RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 FAAP100Q0VG06 881 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 KCNA10Q16322 511 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 FAM83BQ5T0W9 1011 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 ABRAQ8N0Z2 381 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 NUP133Q8WUM0 1156 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 CHMP4CQ96CF2 233 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 DDX11Q96FC9 970 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 NUP88Q99567 741 aaPredicted RBP6.95□□□□□ -1.3
GYPB-208ENST00000507009 VCPKMTQ9H867 229 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 ISY1Q9ULR0 285 aaKnown RBP6.95□□□□□ -1.3
GYPB-208ENST00000507009 CTDP1Q9Y5B0 961 aaPredicted RBP6.95□□□□□ -1.3
GYPB-208ENST00000507009 SYNRGQ9UMZ2 1314 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 VCANP13611 3396 aa6.95□□□□□ -1.3
GYPB-208ENST00000507009 SPTBN5Q9NRC6 3674 aaKnown RBP6.94□□□□□ -1.3
GYPB-208ENST00000507009 WDR46O15213 610 aaKnown RBP6.94□□□□□ -1.3
GYPB-208ENST00000507009 MBD4O95243 580 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 TIMP1P01033 207 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 C6orf222P0C671 652 aaPredicted RBP6.94□□□□□ -1.3
GYPB-208ENST00000507009 EEF2P13639 858 aaKnown RBP6.94□□□□□ -1.3
GYPB-208ENST00000507009 CSF2RAP15509 400 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 STAT3P40763 770 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 PPIGQ13427 754 aaKnown RBP eCLIP6.94□□□□□ -1.3
GYPB-208ENST00000507009 TTF1Q15361 905 aaPredicted RBP6.94□□□□□ -1.3
GYPB-208ENST00000507009 ZNF792Q3KQV3 632 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 C1orf53Q5VUE5 145 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 SNRNP48Q6IEG0 339 aaKnown RBP6.94□□□□□ -1.3
GYPB-208ENST00000507009 NOL8Q76FK4 1167 aaKnown RBP6.94□□□□□ -1.3
GYPB-208ENST00000507009 SIAH1Q8IUQ4 282 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 AMOTL1Q8IY63 956 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 CPXCR1Q8N123 301 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 ADAMTS19Q8TE59 1207 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 ZDHHC16Q969W1 377 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 GLT1D1Q96MS3 346 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 NKX2-4Q9H2Z4 354 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 DCP1AQ9NPI6 582 aaPredicted RBP6.94□□□□□ -1.3
GYPB-208ENST00000507009 THEGQ9P2T0 379 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 SWAP70Q9UH65 585 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 FAM184BQ9ULE4 1060 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 NOP58Q9Y2X3 529 aaKnown RBP6.94□□□□□ -1.3
GYPB-208ENST00000507009 TMX2Q9Y320 296 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 GBF1Q92538 1859 aa6.94□□□□□ -1.3
GYPB-208ENST00000507009 USP17L12C9JPN9 530 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 USP17L21D6R901 530 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 VWA5AO00534 786 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 TLR3O15455 904 aaKnown RBP6.93□□□□□ -1.3
GYPB-208ENST00000507009 IGSF3O75054 1194 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 ADAMTS4O75173 837 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 CHGBP05060 677 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 ASGR1P07306 291 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 IFIT2P09913 472 aaKnown RBP6.93□□□□□ -1.3
GYPB-208ENST00000507009 ZNF865P0CJ78 1059 aaPredicted RBP6.93□□□□□ -1.3
GYPB-208ENST00000507009 CYP2C18P33260 490 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 CDK8P49336 464 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 SKIV2LQ15477 1246 aaKnown RBP6.93□□□□□ -1.3
GYPB-208ENST00000507009 TMEM240Q5SV17 173 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 MFSD5Q6N075 450 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 CEP85Q6P2H3 762 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 CCDC174Q6PII3 467 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 ZNF365Q70YC5 407 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 ERC1Q8IUD2 1116 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 RIOX2Q8IUF8 465 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 TMEM199Q8N511 208 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 KIFC2Q96AC6 838 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 DDRGK1Q96HY6 314 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 NECAB3Q96P71 396 aaPredicted RBP6.93□□□□□ -1.3
GYPB-208ENST00000507009 ASB2Q96Q27 587 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 UHRF1Q96T88 793 aaPredicted RBP6.93□□□□□ -1.3
GYPB-208ENST00000507009 SLC4A5Q9BY07 1137 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 PBX4Q9BYU1 374 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 ADAM33Q9BZ11 813 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 BOLA2Q9H3K6 86 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 SPC25Q9HBM1 224 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 GOPCQ9HD26 462 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 MSRAQ9UJ68 235 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 PPP1R9AQ9ULJ8 1098 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 MCM3APO60318 1980 aa6.93□□□□□ -1.3
GYPB-208ENST00000507009 TCF20Q9UGU0 1960 aaKnown RBP6.92□□□□□ -1.3
GYPB-208ENST00000507009 TCRBV5S4A2TA0A5A2 114 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 MOXD2PA6NHM9 499 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 ZBBXA8MT70 800 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 RLBP1P12271 317 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 RABGGTBP53611 331 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 CCL23P55773 120 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 MRPS5P82675 430 aaKnown RBP6.92□□□□□ -1.3
GYPB-208ENST00000507009 BEX3Q00994 111 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 ACVR2BQ13705 512 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 ADGRE1Q14246 886 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 GNASQ5JWF2 1037 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 C16orf59Q7L2K0 433 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 OTOP2Q7RTS6 562 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 ANKRD33Q7Z3H0 272 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 ANKRD35Q8N283 1001 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 CLASRPQ8N2M8 674 aaKnown RBP6.92□□□□□ -1.3
GYPB-208ENST00000507009 RHPN1Q8TCX5 695 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 CCDC17Q96LX7 622 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 SLF1Q9BQI6 1058 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 TSEN34Q9BSV6 310 aaKnown RBP6.92□□□□□ -1.3
GYPB-208ENST00000507009 ZBED2Q9BTP6 218 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 SLC28A3Q9HAS3 691 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 RAVER2Q9HCJ3 691 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms