RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 RHPN1Q8TCX5 695 aa8.41□□□□□ -1.06
CLCN3-206ENST00000507875 UBA5Q9GZZ9 404 aa8.41□□□□□ -1.06
CLCN3-206ENST00000507875 CARMIL3Q8ND23 1372 aa8.4□□□□□ -1.06
CLCN3-206ENST00000507875 GIPC1O14908 333 aa8.4□□□□□ -1.06
CLCN3-206ENST00000507875 ZNF500O60304 480 aaPredicted RBP8.4□□□□□ -1.06
CLCN3-206ENST00000507875 NTSR2O95665 410 aa8.4□□□□□ -1.06
CLCN3-206ENST00000507875 GSTT1P30711 240 aa8.4□□□□□ -1.06
CLCN3-206ENST00000507875 IFRD2Q12894 506 aaPredicted RBP8.4□□□□□ -1.06
CLCN3-206ENST00000507875 TTF1Q15361 905 aaPredicted RBP8.4□□□□□ -1.06
CLCN3-206ENST00000507875 THNSL2Q86YJ6 484 aa8.4□□□□□ -1.06
CLCN3-206ENST00000507875 EGFL6Q8IUX8 553 aa8.4□□□□□ -1.06
CLCN3-206ENST00000507875 CCDC113Q9H0I3 377 aa8.4□□□□□ -1.06
CLCN3-206ENST00000507875 NIP7Q9Y221 180 aaKnown RBP eCLIP8.4□□□□□ -1.06
CLCN3-206ENST00000507875 UBN2Q6ZU65 1347 aa8.4□□□□□ -1.07
CLCN3-206ENST00000507875 SALL3Q9BXA9 1300 aa8.4□□□□□ -1.07
CLCN3-206ENST00000507875 TK2O00142 265 aa8.4□□□□□ -1.07
CLCN3-206ENST00000507875 TFE3P19532 575 aaPredicted RBP8.4□□□□□ -1.07
CLCN3-206ENST00000507875 YY1P25490 414 aa8.4□□□□□ -1.07
CLCN3-206ENST00000507875 IL15P40933 162 aaPredicted RBP8.4□□□□□ -1.07
CLCN3-206ENST00000507875 CTSWP56202 376 aa8.4□□□□□ -1.07
CLCN3-206ENST00000507875 GRIN2CQ14957 1233 aa8.4□□□□□ -1.07
CLCN3-206ENST00000507875 LMBR1LQ6UX01 489 aa8.4□□□□□ -1.07
CLCN3-206ENST00000507875 CLASRPQ8N2M8 674 aaKnown RBP8.4□□□□□ -1.07
CLCN3-206ENST00000507875 EHBP1Q8NDI1 1231 aa8.4□□□□□ -1.07
CLCN3-206ENST00000507875 C8orf48Q96LL4 319 aa8.4□□□□□ -1.07
CLCN3-206ENST00000507875 TBC1D32Q96NH3 1257 aa8.4□□□□□ -1.07
CLCN3-206ENST00000507875 KCNQ5Q9NR82 932 aa8.4□□□□□ -1.07
CLCN3-206ENST00000507875 SHTN1A0MZ66 631 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 MEN1O00255 615 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 KATNA1O75449 491 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 VARSP26640 1264 aaKnown RBP8.39□□□□□ -1.07
CLCN3-206ENST00000507875 LSM11P83369 360 aaKnown RBP eCLIP8.39□□□□□ -1.07
CLCN3-206ENST00000507875 EXOSC10Q01780 885 aaKnown RBP8.39□□□□□ -1.07
CLCN3-206ENST00000507875 CCDC57Q2TAC2 916 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 TJAP1Q5JTD0 557 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 RASIP1Q5U651 963 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 SUSD4Q5VX71 490 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 SUV39H2Q9H5I1 410 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 TYW1Q9NV66 732 aaKnown RBP8.39□□□□□ -1.07
CLCN3-206ENST00000507875 ANKRD18BA2A2Z9 1011 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 MYCLP1P12525 358 aaPredicted RBP8.39□□□□□ -1.07
CLCN3-206ENST00000507875 SCP2P22307 547 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 PLA2G4AP47712 749 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 SF3B3Q15393 1217 aaKnown RBP8.39□□□□□ -1.07
CLCN3-206ENST00000507875 GPR162Q16538 588 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 CCDC152Q4G0S7 254 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 EPHA10Q5JZY3 1008 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 AIDAQ96BJ3 306 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 SUSD3Q96L08 255 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 OXCT2Q9BYC2 517 aaPredicted RBP8.39□□□□□ -1.07
CLCN3-206ENST00000507875 RBSNQ9H1K0 784 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 ZNF395Q9H8N7 513 aaPredicted RBP8.39□□□□□ -1.07
CLCN3-206ENST00000507875 ABCB6Q9NP58 842 aa8.39□□□□□ -1.07
CLCN3-206ENST00000507875 GNL3LQ9NVN8 582 aaKnown RBP8.39□□□□□ -1.07
CLCN3-206ENST00000507875 ABCC12Q96J65 1359 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 CCDC189A1A4V9 331 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 METTL12A8MUP2 240 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 EYA2O00167 538 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 ERC2O15083 957 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 SCGB1D2O95969 90 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 F13A1P00488 732 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 IFIT5Q13325 482 aaKnown RBP8.38□□□□□ -1.07
CLCN3-206ENST00000507875 RASGRF1Q13972 1273 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 PPP2R5EQ16537 467 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 SNAP47Q5SQN1 464 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 MSL1Q68DK7 614 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 CASC1Q6TDU7 716 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 GALNT12Q8IXK2 581 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 TTLL11Q8NHH1 800 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 ACTR10Q9NZ32 417 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 STRIP2Q9ULQ0 834 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 EXOC6BQ9Y2D4 811 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 TGFBR3LH3BV60 316 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 TSPAN6O43657 245 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 WDHD1O75717 1129 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-206ENST00000507875 GPTP24298 496 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 INPP5BP32019 993 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 MCM4P33991 863 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 LIG3P49916 1009 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 CLN3Q13286 438 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 UBE4AQ14139 1066 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 NFE2Q16621 373 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-206ENST00000507875 TTC22Q5TAA0 569 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 C6orf15Q6UXA7 325 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-206ENST00000507875 NKD1Q969G9 470 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 CDK15Q96Q40 435 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 NRBP1Q9UHY1 535 aa8.38□□□□□ -1.07
CLCN3-206ENST00000507875 PRPF3O43395 683 aaKnown RBP8.37□□□□□ -1.07
CLCN3-206ENST00000507875 MX1P20591 662 aa8.37□□□□□ -1.07
CLCN3-206ENST00000507875 PDE1AP54750 535 aa8.37□□□□□ -1.07
CLCN3-206ENST00000507875 BECN1Q14457 450 aa8.37□□□□□ -1.07
CLCN3-206ENST00000507875 CXorf38Q8TB03 319 aa8.37□□□□□ -1.07
CLCN3-206ENST00000507875 FAM89AQ96GI7 184 aa8.37□□□□□ -1.07
CLCN3-206ENST00000507875 CEP89Q96ST8 783 aa8.37□□□□□ -1.07
CLCN3-206ENST00000507875 EHD4Q9H223 541 aa8.37□□□□□ -1.07
CLCN3-206ENST00000507875 SALL4Q9UJQ4 1053 aa8.37□□□□□ -1.07
CLCN3-206ENST00000507875 PCDHB5Q9Y5E4 795 aa8.37□□□□□ -1.07
CLCN3-206ENST00000507875 MROH5Q6ZUA9 1318 aa8.37□□□□□ -1.07
CLCN3-206ENST00000507875 A0A087X0B3 334 aa8.37□□□□□ -1.07
CLCN3-206ENST00000507875 A0A1W2PP55 124 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms