RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 ATP1A3P13637 1013 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 TNFRSF8P28908 595 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 SCARF1Q14162 830 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 NAA25Q14CX7 972 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 BZW1Q7L1Q6 419 aaKnown RBP6.85□□□□□ -1.31
KDM3B-204ENST00000507996 TRAPPC11Q7Z392 1133 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 CCDC170Q8IYT3 715 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 FAM177A1Q8N128 213 aaPredicted RBP6.85□□□□□ -1.31
KDM3B-204ENST00000507996 VGLL2Q8N8G2 317 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 RASSF8Q8NHQ8 419 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 EVI5LQ96CN4 794 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 ANKRD27Q96NW4 1050 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 GPR101Q96P66 508 aaPredicted RBP6.85□□□□□ -1.31
KDM3B-204ENST00000507996 SELENOOQ9BVL4 669 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 SUDS3Q9H7L9 328 aaPredicted RBP6.85□□□□□ -1.31
KDM3B-204ENST00000507996 GPR108Q9NPR9 543 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 ANAPC4Q9UJX5 808 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 TRPC6Q9Y210 931 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 ZNF609O15014 1411 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 COL4A1P02462 1669 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 SALL1Q9NSC2 1324 aa6.85□□□□□ -1.31
KDM3B-204ENST00000507996 TMEM232C9JQI7 657 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 ABLIM1O14639 778 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 SLC27A2O14975 620 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 YEATS4O95619 227 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 SLC3A2P08195 630 aaKnown RBP6.84□□□□□ -1.31
KDM3B-204ENST00000507996 PDHBP11177 359 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 FERP16591 822 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 ZNF18P17022 549 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 ZAP70P43403 619 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 ROR2Q01974 943 aaKnown RBP6.84□□□□□ -1.31
KDM3B-204ENST00000507996 APBA1Q02410 837 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 GRAPQ13588 217 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 CCDC102BQ68D86 513 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 CAPRIN2Q6IMN6 1127 aaKnown RBP6.84□□□□□ -1.31
KDM3B-204ENST00000507996 CCNI2Q6ZMN8 369 aaPredicted RBP6.84□□□□□ -1.31
KDM3B-204ENST00000507996 ZNF572Q7Z3I7 529 aaPredicted RBP6.84□□□□□ -1.31
KDM3B-204ENST00000507996 SPDYE1Q8NFV5 336 aaPredicted RBP6.84□□□□□ -1.31
KDM3B-204ENST00000507996 TRIM58Q8NG06 486 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 GRAPLQ8TC17 118 aaPredicted RBP6.84□□□□□ -1.31
KDM3B-204ENST00000507996 ZNF473Q8WTR7 871 aaKnown RBP6.84□□□□□ -1.31
KDM3B-204ENST00000507996 USP28Q96RU2 1077 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 PAG1Q9NWQ8 432 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 FAM184BQ9ULE4 1060 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 PCDHA7Q9UN72 937 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 JAG2Q9Y219 1238 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 PCDHGC5Q9Y5F6 944 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 PCDHGA4Q9Y5G9 962 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 MED23Q9ULK4 1368 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 A0A087WWV3 80 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 HIP1O00291 1037 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 SERPINC1P01008 464 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 LMOD1P29536 600 aaPredicted RBP6.84□□□□□ -1.31
KDM3B-204ENST00000507996 CHRNA5P30532 468 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 GBP2P32456 591 aaPredicted RBP6.84□□□□□ -1.31
KDM3B-204ENST00000507996 NNTQ13423 1086 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 KCNB1Q14721 858 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 CFAP100Q494V2 611 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 CCDC38Q502W7 563 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 BLOC1S2Q6QNY1 142 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 MTHFD1LQ6UB35 978 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 OLFM4Q6UX06 510 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 ZNF662Q6ZS27 426 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 CCDC125Q86Z20 511 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 KCNV2Q8TDN2 545 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 CNKSR1Q969H4 720 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 CCDC51Q96ER9 411 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 FAM227BQ96M60 508 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 MOV10L1Q9BXT6 1211 aaKnown RBP6.84□□□□□ -1.31
KDM3B-204ENST00000507996 EHD4Q9H223 541 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 C15orf41Q9Y2V0 281 aa6.84□□□□□ -1.31
KDM3B-204ENST00000507996 RBM8AQ9Y5S9 174 aaKnown RBP6.84□□□□□ -1.31
KDM3B-204ENST00000507996 CDKL5O76039 1030 aa6.84□□□□□ -1.32
KDM3B-204ENST00000507996 FAM107AO95990 144 aa6.84□□□□□ -1.32
KDM3B-204ENST00000507996 KLRK1P26718 216 aa6.84□□□□□ -1.32
KDM3B-204ENST00000507996 NDUFA8P51970 172 aa6.84□□□□□ -1.32
KDM3B-204ENST00000507996 ATP2B2Q01814 1243 aa6.84□□□□□ -1.32
KDM3B-204ENST00000507996 ITIH3Q06033 890 aa6.84□□□□□ -1.32
KDM3B-204ENST00000507996 KARSQ15046 597 aaKnown RBP6.84□□□□□ -1.32
KDM3B-204ENST00000507996 PTGISQ16647 500 aa6.84□□□□□ -1.32
KDM3B-204ENST00000507996 ATL2Q8NHH9 583 aa6.84□□□□□ -1.32
KDM3B-204ENST00000507996 UPF1Q92900 1129 aaKnown RBP eCLIP6.84□□□□□ -1.32
KDM3B-204ENST00000507996 ZBTB10Q96DT7 871 aa6.84□□□□□ -1.32
KDM3B-204ENST00000507996 ALS2CR12Q96Q35 445 aa6.84□□□□□ -1.32
KDM3B-204ENST00000507996 HAUS7Q99871 368 aa6.84□□□□□ -1.32
KDM3B-204ENST00000507996 BRIP1Q9BX63 1249 aa6.84□□□□□ -1.32
KDM3B-204ENST00000507996 ZSWIM4Q9H7M6 989 aa6.84□□□□□ -1.32
KDM3B-204ENST00000507996 SAMM50Q9Y512 469 aa6.84□□□□□ -1.32
KDM3B-204ENST00000507996 C6orf229H3BNL8 230 aa6.83□□□□□ -1.32
KDM3B-204ENST00000507996 H3BQV1 296 aa6.83□□□□□ -1.32
KDM3B-204ENST00000507996 PSMD14O00487 310 aa6.83□□□□□ -1.32
KDM3B-204ENST00000507996 IDH1O75874 414 aaKnown RBP6.83□□□□□ -1.32
KDM3B-204ENST00000507996 LSP1P33241 339 aa6.83□□□□□ -1.32
KDM3B-204ENST00000507996 PDE6BP35913 854 aa6.83□□□□□ -1.32
KDM3B-204ENST00000507996 MCAMP43121 646 aa6.83□□□□□ -1.32
KDM3B-204ENST00000507996 CCNG1P51959 295 aa6.83□□□□□ -1.32
KDM3B-204ENST00000507996 NMIQ13287 307 aaPredicted RBP6.83□□□□□ -1.32
KDM3B-204ENST00000507996 BLMHQ13867 455 aa6.83□□□□□ -1.32
KDM3B-204ENST00000507996 CCDC96Q2M329 555 aa6.83□□□□□ -1.32
KDM3B-204ENST00000507996 CAVIN4Q5BKX8 364 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms