RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 PDHBP11177 359 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 PLCG2P16885 1265 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 TCP10Q12799 353 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 TBC1D22AQ8WUA7 517 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 ATRIPQ8WXE1 791 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 ZNF622Q969S3 477 aaKnown RBP eCLIP16.38■□□□□ 0.211e-8■■□□□ 13.5
DDX41-208ENST00000507955 BAG1Q99933 345 aaPredicted RBP16.38■□□□□ 0.21
DDX41-208ENST00000507955 DISC1Q9NRI5 854 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 A0A1B0GTH6 734 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 RPN1P04843 607 aaKnown RBP16.38■□□□□ 0.21
DDX41-208ENST00000507955 SLC16A2P36021 539 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 LONP1P36776 959 aaKnown RBP16.38■□□□□ 0.21
DDX41-208ENST00000507955 PRCPP42785 496 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 KCNJ6P48051 423 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 TTBK2Q6IQ55 1244 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 REXO1L1PQ8IX06 675 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 CCDC148Q8NFR7 591 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 RRP36Q96EU6 259 aaKnown RBP16.38■□□□□ 0.21
DDX41-208ENST00000507955 CCDC34Q96HJ3 373 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 ZMYND12Q9H0C1 365 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 VPS16Q9H269 839 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 ZNF446Q9NWS9 450 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 MTMR4Q9NYA4 1195 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 DNAI1Q9UI46 699 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 SRCAPQ6ZRS2 3230 aa16.38■□□□□ 0.21
DDX41-208ENST00000507955 ADAMTSL1Q8N6G6 1762 aa16.37■□□□□ 0.21
DDX41-208ENST00000507955 MPHOSPH10O00566 681 aaKnown RBP16.37■□□□□ 0.21
DDX41-208ENST00000507955 TECP42680 631 aa16.37■□□□□ 0.21
DDX41-208ENST00000507955 PMS1P54277 932 aaKnown RBP16.37■□□□□ 0.21
DDX41-208ENST00000507955 RBL2Q08999 1139 aa16.37■□□□□ 0.21
DDX41-208ENST00000507955 ERCC6LQ2NKX8 1250 aa16.37■□□□□ 0.21
DDX41-208ENST00000507955 ARL6IP4Q66PJ3 421 aaKnown RBP16.37■□□□□ 0.21
DDX41-208ENST00000507955 TBCKQ8TEA7 893 aa16.37■□□□□ 0.21
DDX41-208ENST00000507955 GJA10Q969M2 543 aa16.37■□□□□ 0.21
DDX41-208ENST00000507955 ZBTB22O15209 634 aa16.37■□□□□ 0.21
DDX41-208ENST00000507955 GTPBP6O43824 516 aaPredicted RBP16.37■□□□□ 0.21
DDX41-208ENST00000507955 UBA7P41226 1012 aa16.37■□□□□ 0.21
DDX41-208ENST00000507955 CCDC178Q5BJE1 867 aa16.37■□□□□ 0.21
DDX41-208ENST00000507955 CDKAL1Q5VV42 579 aa16.37■□□□□ 0.21
DDX41-208ENST00000507955 KIAA0825Q8IV33 1275 aa16.37■□□□□ 0.21
DDX41-208ENST00000507955 SPZ1Q9BXG8 430 aa16.37■□□□□ 0.21
DDX41-208ENST00000507955 ADD3Q9UEY8 706 aaKnown RBP16.37■□□□□ 0.21
DDX41-208ENST00000507955 SEC63Q9UGP8 760 aaKnown RBP16.37■□□□□ 0.21
DDX41-208ENST00000507955 SOWAHDA6NJG2 315 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 G3V3G9 751 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 KIF2AO00139 706 aaPredicted RBP16.36■□□□□ 0.21
DDX41-208ENST00000507955 APBA3O96018 575 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 DCAF8Q5TAQ9 597 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 CDC42EP5Q6NZY7 148 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 NELFBQ8WX92 580 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 COA1Q9GZY4 146 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 RNF225M0QZC1 329 aaPredicted RBP16.36■□□□□ 0.21
DDX41-208ENST00000507955 NRDCO43847 1150 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 GABPAQ06546 454 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 TRIM65Q6PJ69 517 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 POTEDQ86YR6 584 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 SLF2Q8IX21 1173 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 IGSF22Q8N9C0 903 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 HPS3Q969F9 1004 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 TAB2Q9NYJ8 693 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 PPP2R2CQ9Y2T4 447 aa16.36■□□□□ 0.21
DDX41-208ENST00000507955 KCTD1Q719H9 257 aa16.35■□□□□ 0.21
DDX41-208ENST00000507955 DAGLBQ8NCG7 672 aa16.35■□□□□ 0.21
DDX41-208ENST00000507955 IRX2Q9BZI1 471 aaPredicted RBP16.35■□□□□ 0.21
DDX41-208ENST00000507955 FAM53CQ9NYF3 392 aa16.35■□□□□ 0.21
DDX41-208ENST00000507955 ANKRD31Q8N7Z5 1873 aa16.35■□□□□ 0.21
DDX41-208ENST00000507955 MYO1BO43795 1136 aa16.35■□□□□ 0.21
DDX41-208ENST00000507955 TXLNAP40222 546 aa16.35■□□□□ 0.21
DDX41-208ENST00000507955 KRT31Q15323 416 aa16.35■□□□□ 0.21
DDX41-208ENST00000507955 APOBEC3HQ6NTF7 200 aaKnown RBP16.35■□□□□ 0.21
DDX41-208ENST00000507955 PLCG1P19174 1290 aa16.34■□□□□ 0.21
DDX41-208ENST00000507955 CASP14P31944 242 aa16.34■□□□□ 0.21
DDX41-208ENST00000507955 TXKP42681 527 aa16.34■□□□□ 0.21
DDX41-208ENST00000507955 NONOQ15233 471 aaKnown RBP eCLIP16.34■□□□□ 0.21
DDX41-208ENST00000507955 UBE2SQ16763 222 aa16.34■□□□□ 0.21
DDX41-208ENST00000507955 SOGA3Q5TF21 947 aa16.34■□□□□ 0.21
DDX41-208ENST00000507955 C6orf50Q9HD87 102 aa16.34■□□□□ 0.21
DDX41-208ENST00000507955 SERPINB13Q9UIV8 391 aa16.34■□□□□ 0.21
DDX41-208ENST00000507955 EDIL3O43854 480 aa16.34■□□□□ 0.21
DDX41-208ENST00000507955 SHMT1P34896 483 aa16.34■□□□□ 0.21
DDX41-208ENST00000507955 FXR1P51114 621 aaKnown RBP eCLIP16.34■□□□□ 0.21
DDX41-208ENST00000507955 PAK1Q13153 545 aa16.34■□□□□ 0.21
DDX41-208ENST00000507955 ZNF658Q5TYW1 1059 aaPredicted RBP16.34■□□□□ 0.21
DDX41-208ENST00000507955 ST7Q9NRC1 585 aa16.34■□□□□ 0.21
DDX41-208ENST00000507955 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.34■□□□□ 0.216e-7■■■□□ 16
DDX41-208ENST00000507955 ARHGAP6O43182 974 aa16.33■□□□□ 0.21
DDX41-208ENST00000507955 PPP1R11O60927 126 aaPredicted RBP16.33■□□□□ 0.21
DDX41-208ENST00000507955 TDP2O95551 362 aa16.33■□□□□ 0.21
DDX41-208ENST00000507955 ETF1P62495 437 aaKnown RBP16.33■□□□□ 0.21
DDX41-208ENST00000507955 LZTS2Q9BRK4 669 aa16.33■□□□□ 0.21
DDX41-208ENST00000507955 N4BP3O15049 544 aa16.33■□□□□ 0.2
DDX41-208ENST00000507955 SLC37A4O43826 429 aa16.33■□□□□ 0.2
DDX41-208ENST00000507955 NPR1P16066 1061 aa16.33■□□□□ 0.2
DDX41-208ENST00000507955 H2AFXP16104 143 aaPredicted RBP16.33■□□□□ 0.2
DDX41-208ENST00000507955 RBM5P52756 815 aaKnown RBP eCLIP16.33■□□□□ 0.2
DDX41-208ENST00000507955 NEK8Q86SG6 692 aa16.33■□□□□ 0.2
DDX41-208ENST00000507955 CABP7Q86V35 215 aa16.33■□□□□ 0.2
DDX41-208ENST00000507955 REXO1Q8N1G1 1221 aaKnown RBP16.33■□□□□ 0.2
DDX41-208ENST00000507955 NLGN1Q8N2Q7 840 aa16.33■□□□□ 0.2
DDX41-208ENST00000507955 WDR24Q96S15 920 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms