RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 SH3RF1Q7Z6J0 888 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 RETREG3Q86VR2 466 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 SPATS2Q86XZ4 545 aaKnown RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 RAB11FIP4Q86YS3 637 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 FAM114A1Q8IWE2 563 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 EFCAB13Q8IY85 973 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 C10orf67Q8IYJ2 551 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 TRMT44Q8IYL2 757 aaKnown RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 CRACR2BQ8N4Y2 399 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 NBPF15Q8N660 670 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 RETREG2Q8NC44 543 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 OR8K1Q8NGG5 319 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 ESR2Q92731 530 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 SMARCC1Q92922 1105 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 CCDC47Q96A33 483 aaKnown RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 EMID1Q96A84 441 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 PAGE5Q96GU1 130 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 AIFM3Q96NN9 605 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 STRBPQ96SI9 672 aaKnown RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 ORAI2Q96SN7 254 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 PUS3Q9BZE2 481 aaKnown RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 CSRNP2Q9H175 543 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 DEF6Q9H4E7 631 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZBTB3Q9H5J0 574 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 YY1AP1Q9H869 796 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZCCHC17Q9NP64 241 aaKnown RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 CNNM1Q9NRU3 951 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 SAMSN1Q9NSI8 373 aaKnown RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 GJB4Q9NTQ9 266 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 ABHD10Q9NUJ1 306 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 MAGEC2Q9UBF1 373 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 FAN1Q9Y2M0 1017 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 MYH7P12883 1935 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 TIAM2Q8IVF5 1701 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZNF142P52746 1687 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 PNPLA7Q6ZV29 1317 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 LRP6O75581 1613 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 A0A087WUV0 522 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 SHTN1A0MZ66 631 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 FOXN1O15353 648 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 PRPF3O43395 683 aaKnown RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 DXOO77932 396 aaKnown RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 DDAH1O94760 285 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 PDE8BO95263 885 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 NDUFA10O95299 355 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 CPP00450 1065 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 GYPCP04921 128 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 RHOXF2BP0C7M4 288 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 KRT9P35527 623 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 GJA5P36382 358 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 LONP1P36776 959 aaKnown RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 MCAMP43121 646 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 TDO2P48775 406 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 TOB1P50616 345 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 COPB1P53618 953 aaKnown RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 CTSWP56202 376 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 CORO7P57737 925 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 VSNL1P62760 191 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 AMPD2Q01433 879 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 ITIH3Q06033 890 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZNF658Q5TYW1 1059 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 RRAGBQ5VZM2 374 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 ARL6IP4Q66PJ3 421 aaKnown RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 WWC2Q6AWC2 1192 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 KLHL10Q6JEL2 608 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 APTXQ7Z2E3 356 aaKnown RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 TRAPPC11Q7Z392 1133 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 KIAA1328Q86T90 577 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 AMOTL1Q8IY63 956 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 CCDC170Q8IYT3 715 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 IFNL3Q8IZI9 196 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZNF654Q8IZM8 581 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 FNBP4Q8N3X1 1017 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 FANCBQ8NB91 859 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 FAM76AQ8TAV0 307 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZCRB1Q8TBF4 217 aaKnown RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 CAGE1Q8TC20 777 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 CPLX3Q8WVH0 158 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 LPIN2Q92539 896 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 SYMPKQ92797 1274 aaKnown RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 RHOXF2Q9BQY4 288 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 EPC1Q9H2F5 836 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZSWIM4Q9H7M6 989 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 MAGEF1Q9HAY2 307 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 CABP5Q9NP86 173 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 TOMM22Q9NS69 142 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZSWIM5Q9P217 1185 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 PCDHGC3Q9UN70 934 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 LUC7L2Q9Y383 392 aaKnown RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 RIPOR2Q9Y4F9 1068 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 PCDHB6Q9Y5E3 794 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 SAR1BQ9Y6B6 198 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 EPN1Q9Y6I3 576 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 C1orf167Q5SNV9 1468 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 DCCP43146 1447 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 RIC1Q4ADV7 1423 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 TNS2Q63HR2 1409 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 TNS3Q68CZ2 1445 aa5.57□□□□□ -1.52
HMGB3P16-201ENST00000508037 ALS2Q96Q42 1657 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 GLI3P10071 1580 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms