RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 SMCR8Q8TEV9 937 aaPredicted RBP12.36□□□□□ -0.43
TRIM6-209ENST00000507320 PARK7Q99497 189 aaKnown RBP12.36□□□□□ -0.43
TRIM6-209ENST00000507320 SLC26A6Q9BXS9 759 aa12.36□□□□□ -0.43
TRIM6-209ENST00000507320 R3HDMLQ9H3Y0 253 aa12.36□□□□□ -0.43
TRIM6-209ENST00000507320 ZCCHC17Q9NP64 241 aaKnown RBP12.36□□□□□ -0.43
TRIM6-209ENST00000507320 BTBD7Q9P203 1132 aa12.36□□□□□ -0.43
TRIM6-209ENST00000507320 RBPJLQ9UBG7 517 aa12.36□□□□□ -0.43
TRIM6-209ENST00000507320 ADGRA2Q96PE1 1338 aa12.36□□□□□ -0.43
TRIM6-209ENST00000507320 PTPDC1A2A3K4 754 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 CNMDO75829 334 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 FDPSP14324 419 aaKnown RBP12.35□□□□□ -0.43
TRIM6-209ENST00000507320 TMEM132BQ14DG7 1078 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 PKN1Q16512 942 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 OTUD7BQ6GQQ9 843 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 CCDC174Q6PII3 467 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 CPXCR1Q8N123 301 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 DDX11Q96FC9 970 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 PAGR1Q9BTK6 254 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 RAVER2Q9HCJ3 691 aaKnown RBP12.35□□□□□ -0.43
TRIM6-209ENST00000507320 FOXD4L1Q9NU39 408 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 ZNF214Q9UL59 606 aaPredicted RBP12.35□□□□□ -0.43
TRIM6-209ENST00000507320 ZBTB5O15062 677 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 PRPF3O43395 683 aaKnown RBP12.35□□□□□ -0.43
TRIM6-209ENST00000507320 FMNL1O95466 1100 aaPredicted RBP12.35□□□□□ -0.43
TRIM6-209ENST00000507320 SLC4A3P48751 1232 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 Q3C1V9 767 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 CPLX2Q6PUV4 134 aaKnown RBP12.35□□□□□ -0.43
TRIM6-209ENST00000507320 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
TRIM6-209ENST00000507320 ANKRD13CQ8N6S4 541 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 SMARCC2Q8TAQ2 1214 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 RRP36Q96EU6 259 aaKnown RBP12.35□□□□□ -0.43
TRIM6-209ENST00000507320 AGBL1Q96MI9 1066 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 AIFM3Q96NN9 605 aa12.35□□□□□ -0.43
TRIM6-209ENST00000507320 RNF26Q9BY78 433 aaPredicted RBP12.35□□□□□ -0.43
TRIM6-209ENST00000507320 PNMA6FA0A0J9YX94 578 aa12.34□□□□□ -0.43
TRIM6-209ENST00000507320 CA12O43570 354 aa12.34□□□□□ -0.43
TRIM6-209ENST00000507320 TLR2O60603 784 aa12.34□□□□□ -0.43
TRIM6-209ENST00000507320 ZBED4O75132 1171 aa12.34□□□□□ -0.43
TRIM6-209ENST00000507320 TRPA1O75762 1119 aa12.34□□□□□ -0.43
TRIM6-209ENST00000507320 CDKL5O76039 1030 aa12.34□□□□□ -0.43
TRIM6-209ENST00000507320 SSRP1Q08945 709 aaKnown RBP12.34□□□□□ -0.43
TRIM6-209ENST00000507320 SPRYD3Q8NCJ5 442 aa12.34□□□□□ -0.43
TRIM6-209ENST00000507320 GPKOWQ92917 476 aaPredicted RBP eCLIP12.34□□□□□ -0.43
TRIM6-209ENST00000507320 SHISA4Q96DD7 197 aa12.34□□□□□ -0.43
TRIM6-209ENST00000507320 LLPHQ9BRT6 129 aaKnown RBP12.34□□□□□ -0.43
TRIM6-209ENST00000507320 RNF186Q9NXI6 227 aa12.34□□□□□ -0.43
TRIM6-209ENST00000507320 ORC3Q9UBD5 711 aaPredicted RBP12.34□□□□□ -0.43
TRIM6-209ENST00000507320 CPA4Q9UI42 421 aa12.34□□□□□ -0.43
TRIM6-209ENST00000507320 RIPK3Q9Y572 518 aa12.34□□□□□ -0.43
TRIM6-209ENST00000507320 TBC1D8O95759 1140 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 ALDH1A1P00352 501 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 ICAM1P05362 532 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 ANP32AP39687 249 aaKnown RBP12.33□□□□□ -0.44
TRIM6-209ENST00000507320 PLS1Q14651 629 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 USH1GQ495M9 461 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 TYW1BQ6NUM6 668 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 TRIM22Q8IYM9 498 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 MB21D1Q8N884 522 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 COA7Q96BR5 231 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 ZFYVE28Q9HCC9 887 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 GJB4Q9NTQ9 266 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 RABGAP1Q9Y3P9 1069 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 STK36Q9NRP7 1315 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 ATP2A1O14983 1001 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 FDX1P10109 184 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 BCRP11274 1271 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 GCLCP48506 637 aaPredicted RBP12.33□□□□□ -0.44
TRIM6-209ENST00000507320 ERVK-9P63128 1117 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 ERVK-24P63145 666 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 PFKFB3Q16875 520 aaPredicted RBP12.33□□□□□ -0.44
TRIM6-209ENST00000507320 WWC2Q6AWC2 1192 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 SNRNP48Q6IEG0 339 aaKnown RBP12.33□□□□□ -0.44
TRIM6-209ENST00000507320 C17orf99Q6UX52 265 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 SPATC1LQ9H0A9 340 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 SEC63Q9UGP8 760 aaKnown RBP12.33□□□□□ -0.44
TRIM6-209ENST00000507320 CCPG1Q9ULG6 757 aa12.33□□□□□ -0.44
TRIM6-209ENST00000507320 DOCK3Q8IZD9 2030 aa12.32□□□□□ -0.44
TRIM6-209ENST00000507320 DEXIO95424 95 aa12.32□□□□□ -0.44
TRIM6-209ENST00000507320 SCG2P13521 617 aa12.32□□□□□ -0.44
TRIM6-209ENST00000507320 PDIA4P13667 645 aaKnown RBP12.32□□□□□ -0.44
TRIM6-209ENST00000507320 GJB2P29033 226 aa12.32□□□□□ -0.44
TRIM6-209ENST00000507320 STAT3P40763 770 aa12.32□□□□□ -0.44
TRIM6-209ENST00000507320 AKAP17AQ02040 695 aaKnown RBP12.32□□□□□ -0.44
TRIM6-209ENST00000507320 BECN1Q14457 450 aa12.32□□□□□ -0.44
TRIM6-209ENST00000507320 HEATR3Q7Z4Q2 680 aa12.32□□□□□ -0.44
TRIM6-209ENST00000507320 FBXO11Q86XK2 927 aa12.32□□□□□ -0.44
TRIM6-209ENST00000507320 INTS4Q96HW7 963 aaKnown RBP12.32□□□□□ -0.44
TRIM6-209ENST00000507320 AMNQ9BXJ7 453 aa12.32□□□□□ -0.44
TRIM6-209ENST00000507320 MOV10L1Q9BXT6 1211 aaKnown RBP12.32□□□□□ -0.44
TRIM6-209ENST00000507320 TEX13BQ9BXU2 312 aa12.32□□□□□ -0.44
TRIM6-209ENST00000507320 PORCNQ9H237 461 aa12.32□□□□□ -0.44
TRIM6-209ENST00000507320 HOMER2Q9NSB8 354 aa12.32□□□□□ -0.44
TRIM6-209ENST00000507320 MORF4L1Q9UBU8 362 aa12.32□□□□□ -0.44
TRIM6-209ENST00000507320 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.32□□□□□ -0.44
TRIM6-209ENST00000507320 CTDP1Q9Y5B0 961 aaPredicted RBP12.32□□□□□ -0.44
TRIM6-209ENST00000507320 PCDHA1Q9Y5I3 950 aa12.32□□□□□ -0.44
TRIM6-209ENST00000507320 ECM2O94769 699 aaPredicted RBP12.31□□□□□ -0.44
TRIM6-209ENST00000507320 ALAS1P13196 640 aa12.31□□□□□ -0.44
TRIM6-209ENST00000507320 OAZ1P54368 228 aa12.31□□□□□ -0.44
TRIM6-209ENST00000507320 FAM110CQ1W6H9 321 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms