RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.29■□□□□ 0.36
SEC24D-208ENST00000506622 CHURC1Q8WUH1 139 aa17.29■□□□□ 0.36
SEC24D-208ENST00000506622 GUCD1Q96NT3 240 aa17.29■□□□□ 0.36
SEC24D-208ENST00000506622 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.29■□□□□ 0.36
SEC24D-208ENST00000506622 PLIN4Q96Q06 1357 aa17.28■□□□□ 0.36
SEC24D-208ENST00000506622 KIAA0355O15063 1070 aa17.28■□□□□ 0.36
SEC24D-208ENST00000506622 SLC1A4P43007 532 aa17.28■□□□□ 0.36
SEC24D-208ENST00000506622 FAM160B2Q86V87 743 aa17.28■□□□□ 0.36
SEC24D-208ENST00000506622 KLHDC9Q8NEP7 349 aa17.28■□□□□ 0.36
SEC24D-208ENST00000506622 OTUD7AQ8TE49 926 aaPredicted RBP17.28■□□□□ 0.36
SEC24D-208ENST00000506622 GLT1D1Q96MS3 346 aa17.28■□□□□ 0.36
SEC24D-208ENST00000506622 TOX2Q96NM4 488 aa17.28■□□□□ 0.36
SEC24D-208ENST00000506622 HOMER2Q9NSB8 354 aa17.28■□□□□ 0.36
SEC24D-208ENST00000506622 C6orf222P0C671 652 aaPredicted RBP17.27■□□□□ 0.36
SEC24D-208ENST00000506622 MCCP23508 829 aa17.27■□□□□ 0.36
SEC24D-208ENST00000506622 ITGB8P26012 769 aa17.27■□□□□ 0.36
SEC24D-208ENST00000506622 SMAD3P84022 425 aaKnown RBP17.27■□□□□ 0.36
SEC24D-208ENST00000506622 CCDC144BQ3MJ40 725 aa17.27■□□□□ 0.36
SEC24D-208ENST00000506622 ANKRD33Q7Z3H0 272 aa17.27■□□□□ 0.36
SEC24D-208ENST00000506622 PCSK9Q8NBP7 692 aaKnown RBP17.27■□□□□ 0.36
SEC24D-208ENST00000506622 STAG1Q8WVM7 1258 aa17.27■□□□□ 0.36
SEC24D-208ENST00000506622 VTI1AQ96AJ9 217 aa17.27■□□□□ 0.36
SEC24D-208ENST00000506622 GMCL1Q96IK5 515 aa17.27■□□□□ 0.36
SEC24D-208ENST00000506622 ACAD9Q9H845 621 aa17.27■□□□□ 0.36
SEC24D-208ENST00000506622 STX8Q9UNK0 236 aa17.27■□□□□ 0.36
SEC24D-208ENST00000506622 TSPY2A6NKD2 308 aa17.26■□□□□ 0.35
SEC24D-208ENST00000506622 FPGSQ05932 587 aa17.26■□□□□ 0.35
SEC24D-208ENST00000506622 FAAP100Q0VG06 881 aa17.26■□□□□ 0.35
SEC24D-208ENST00000506622 ARMCX2Q7L311 632 aa17.26■□□□□ 0.35
SEC24D-208ENST00000506622 CCDC144CPQ8IYA2 1237 aa17.26■□□□□ 0.35
SEC24D-208ENST00000506622 CHMP4CQ96CF2 233 aa17.26■□□□□ 0.35
SEC24D-208ENST00000506622 RNPC3Q96LT9 517 aaKnown RBP17.26■□□□□ 0.35
SEC24D-208ENST00000506622 SEMA6BQ9H3T3 888 aa17.26■□□□□ 0.35
SEC24D-208ENST00000506622 ELP1O95163 1332 aa17.26■□□□□ 0.35
SEC24D-208ENST00000506622 MYO9BQ13459 2157 aa17.26■□□□□ 0.35
SEC24D-208ENST00000506622 CST5P28325 142 aaPredicted RBP17.25■□□□□ 0.35
SEC24D-208ENST00000506622 GNASQ5JWF2 1037 aa17.25■□□□□ 0.35
SEC24D-208ENST00000506622 ANKRD45Q5TZF3 282 aa17.25■□□□□ 0.35
SEC24D-208ENST00000506622 CCSAPQ6IQ19 270 aaPredicted RBP17.25■□□□□ 0.35
SEC24D-208ENST00000506622 FGD4Q96M96 766 aa17.25■□□□□ 0.35
SEC24D-208ENST00000506622 AGBL1Q96MI9 1066 aa17.25■□□□□ 0.35
SEC24D-208ENST00000506622 RNF146Q9NTX7 359 aa17.25■□□□□ 0.35
SEC24D-208ENST00000506622 MROH7Q68CQ1 1323 aa17.25■□□□□ 0.35
SEC24D-208ENST00000506622 MYADML2A6NDP7 307 aa17.24■□□□□ 0.35
SEC24D-208ENST00000506622 RANBP6O60518 1105 aaKnown RBP17.24■□□□□ 0.35
SEC24D-208ENST00000506622 PLA2G6O60733 806 aa17.24■□□□□ 0.35
SEC24D-208ENST00000506622 ASGR1P07306 291 aa17.24■□□□□ 0.35
SEC24D-208ENST00000506622 GJA9P57773 515 aa17.24■□□□□ 0.35
SEC24D-208ENST00000506622 CNTN2Q02246 1040 aa17.24■□□□□ 0.35
SEC24D-208ENST00000506622 CTDSPL2Q05D32 466 aa17.24■□□□□ 0.35
SEC24D-208ENST00000506622 TKFCQ3LXA3 575 aa17.24■□□□□ 0.35
SEC24D-208ENST00000506622 RCSD1Q6JBY9 416 aa17.24■□□□□ 0.35
SEC24D-208ENST00000506622 CCDC129Q6ZRS4 1044 aa17.24■□□□□ 0.35
SEC24D-208ENST00000506622 KCTD1Q719H9 257 aa17.24■□□□□ 0.35
SEC24D-208ENST00000506622 TRERF1Q96PN7 1200 aa17.24■□□□□ 0.35
SEC24D-208ENST00000506622 CDX2Q99626 313 aaPredicted RBP17.24■□□□□ 0.35
SEC24D-208ENST00000506622 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.24■□□□□ 0.35
SEC24D-208ENST00000506622 ASB14A6NK59 587 aa17.23■□□□□ 0.35
SEC24D-208ENST00000506622 TIMP1P01033 207 aa17.23■□□□□ 0.35
SEC24D-208ENST00000506622 ALAS1P13196 640 aa17.23■□□□□ 0.35
SEC24D-208ENST00000506622 EPHB4P54760 987 aa17.23■□□□□ 0.35
SEC24D-208ENST00000506622 NOL8Q76FK4 1167 aaKnown RBP17.23■□□□□ 0.35
SEC24D-208ENST00000506622 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.23■□□□□ 0.35
SEC24D-208ENST00000506622 FAM133AQ8N9E0 248 aa17.23■□□□□ 0.35
SEC24D-208ENST00000506622 EVI5LQ96CN4 794 aa17.23■□□□□ 0.35
SEC24D-208ENST00000506622 UPF3AQ9H1J1 476 aaKnown RBP17.23■□□□□ 0.35
SEC24D-208ENST00000506622 A1CFQ9NQ94 594 aaKnown RBP17.23■□□□□ 0.35
SEC24D-208ENST00000506622 INCENPQ9NQS7 918 aa17.23■□□□□ 0.35
SEC24D-208ENST00000506622 ZNF536O15090 1300 aa17.23■□□□□ 0.35
SEC24D-208ENST00000506622 A0A0U1RQG5 324 aaPredicted RBP17.22■□□□□ 0.35
SEC24D-208ENST00000506622 ADCY6O43306 1168 aa17.22■□□□□ 0.35
SEC24D-208ENST00000506622 NMT2O60551 498 aa17.22■□□□□ 0.35
SEC24D-208ENST00000506622 IRX5P78411 483 aaPredicted RBP17.22■□□□□ 0.35
SEC24D-208ENST00000506622 TNFAIP2Q03169 654 aa17.22■□□□□ 0.35
SEC24D-208ENST00000506622 CCDC174Q6PII3 467 aa17.22■□□□□ 0.35
SEC24D-208ENST00000506622 IL17RBQ9NRM6 502 aa17.22■□□□□ 0.35
SEC24D-208ENST00000506622 ANAPC4Q9UJX5 808 aa17.22■□□□□ 0.35
SEC24D-208ENST00000506622 MTMR7Q9Y216 660 aa17.22■□□□□ 0.35
SEC24D-208ENST00000506622 ARVCFO00192 962 aa17.21■□□□□ 0.35
SEC24D-208ENST00000506622 FOXP2O15409 715 aa17.21■□□□□ 0.35
SEC24D-208ENST00000506622 CDK7P50613 346 aa17.21■□□□□ 0.35
SEC24D-208ENST00000506622 VPS53Q5VIR6 699 aa17.21■□□□□ 0.35
SEC24D-208ENST00000506622 KATNBL1Q9H079 304 aa17.21■□□□□ 0.35
SEC24D-208ENST00000506622 HELLSQ9NRZ9 838 aa17.21■□□□□ 0.35
SEC24D-208ENST00000506622 TOMM22Q9NS69 142 aa17.21■□□□□ 0.35
SEC24D-208ENST00000506622 TBX21Q9UL17 535 aa17.21■□□□□ 0.35
SEC24D-208ENST00000506622 PRR12Q9ULL5 1215 aa17.21■□□□□ 0.35
SEC24D-208ENST00000506622 SALL3Q9BXA9 1300 aa17.21■□□□□ 0.35
SEC24D-208ENST00000506622 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.21■□□□□ 0.34
SEC24D-208ENST00000506622 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.21■□□□□ 0.34
SEC24D-208ENST00000506622 SOWAHBA6NEL2 793 aa17.21■□□□□ 0.34
SEC24D-208ENST00000506622 TLR3O15455 904 aaKnown RBP17.21■□□□□ 0.34
SEC24D-208ENST00000506622 ORC4O43929 436 aa17.21■□□□□ 0.34
SEC24D-208ENST00000506622 RRP1P56182 461 aaKnown RBP17.21■□□□□ 0.34
SEC24D-208ENST00000506622 SNAP25P60880 206 aa17.21■□□□□ 0.34
SEC24D-208ENST00000506622 MFSD5Q6N075 450 aa17.21■□□□□ 0.34
SEC24D-208ENST00000506622 AP5M1Q9H0R1 490 aa17.21■□□□□ 0.34
SEC24D-208ENST00000506622 TTYH1Q9H313 450 aaPredicted RBP17.21■□□□□ 0.34
SEC24D-208ENST00000506622 CCPG1Q9ULG6 757 aa17.21■□□□□ 0.34
SEC24D-208ENST00000506622 TMEM265A0A087WTH1 108 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms