RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 FAM184BQ9ULE4 1060 aa13.1□□□□□ -0.31
PTPN13-207ENST00000508063 CCDC171Q6TFL3 1326 aa13.1□□□□□ -0.31
PTPN13-207ENST00000508063 A0A0D9SFI3 127 aa13.09□□□□□ -0.31
PTPN13-207ENST00000508063 HIP1O00291 1037 aa13.09□□□□□ -0.31
PTPN13-207ENST00000508063 ZNF865P0CJ78 1059 aaPredicted RBP13.09□□□□□ -0.31
PTPN13-207ENST00000508063 HSPD1P10809 573 aaKnown RBP13.09□□□□□ -0.31
PTPN13-207ENST00000508063 ADCYAP1R1P41586 468 aa13.09□□□□□ -0.31
PTPN13-207ENST00000508063 NOVP48745 357 aa13.09□□□□□ -0.31
PTPN13-207ENST00000508063 NT5C2P49902 561 aa13.09□□□□□ -0.31
PTPN13-207ENST00000508063 RTP1P59025 263 aa13.09□□□□□ -0.31
PTPN13-207ENST00000508063 NUCB1Q02818 461 aa13.09□□□□□ -0.31
PTPN13-207ENST00000508063 NMIQ13287 307 aaPredicted RBP13.09□□□□□ -0.31
PTPN13-207ENST00000508063 DCAF4Q8WV16 495 aa13.09□□□□□ -0.31
PTPN13-207ENST00000508063 ACAD9Q9H845 621 aa13.09□□□□□ -0.31
PTPN13-207ENST00000508063 IL17RBQ9NRM6 502 aa13.09□□□□□ -0.31
PTPN13-207ENST00000508063 ATP11BQ9Y2G3 1177 aa13.09□□□□□ -0.31
PTPN13-207ENST00000508063 RANBP2P49792 3224 aaKnown RBP13.09□□□□□ -0.31
PTPN13-207ENST00000508063 SDSP20132 328 aa13.08□□□□□ -0.32
PTPN13-207ENST00000508063 LRIT3Q3SXY7 679 aa13.08□□□□□ -0.32
PTPN13-207ENST00000508063 RRP12Q5JTH9 1297 aaKnown RBP13.08□□□□□ -0.32
PTPN13-207ENST00000508063 C1orf53Q5VUE5 145 aa13.08□□□□□ -0.32
PTPN13-207ENST00000508063 GPR153Q6NV75 609 aa13.08□□□□□ -0.32
PTPN13-207ENST00000508063 TSEN34Q9BSV6 310 aaKnown RBP13.08□□□□□ -0.32
PTPN13-207ENST00000508063 ABHD16BQ9H3Z7 469 aa13.08□□□□□ -0.32
PTPN13-207ENST00000508063 RNF41Q9H4P4 317 aaPredicted RBP13.08□□□□□ -0.32
PTPN13-207ENST00000508063 INCENPQ9NQS7 918 aa13.08□□□□□ -0.32
PTPN13-207ENST00000508063 TCP11L1Q9NUJ3 509 aa13.08□□□□□ -0.32
PTPN13-207ENST00000508063 ZHX1Q9UKY1 873 aaPredicted RBP13.08□□□□□ -0.32
PTPN13-207ENST00000508063 PHF24Q9UPV7 400 aa13.08□□□□□ -0.32
PTPN13-207ENST00000508063 SMCHD1A6NHR9 2005 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 POTEB2H3BUK9 544 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 HAX1O00165 279 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 NMT2O60551 498 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 SNAI1O95863 264 aaPredicted RBP13.07□□□□□ -0.32
PTPN13-207ENST00000508063 PGK1P00558 417 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 IGHDP01880 384 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 TOP1P11387 765 aaKnown RBP13.07□□□□□ -0.32
PTPN13-207ENST00000508063 TAL1P17542 331 aaPredicted RBP13.07□□□□□ -0.32
PTPN13-207ENST00000508063 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
PTPN13-207ENST00000508063 MDM2Q00987 491 aaPredicted RBP13.07□□□□□ -0.32
PTPN13-207ENST00000508063 ACVR2BQ13705 512 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 SNX17Q15036 470 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 MFSD6Q6ZSS7 791 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 KCTD1Q719H9 257 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 PLEKHM2Q8IWE5 1019 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 EXOC6Q8TAG9 804 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 FERMT2Q96AC1 680 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 TTC14Q96N46 770 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 SPC25Q9HBM1 224 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 HOMER2Q9NSB8 354 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 DIAPH3Q9NSV4 1193 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 RNF146Q9NTX7 359 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.07□□□□□ -0.32
PTPN13-207ENST00000508063 PRR12Q9ULL5 1215 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 DNAH12Q6ZR08 3092 aa13.07□□□□□ -0.32
PTPN13-207ENST00000508063 MOXD2PA6NHM9 499 aa13.06□□□□□ -0.32
PTPN13-207ENST00000508063 ZNF213O14771 459 aa13.06□□□□□ -0.32
PTPN13-207ENST00000508063 DUSP11O75319 330 aaKnown RBP13.06□□□□□ -0.32
PTPN13-207ENST00000508063 ALAS1P13196 640 aa13.06□□□□□ -0.32
PTPN13-207ENST00000508063 TRIM60Q495X7 471 aa13.06□□□□□ -0.32
PTPN13-207ENST00000508063 AKNAD1Q5T1N1 836 aa13.06□□□□□ -0.32
PTPN13-207ENST00000508063 ZNF589Q86UQ0 364 aaPredicted RBP13.06□□□□□ -0.32
PTPN13-207ENST00000508063 NUP133Q8WUM0 1156 aa13.06□□□□□ -0.32
PTPN13-207ENST00000508063 CHMP4CQ96CF2 233 aa13.06□□□□□ -0.32
PTPN13-207ENST00000508063 AGBL1Q96MI9 1066 aa13.06□□□□□ -0.32
PTPN13-207ENST00000508063 TRERF1Q96PN7 1200 aa13.06□□□□□ -0.32
PTPN13-207ENST00000508063 PNMA2Q9UL42 364 aa13.06□□□□□ -0.32
PTPN13-207ENST00000508063 MTMR7Q9Y216 660 aa13.06□□□□□ -0.32
PTPN13-207ENST00000508063 ASB14A6NK59 587 aa13.05□□□□□ -0.32
PTPN13-207ENST00000508063 SOX1O00570 391 aaPredicted RBP13.05□□□□□ -0.32
PTPN13-207ENST00000508063 ADAMTS4O75173 837 aa13.05□□□□□ -0.32
PTPN13-207ENST00000508063 HAND2P61296 217 aa13.05□□□□□ -0.32
PTPN13-207ENST00000508063 CCDC178Q5BJE1 867 aa13.05□□□□□ -0.32
PTPN13-207ENST00000508063 CCDC174Q6PII3 467 aa13.05□□□□□ -0.32
PTPN13-207ENST00000508063 ARMCX2Q7L311 632 aa13.05□□□□□ -0.32
PTPN13-207ENST00000508063 ESR2Q92731 530 aa13.05□□□□□ -0.32
PTPN13-207ENST00000508063 LRCH3Q96II8 777 aa13.05□□□□□ -0.32
PTPN13-207ENST00000508063 TMEM47Q9BQJ4 181 aa13.05□□□□□ -0.32
PTPN13-207ENST00000508063 A1CFQ9NQ94 594 aaKnown RBP13.05□□□□□ -0.32
PTPN13-207ENST00000508063 PRDM5Q9NQX1 630 aaPredicted RBP13.05□□□□□ -0.32
PTPN13-207ENST00000508063 CCPG1Q9ULG6 757 aa13.05□□□□□ -0.32
PTPN13-207ENST00000508063 TACC3Q9Y6A5 838 aa13.05□□□□□ -0.32
PTPN13-207ENST00000508063 ZNF536O15090 1300 aa13.05□□□□□ -0.32
PTPN13-207ENST00000508063 SYNRGQ9UMZ2 1314 aa13.05□□□□□ -0.32
PTPN13-207ENST00000508063 A0A1W2PQ45 241 aaPredicted RBP13.04□□□□□ -0.32
PTPN13-207ENST00000508063 A0A1W2PQY0 241 aa13.04□□□□□ -0.32
PTPN13-207ENST00000508063 ICAM1P05362 532 aa13.04□□□□□ -0.32
PTPN13-207ENST00000508063 ACLYP53396 1101 aa13.04□□□□□ -0.32
PTPN13-207ENST00000508063 CCDC144BQ3MJ40 725 aa13.04□□□□□ -0.32
PTPN13-207ENST00000508063 SYDE2Q5VT97 1194 aa13.04□□□□□ -0.32
PTPN13-207ENST00000508063 CWC27Q6UX04 472 aaKnown RBP13.04□□□□□ -0.32
PTPN13-207ENST00000508063 BTNL9Q6UXG8 535 aa13.04□□□□□ -0.32
PTPN13-207ENST00000508063 CCDC144CPQ8IYA2 1237 aa13.04□□□□□ -0.32
PTPN13-207ENST00000508063 FAM133AQ8N9E0 248 aa13.04□□□□□ -0.32
PTPN13-207ENST00000508063 PCSK9Q8NBP7 692 aaKnown RBP13.04□□□□□ -0.32
PTPN13-207ENST00000508063 RANBP17Q9H2T7 1088 aaKnown RBP13.04□□□□□ -0.32
PTPN13-207ENST00000508063 STARD7Q9NQZ5 370 aa13.04□□□□□ -0.32
PTPN13-207ENST00000508063 CTNNA3Q9UI47 895 aa13.04□□□□□ -0.32
PTPN13-207ENST00000508063 C6orf222P0C671 652 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms