9Y2X3 529 aaKnown RBP11.06□□□□□ -0.64
CAST-220ENST00000508117 XIRP2A4UGR9 3374 aa11.05□□□□□ -0.64
CAST-220ENST00000508117 MAGEB6P1A0A0J9YX57 407 aa11.05□□□□□ -0.64
CAST-220ENST00000508117 MYADML2A6NDP7 307 aa11.05□□□□□ -0.64
CAST-220ENST00000508117 GPR37L1O60883 481 aa11.05□□□□□ -0.64
CAST-220ENST00000508117 TMEM31Q5JXX7 168 aa11.05□□□□□ -0.64
CAST-220ENST00000508117 SLC43A3Q8NBI5 491 aa11.05□□□□□ -0.64
CAST-220ENST00000508117 ABHD16BQ9H3Z7 469 aa11.05□□□□□ -0.64
CAST-220ENST00000508117 DCP1AQ9NPI6 582 aaPredicted RBP11.05□□□□□ -0.64
CAST-220ENST00000508117 COG5Q9UP83 839 aa11.05□□□□□ -0.64
CAST-220ENST00000508117 PCDHA11Q9Y5I1 949 aa11.05□□□□□ -0.64
CAST-220ENST00000508117 MCM3APO60318 1980 aa11.05□□□□□ -0.64
CAST-220ENST00000508117 IPO8O15397 1037 aaKnown RBP11.04□□□□□ -0.64
CAST-220ENST00000508117 SURF6O75683 361 aaKnown RBP11.04□□□□□ -0.64
CAST-220ENST00000508117 C6orf222P0C671 652 aaPredicted RBP11.04□□□□□ -0.64
CAST-220ENST00000508117 AKR1B1P15121 316 aa11.04□□□□□ -0.64
CAST-220ENST00000508117 CYP2C18P33260 490 aa11.04□□□□□ -0.64
CAST-220ENST00000508117 KCNQ1P51787 676 aa11.04□□□□□ -0.64
CAST-220ENST00000508117 ATP8B2P98198 1209 aa11.04□□□□□ -0.64
CAST-220ENST00000508117 TFF2Q03403 129 aa11.04□□□□□ -0.64
CAST-220ENST00000508117 OS9Q13438 667 aaPredicted RBP11.04□□□□□ -0.64
CAST-220ENST00000508117 ACVR2BQ13705 512 aa11.04□□□□□ -0.64
CAST-220ENST00000508117 TTF1Q15361 905 aaPredicted RBP11.04□□□□□ -0.64
CAST-220ENST00000508117 EAF2Q96CJ1 260 aaPredicted RBP11.04□□□□□ -0.64
CAST-220ENST00000508117 TEX13BQ9BXU2 312 aa11.04□□□□□ -0.64
CAST-220ENST00000508117 PPP1R12CQ9BZL4 782 aa11.04□□□□□ -0.64
CAST-220ENST00000508117 EPHX3Q9H6B9 360 aa11.04□□□□□ -0.64
CAST-220ENST00000508117 ANTXR1Q9H6X2 564 aa11.04□□□□□ -0.64
CAST-220ENST00000508117 TLR7Q9NYK1 1049 aaKnown RBP11.04□□□□□ -0.64
CAST-220ENST00000508117 APBB1O00213 710 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 ATP2A1O14983 1001 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 CTAGE5O15320 804 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 TLL1O43897 1013 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 CABYRO75952 493 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 TRIM27P14373 513 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
CAST-220ENST00000508117 CCDC144BQ3MJ40 725 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 GNASQ5JWF2 1037 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 PPP2R2DQ66LE6 453 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 RPUSD2Q8IZ73 545 aaKnown RBP11.03□□□□□ -0.64
CAST-220ENST00000508117 VTI1AQ96AJ9 217 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 DDX11Q96FC9 970 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 HIPK3Q9H422 1215 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 KANSL2Q9H9L4 492 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 GOPCQ9HD26 462 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 FBXO28Q9NVF7 368 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
CAST-220ENST00000508117 ZHX1Q9UKY1 873 aaPredicted RBP11.03□□□□□ -0.64
CAST-220ENST00000508117 MTCH2Q9Y6C9 303 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 SLC4A7Q9Y6M7 1214 aa11.03□□□□□ -0.64
CAST-220ENST00000508117 LRRC37A2A6NM11 1700 aa11.02□□□□□ -0.65
CAST-220ENST00000508117 ADCY6O43306 1168 aa11.02□□□□□ -0.65
CAST-220ENST00000508117 GTPBP6O43824 516 aaPredicted RBP11.02□□□□□ -0.65
CAST-220ENST00000508117 PFKMP08237 780 aa11.02□□□□□ -0.65
CAST-220ENST00000508117 EEF2P13639 858 aaKnown RBP11.02□□□□□ -0.65
CAST-220ENST00000508117 PDE6AP16499 860 aa11.02□□□□□ -0.65
CAST-220ENST00000508117 SLC9C2Q5TAH2 1124 aa11.02□□□□□ -0.65
CAST-220ENST00000508117 OTOP2Q7RTS6 562 aa11.02□□□□□ -0.65
CAST-220ENST00000508117 CLEC10AQ8IUN9 316 aa11.02□□□□□ -0.65
CAST-220ENST00000508117 CCDC8Q9H0W5 538 aaPredicted RBP11.02□□□□□ -0.65
CAST-220ENST00000508117 ATP8A2Q9NTI2 1148 aa11.02□□□□□ -0.65
CAST-220ENST00000508117 BRWD1Q9NSI6 2320 aa11.01□□□□□ -0.65
CAST-220ENST00000508117 SNRNP48Q6IEG0 339 aaKnown RBP11.01□□□□□ -0.65
CAST-220ENST00000508117 SDR42E1Q8WUS8 393 aa11.01□□□□□ -0.65
CAST-220ENST00000508117 DYNLL2Q96FJ2 89 aa11.01□□□□□ -0.65
CAST-220ENST00000508117 FGD4Q96M96 766 aa11.01□□□□□ -0.65
CAST-220ENST00000508117 SLF1Q9BQI6 1058 aa11.01□□□□□ -0.65
CAST-220ENST00000508117 NOC4LQ9BVI4 516 aaKnown RBP11.01□□□□□ -0.65
CAST-220ENST00000508117 KATNBL1Q9H079 304 aa11.01□□□□□ -0.65
CAST-220ENST00000508117 C11orf16Q9NQ32 467 aa11.01□□□□□ -0.65
CAST-220ENST00000508117 RIPK3Q9Y572 518 aa11.01□□□□□ -0.65
CAST-220ENST00000508117 GREB1LQ9C091 1923 aaPredicted RBP11.01□□□□□ -0.65
CAST-220ENST00000508117 BAZ2AQ9UIF9 1905 aaKnown RBP11.01□□□□□ -0.65
CAST-220ENST00000508117 TCRBV5S4A2TA0A5A2 114 aa11□□□□□ -0.65
CAST-220ENST00000508117 POTEB3A0JP26 581 aa11□□□□□ -0.65
CAST-220ENST00000508117 CYP2D6P10635 497 aa11□□□□□ -0.65
CAST-220ENST00000508117 ATP2A2P16615 1042 aaKnown RBP11□□□□□ -0.65
CAST-220ENST00000508117 CDK8P49336 464 aa11□□□□□ -0.65
CAST-220ENST00000508117 RABGGTBP53611 331 aa11□□□□□ -0.65
CAST-220ENST00000508117 ITGA7Q13683 1181 aa11□□□□□ -0.65
CAST-220ENST00000508117 SKIV2LQ15477 1246 aaKnown RBP11□□□□□ -0.65
CAST-220ENST00000508117 TMEM67Q5HYA8 995 aa11□□□□□ -0.65
CAST-220ENST00000508117 FAM83BQ5T0W9 1011 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms