RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 MYPNQ86TC9 1320 aa16.42■□□□□ 0.22
RNF4-208ENST00000507247 ZBTB5O15062 677 aa16.41■□□□□ 0.22
RNF4-208ENST00000507247 TAL1P17542 331 aaPredicted RBP16.41■□□□□ 0.22
RNF4-208ENST00000507247 AKAP17AQ02040 695 aaKnown RBP16.41■□□□□ 0.22
RNF4-208ENST00000507247 KIF23Q02241 960 aaPredicted RBP16.41■□□□□ 0.22
RNF4-208ENST00000507247 PABPC4Q13310 644 aaKnown RBP eCLIP16.41■□□□□ 0.22
RNF4-208ENST00000507247 PFKFB3Q16875 520 aaPredicted RBP16.41■□□□□ 0.22
RNF4-208ENST00000507247 REPS2Q8NFH8 660 aa16.41■□□□□ 0.22
RNF4-208ENST00000507247 GPKOWQ92917 476 aaPredicted RBP eCLIP16.41■□□□□ 0.22
RNF4-208ENST00000507247 SHISA4Q96DD7 197 aa16.41■□□□□ 0.22
RNF4-208ENST00000507247 RBM27Q9P2N5 1060 aaKnown RBP16.41■□□□□ 0.22
RNF4-208ENST00000507247 PNMA6FA0A0J9YX94 578 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 VWA5AO00534 786 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 CYP2C8P10632 490 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 SCG2P13521 617 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 OSBPP22059 807 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 FOSBP53539 338 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 HERVK_113P62684 666 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 NOGQ13253 232 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 WWC2Q6AWC2 1192 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 CCDC174Q6PII3 467 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 IFNL1Q8IU54 200 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 ALG1Q9BT22 464 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 SLC38A10Q9HBR0 1119 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 GJB4Q9NTQ9 266 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 DAXXQ9UER7 740 aaPredicted RBP16.4■□□□□ 0.22
RNF4-208ENST00000507247 SEC63Q9UGP8 760 aaKnown RBP16.4■□□□□ 0.22
RNF4-208ENST00000507247 ZNF536O15090 1300 aa16.4■□□□□ 0.22
RNF4-208ENST00000507247 WDR33Q9C0J8 1336 aaKnown RBP16.4■□□□□ 0.22
RNF4-208ENST00000507247 PEX10O60683 326 aa16.39■□□□□ 0.21
RNF4-208ENST00000507247 TM4SF4P48230 202 aa16.39■□□□□ 0.21
RNF4-208ENST00000507247 SREBF2Q12772 1141 aa16.39■□□□□ 0.21
RNF4-208ENST00000507247 TYW1BQ6NUM6 668 aa16.39■□□□□ 0.21
RNF4-208ENST00000507247 LBX2Q6XYB7 198 aa16.39■□□□□ 0.21
RNF4-208ENST00000507247 FAM184AQ8NB25 1140 aa16.39■□□□□ 0.21
RNF4-208ENST00000507247 COA7Q96BR5 231 aa16.39■□□□□ 0.21
RNF4-208ENST00000507247 HOXC10Q9NYD6 342 aa16.39■□□□□ 0.21
RNF4-208ENST00000507247 PNMA3Q9UL41 463 aa16.39■□□□□ 0.21
RNF4-208ENST00000507247 RBBP6Q7Z6E9 1792 aaKnown RBP16.38■□□□□ 0.21
RNF4-208ENST00000507247 STXBP3O00186 592 aa16.38■□□□□ 0.21
RNF4-208ENST00000507247 FOXN1O15353 648 aa16.38■□□□□ 0.21
RNF4-208ENST00000507247 ZBED4O75132 1171 aa16.38■□□□□ 0.21
RNF4-208ENST00000507247 CNMDO75829 334 aa16.38■□□□□ 0.21
RNF4-208ENST00000507247 FDX1P10109 184 aa16.38■□□□□ 0.21
RNF4-208ENST00000507247 INHBEP58166 350 aa16.38■□□□□ 0.21
RNF4-208ENST00000507247 OTUD7BQ6GQQ9 843 aa16.38■□□□□ 0.21
RNF4-208ENST00000507247 HEATR3Q7Z4Q2 680 aa16.38■□□□□ 0.21
RNF4-208ENST00000507247 WASF1Q92558 559 aa16.38■□□□□ 0.21
RNF4-208ENST00000507247 RAVER2Q9HCJ3 691 aaKnown RBP16.38■□□□□ 0.21
RNF4-208ENST00000507247 VPS54Q9P1Q0 977 aa16.38■□□□□ 0.21
RNF4-208ENST00000507247 BTBD7Q9P203 1132 aa16.38■□□□□ 0.21
RNF4-208ENST00000507247 ICAM1P05362 532 aa16.37■□□□□ 0.21
RNF4-208ENST00000507247 DDIT3P35638 169 aa16.37■□□□□ 0.21
RNF4-208ENST00000507247 TMEM132BQ14DG7 1078 aa16.37■□□□□ 0.21
RNF4-208ENST00000507247 USH1GQ495M9 461 aa16.37■□□□□ 0.21
RNF4-208ENST00000507247 FBXO11Q86XK2 927 aa16.37■□□□□ 0.21
RNF4-208ENST00000507247 CPXCR1Q8N123 301 aa16.37■□□□□ 0.21
RNF4-208ENST00000507247 AGBL1Q96MI9 1066 aa16.37■□□□□ 0.21
RNF4-208ENST00000507247 AMNQ9BXJ7 453 aa16.37■□□□□ 0.21
RNF4-208ENST00000507247 CWC22Q9HCG8 908 aaKnown RBP16.37■□□□□ 0.21
RNF4-208ENST00000507247 TXNRD2Q9NNW7 524 aa16.37■□□□□ 0.21
RNF4-208ENST00000507247 ZCCHC17Q9NP64 241 aaKnown RBP16.37■□□□□ 0.21
RNF4-208ENST00000507247 BARHL2Q9NY43 387 aa16.37■□□□□ 0.21
RNF4-208ENST00000507247 ZNF214Q9UL59 606 aaPredicted RBP16.37■□□□□ 0.21
RNF4-208ENST00000507247 ADGRA2Q96PE1 1338 aa16.37■□□□□ 0.21
RNF4-208ENST00000507247 GUCY1B3Q02153 619 aa16.36■□□□□ 0.21
RNF4-208ENST00000507247 LARP1BQ659C4 914 aaKnown RBP16.36■□□□□ 0.21
RNF4-208ENST00000507247 MB21D1Q8N884 522 aa16.36■□□□□ 0.21
RNF4-208ENST00000507247 C8orf76Q96K31 380 aa16.36■□□□□ 0.21
RNF4-208ENST00000507247 PARK7Q99497 189 aaKnown RBP16.36■□□□□ 0.21
RNF4-208ENST00000507247 PAGR1Q9BTK6 254 aa16.36■□□□□ 0.21
RNF4-208ENST00000507247 RBPJLQ9UBG7 517 aa16.36■□□□□ 0.21
RNF4-208ENST00000507247 CCPG1Q9ULG6 757 aa16.36■□□□□ 0.21
RNF4-208ENST00000507247 KIF3AQ9Y496 699 aa16.36■□□□□ 0.21
RNF4-208ENST00000507247 CTDP1Q9Y5B0 961 aaPredicted RBP16.36■□□□□ 0.21
RNF4-208ENST00000507247 PCDHA1Q9Y5I3 950 aa16.36■□□□□ 0.21
RNF4-208ENST00000507247 hCG_1984214I3L0E3 225 aa16.35■□□□□ 0.21
RNF4-208ENST00000507247 ATP2A1O14983 1001 aa16.35■□□□□ 0.21
RNF4-208ENST00000507247 SYT1P21579 422 aa16.35■□□□□ 0.21
RNF4-208ENST00000507247 OAZ1P54368 228 aa16.35■□□□□ 0.21
RNF4-208ENST00000507247 NAPAP54920 295 aa16.35■□□□□ 0.21
RNF4-208ENST00000507247 TAF1CQ15572 869 aaPredicted RBP16.35■□□□□ 0.21
RNF4-208ENST00000507247 KRT40Q6A162 431 aa16.35■□□□□ 0.21
RNF4-208ENST00000507247 ZNF713Q8N859 430 aaPredicted RBP16.35■□□□□ 0.21
RNF4-208ENST00000507247 SMCR8Q8TEV9 937 aaPredicted RBP16.35■□□□□ 0.21
RNF4-208ENST00000507247 SH3GLB2Q9NR46 395 aa16.35■□□□□ 0.21
RNF4-208ENST00000507247 KCNJ14Q9UNX9 436 aa16.35■□□□□ 0.21
RNF4-208ENST00000507247 RIPK3Q9Y572 518 aa16.35■□□□□ 0.21
RNF4-208ENST00000507247 OPLAHO14841 1288 aa16.34■□□□□ 0.21
RNF4-208ENST00000507247 ADAMTS3O15072 1205 aa16.34■□□□□ 0.21
RNF4-208ENST00000507247 PKP1Q13835 747 aa16.34■□□□□ 0.21
RNF4-208ENST00000507247 PLS1Q14651 629 aa16.34■□□□□ 0.21
RNF4-208ENST00000507247 NPY5RQ15761 445 aa16.34■□□□□ 0.21
RNF4-208ENST00000507247 SNRNP48Q6IEG0 339 aaKnown RBP16.34■□□□□ 0.21
RNF4-208ENST00000507247 TNS4Q8IZW8 715 aa16.34■□□□□ 0.21
RNF4-208ENST00000507247 FBXO18Q8NFZ0 1043 aa16.34■□□□□ 0.21
RNF4-208ENST00000507247 GTF3C2Q8WUA4 911 aaPredicted RBP16.34■□□□□ 0.21
RNF4-208ENST00000507247 PHF20Q9BVI0 1012 aa16.34■□□□□ 0.21
RNF4-208ENST00000507247 WBP1LQ9NX94 342 aa16.34■□□□□ 0.21
RNF4-208ENST00000507247 RABGAP1Q9Y3P9 1069 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms