RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 TRERF1Q96PN7 1200 aa18.28■□□□□ 0.52
DDR1-258ENST00000506573 TMEM47Q9BQJ4 181 aa18.28■□□□□ 0.52
DDR1-258ENST00000506573 CNNM2Q9H8M5 875 aa18.28■□□□□ 0.52
DDR1-258ENST00000506573 SPC25Q9HBM1 224 aa18.28■□□□□ 0.52
DDR1-258ENST00000506573 RNF146Q9NTX7 359 aa18.28■□□□□ 0.52
DDR1-258ENST00000506573 PCDH10Q9P2E7 1040 aa18.28■□□□□ 0.52
DDR1-258ENST00000506573 PRR12Q9ULL5 1215 aa18.28■□□□□ 0.52
DDR1-258ENST00000506573 DNAJC25-GNG10A0A024R161 153 aa18.27■□□□□ 0.52
DDR1-258ENST00000506573 ALAS1P13196 640 aa18.27■□□□□ 0.52
DDR1-258ENST00000506573 LRRC26Q2I0M4 334 aa18.27■□□□□ 0.52
DDR1-258ENST00000506573 CCDC174Q6PII3 467 aa18.27■□□□□ 0.52
DDR1-258ENST00000506573 LBHD1Q9BQE6 289 aaPredicted RBP18.27■□□□□ 0.52
DDR1-258ENST00000506573 KRT23Q9C075 422 aa18.27■□□□□ 0.52
DDR1-258ENST00000506573 ABHD16BQ9H3Z7 469 aa18.27■□□□□ 0.52
DDR1-258ENST00000506573 ZHX1Q9UKY1 873 aaPredicted RBP18.27■□□□□ 0.52
DDR1-258ENST00000506573 CCPG1Q9ULG6 757 aa18.27■□□□□ 0.52
DDR1-258ENST00000506573 RAD50Q92878 1312 aa18.26■□□□□ 0.51
DDR1-258ENST00000506573 ASB14A6NK59 587 aa18.26■□□□□ 0.51
DDR1-258ENST00000506573 BMP8BP34820 402 aa18.26■□□□□ 0.51
DDR1-258ENST00000506573 FXR1P51114 621 aaKnown RBP eCLIP18.26■□□□□ 0.51
DDR1-258ENST00000506573 ATN1P54259 1190 aaPredicted RBP18.26■□□□□ 0.51
DDR1-258ENST00000506573 IRX6P78412 446 aaPredicted RBP18.26■□□□□ 0.51
DDR1-258ENST00000506573 LRRC41Q15345 812 aa18.26■□□□□ 0.51
DDR1-258ENST00000506573 TTC22Q5TAA0 569 aa18.26■□□□□ 0.51
DDR1-258ENST00000506573 SYDE2Q5VT97 1194 aa18.26■□□□□ 0.51
DDR1-258ENST00000506573 DGKHQ86XP1 1220 aa18.26■□□□□ 0.51
DDR1-258ENST00000506573 AGBL1Q96MI9 1066 aa18.26■□□□□ 0.51
DDR1-258ENST00000506573 ICAM1P05362 532 aa18.25■□□□□ 0.51
DDR1-258ENST00000506573 SYN1P17600 705 aa18.25■□□□□ 0.51
DDR1-258ENST00000506573 GPATCH4Q5T3I0 446 aaKnown RBP18.25■□□□□ 0.51
DDR1-258ENST00000506573 BTNL9Q6UXG8 535 aa18.25■□□□□ 0.51
DDR1-258ENST00000506573 TBC1D10CQ8IV04 446 aa18.25■□□□□ 0.51
DDR1-258ENST00000506573 KAT14Q9H8E8 782 aa18.25■□□□□ 0.51
DDR1-258ENST00000506573 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.25■□□□□ 0.51
DDR1-258ENST00000506573 TACC3Q9Y6A5 838 aa18.25■□□□□ 0.51
DDR1-258ENST00000506573 ZNF865P0CJ78 1059 aaPredicted RBP18.24■□□□□ 0.51
DDR1-258ENST00000506573 ADCYAP1R1P41586 468 aa18.24■□□□□ 0.51
DDR1-258ENST00000506573 TRDNQ13061 729 aa18.24■□□□□ 0.51
DDR1-258ENST00000506573 ACVR2BQ13705 512 aa18.24■□□□□ 0.51
DDR1-258ENST00000506573 SLC39A5Q6ZMH5 540 aa18.24■□□□□ 0.51
DDR1-258ENST00000506573 NUP133Q8WUM0 1156 aa18.24■□□□□ 0.51
DDR1-258ENST00000506573 MPHOSPH6Q99547 160 aaKnown RBP18.24■□□□□ 0.51
DDR1-258ENST00000506573 GDF15Q99988 308 aa18.24■□□□□ 0.51
DDR1-258ENST00000506573 UBAC1Q9BSL1 405 aa18.24■□□□□ 0.51
DDR1-258ENST00000506573 TSEN34Q9BSV6 310 aaKnown RBP18.24■□□□□ 0.51
DDR1-258ENST00000506573 UBE2OQ9C0C9 1292 aaKnown RBP18.24■□□□□ 0.51
DDR1-258ENST00000506573 RANBP17Q9H2T7 1088 aaKnown RBP18.24■□□□□ 0.51
DDR1-258ENST00000506573 PRO3102Q9H379 93 aa18.24■□□□□ 0.51
DDR1-258ENST00000506573 GPCPD1Q9NPB8 672 aa18.24■□□□□ 0.51
DDR1-258ENST00000506573 ATP11BQ9Y2G3 1177 aa18.24■□□□□ 0.51
DDR1-258ENST00000506573 DNAH12Q6ZR08 3092 aa18.24■□□□□ 0.51
DDR1-258ENST00000506573 RANBP2P49792 3224 aaKnown RBP18.23■□□□□ 0.51
DDR1-258ENST00000506573 KDM4AO75164 1064 aa18.23■□□□□ 0.51
DDR1-258ENST00000506573 DUSP11O75319 330 aaKnown RBP18.23■□□□□ 0.51
DDR1-258ENST00000506573 PDHBP11177 359 aa18.23■□□□□ 0.51
DDR1-258ENST00000506573 TAL1P17542 331 aaPredicted RBP18.23■□□□□ 0.51
DDR1-258ENST00000506573 MAGEA10P43363 369 aaPredicted RBP18.23■□□□□ 0.51
DDR1-258ENST00000506573 RTP1P59025 263 aa18.23■□□□□ 0.51
DDR1-258ENST00000506573 ARMCX2Q7L311 632 aa18.23■□□□□ 0.51
DDR1-258ENST00000506573 A1CFQ9NQ94 594 aaKnown RBP18.23■□□□□ 0.51
DDR1-258ENST00000506573 ADD3Q9UEY8 706 aaKnown RBP18.23■□□□□ 0.51
DDR1-258ENST00000506573 ZNFX1Q9P2E3 1918 aaKnown RBP18.23■□□□□ 0.51
DDR1-258ENST00000506573 ZNF536O15090 1300 aa18.23■□□□□ 0.51
DDR1-258ENST00000506573 NEDD4P46934 1319 aa18.23■□□□□ 0.51
DDR1-258ENST00000506573 FRMPD2Q68DX3 1309 aaPredicted RBP18.23■□□□□ 0.51
DDR1-258ENST00000506573 TRIOBPQ9H2D6 2365 aa18.22■□□□□ 0.51
DDR1-258ENST00000506573 SNAI1O95863 264 aaPredicted RBP18.22■□□□□ 0.51
DDR1-258ENST00000506573 PGK1P00558 417 aa18.22■□□□□ 0.51
DDR1-258ENST00000506573 SLC16A2P36021 539 aa18.22■□□□□ 0.51
DDR1-258ENST00000506573 ZNF543Q08ER8 600 aa18.22■□□□□ 0.51
DDR1-258ENST00000506573 NSMFQ6X4W1 530 aa18.22■□□□□ 0.51
DDR1-258ENST00000506573 CCDC144CPQ8IYA2 1237 aa18.22■□□□□ 0.51
DDR1-258ENST00000506573 PCSK9Q8NBP7 692 aaKnown RBP18.22■□□□□ 0.51
DDR1-258ENST00000506573 ZSCAN10Q96SZ4 725 aaPredicted RBP18.22■□□□□ 0.51
DDR1-258ENST00000506573 PHF24Q9UPV7 400 aa18.22■□□□□ 0.51
DDR1-258ENST00000506573 U3KPZ7 1027 aaPredicted RBP18.22■□□□□ 0.51
DDR1-258ENST00000506573 FRMPD3Q5JV73 1810 aa18.21■□□□□ 0.51
DDR1-258ENST00000506573 MOXD2PA6NHM9 499 aa18.21■□□□□ 0.51
DDR1-258ENST00000506573 B4DLN1 442 aa18.21■□□□□ 0.51
DDR1-258ENST00000506573 PDE4AP27815 886 aa18.21■□□□□ 0.51
DDR1-258ENST00000506573 MRPL12P52815 198 aaKnown RBP18.21■□□□□ 0.51
DDR1-258ENST00000506573 SNAP25P60880 206 aa18.21■□□□□ 0.51
DDR1-258ENST00000506573 C1orf53Q5VUE5 145 aa18.21■□□□□ 0.51
DDR1-258ENST00000506573 NOL8Q76FK4 1167 aaKnown RBP18.21■□□□□ 0.51
DDR1-258ENST00000506573 FAM133AQ8N9E0 248 aa18.21■□□□□ 0.51
DDR1-258ENST00000506573 PNMA1Q8ND90 353 aa18.21■□□□□ 0.51
DDR1-258ENST00000506573 FERMT2Q96AC1 680 aa18.21■□□□□ 0.51
DDR1-258ENST00000506573 ZKSCAN3Q9BRR0 538 aa18.21■□□□□ 0.51
DDR1-258ENST00000506573 CYP39A1Q9NYL5 469 aa18.21■□□□□ 0.51
DDR1-258ENST00000506573 PLXNA1Q9UIW2 1896 aa18.2■□□□□ 0.5
DDR1-258ENST00000506573 LOC102724159A0A0B4J2E5 919 aa18.2■□□□□ 0.5
DDR1-258ENST00000506573 B4E1Z4 1266 aa18.2■□□□□ 0.5
DDR1-258ENST00000506573 GSPT1P15170 499 aaKnown RBP18.2■□□□□ 0.5
DDR1-258ENST00000506573 CNTN2Q02246 1040 aa18.2■□□□□ 0.5
DDR1-258ENST00000506573 PWP2Q15269 919 aaKnown RBP18.2■□□□□ 0.5
DDR1-258ENST00000506573 CCDC144BQ3MJ40 725 aa18.2■□□□□ 0.5
DDR1-258ENST00000506573 TTBK2Q6IQ55 1244 aa18.2■□□□□ 0.5
DDR1-258ENST00000506573 TDHQ8IZJ6 230 aa18.2■□□□□ 0.5
DDR1-258ENST00000506573 ERICH2A1L162 156 aa18.19■□□□□ 0.5
DDR1-258ENST00000506573 PTPDC1A2A3K4 754 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms