RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 TBCKQ8TEA7 893 aa13.87□□□□□ -0.19
LIN54-206ENST00000506560 TMEM39BQ9GZU3 492 aa13.87□□□□□ -0.19
LIN54-206ENST00000506560 NAT10Q9H0A0 1025 aaKnown RBP13.87□□□□□ -0.19
LIN54-206ENST00000506560 CCNT1O60563 726 aaKnown RBP13.87□□□□□ -0.19
LIN54-206ENST00000506560 ECE1P42892 770 aa13.87□□□□□ -0.19
LIN54-206ENST00000506560 MIGA2Q7L4E1 593 aa13.87□□□□□ -0.19
LIN54-206ENST00000506560 CCDC84Q86UT8 332 aaPredicted RBP13.87□□□□□ -0.19
LIN54-206ENST00000506560 DPF2Q92785 391 aa13.87□□□□□ -0.19
LIN54-206ENST00000506560 GJA10Q969M2 543 aa13.87□□□□□ -0.19
LIN54-206ENST00000506560 TRIM34Q9BYJ4 488 aa13.87□□□□□ -0.19
LIN54-206ENST00000506560 ZNF70Q9UC06 446 aaPredicted RBP13.87□□□□□ -0.19
LIN54-206ENST00000506560 ZNF500O60304 480 aaPredicted RBP13.86□□□□□ -0.19
LIN54-206ENST00000506560 SLFN14P0C7P3 912 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 ABCB5Q2M3G0 1257 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 NBPF9Q3BBW0 867 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 SMARCE1Q969G3 411 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 CCDC17Q96LX7 622 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 C6orf50Q9HD87 102 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 IFNKQ9P0W0 207 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 CNTNAP1P78357 1384 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 BMP15O95972 392 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 SLC1A4P43007 532 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 R3HDM1Q15032 1099 aaKnown RBP13.86□□□□□ -0.19
LIN54-206ENST00000506560 DLGAP5Q15398 846 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 KIAA1755Q5JYT7 1200 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 SOGA3Q5TF21 947 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 SLFN13Q68D06 897 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 SH3RF1Q7Z6J0 888 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 REXO1Q8N1G1 1221 aaKnown RBP13.86□□□□□ -0.19
LIN54-206ENST00000506560 SLC16A10Q8TF71 515 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 BPIFA3Q9BQP9 254 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 XPO4Q9C0E2 1151 aaKnown RBP13.86□□□□□ -0.19
LIN54-206ENST00000506560 FANCLQ9NW38 375 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 PIM2Q9P1W9 311 aa13.86□□□□□ -0.19
LIN54-206ENST00000506560 MORC2Q9Y6X9 1032 aaPredicted RBP13.86□□□□□ -0.19
LIN54-206ENST00000506560 CD44P16070 742 aaKnown RBP13.85□□□□□ -0.19
LIN54-206ENST00000506560 SMARCA1P28370 1054 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 MORC3Q14149 939 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 NONOQ15233 471 aaKnown RBP eCLIP13.85□□□□□ -0.19
LIN54-206ENST00000506560 NT5DC1Q5TFE4 455 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 PDXDC2PQ6P474 469 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 FILIP1Q7Z7B0 1213 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 CACTINQ8WUQ7 758 aaKnown RBP13.85□□□□□ -0.19
LIN54-206ENST00000506560 KANSL2Q9H9L4 492 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 KIF13BQ9NQT8 1826 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 ATRNL1Q5VV63 1379 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 TDP2O95551 362 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 CUL4BQ13620 913 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 NAALADL2Q58DX5 795 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 SPATA20Q8TB22 786 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 ACER1Q8TDN7 264 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 ZNRF3Q9ULT6 936 aa13.85□□□□□ -0.19
LIN54-206ENST00000506560 PNMA6FA0A0J9YX94 578 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 F5H6K3 240 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 NFKBIEO00221 500 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 SLC37A4O43826 429 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 ENTPD3O75355 529 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 SMC2O95347 1197 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 GNA11P29992 359 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 PRELPP51888 382 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 KLRC3Q07444 240 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 DPYDQ12882 1025 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 QRICH1Q2TAL8 776 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 GALNT17Q6IS24 598 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 NIM1KQ8IY84 436 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.84□□□□□ -0.19
LIN54-206ENST00000506560 PSDA5PKW4 1024 aaPredicted RBP13.84□□□□□ -0.19
LIN54-206ENST00000506560 USP17L15C9J2P7 530 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 USP17L13C9JLJ4 530 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 USP17L11C9JVI0 530 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 USP17L18D6R9N7 530 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 USP17L22D6RA61 530 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 USP17L17D6RBQ6 530 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 USP17L19D6RCP7 530 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 USP17L20D6RJB6 530 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 NDUFB10O96000 172 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 USP17L24Q0WX57 530 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 RBM26Q5T8P6 1007 aaKnown RBP13.84□□□□□ -0.19
LIN54-206ENST00000506560 USP17L6PQ6QN14 398 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 KRT25Q7Z3Z0 450 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 NEK8Q86SG6 692 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 NYAP2Q9P242 653 aa13.84□□□□□ -0.19
LIN54-206ENST00000506560 ZBTB5O15062 677 aa13.83□□□□□ -0.19
LIN54-206ENST00000506560 NPM3O75607 178 aaKnown RBP13.83□□□□□ -0.19
LIN54-206ENST00000506560 TNNI2P48788 182 aa13.83□□□□□ -0.19
LIN54-206ENST00000506560 ADCY7P51828 1080 aa13.83□□□□□ -0.19
LIN54-206ENST00000506560 STX17P56962 302 aa13.83□□□□□ -0.19
LIN54-206ENST00000506560 ARL6IP4Q66PJ3 421 aaKnown RBP13.83□□□□□ -0.19
LIN54-206ENST00000506560 KLHL10Q6JEL2 608 aa13.83□□□□□ -0.19
LIN54-206ENST00000506560 DTHD1Q6ZMT9 781 aa13.83□□□□□ -0.19
LIN54-206ENST00000506560 TMEM179Q6ZVK1 233 aa13.83□□□□□ -0.19
LIN54-206ENST00000506560 OGFOD1Q8N543 542 aa13.83□□□□□ -0.19
LIN54-206ENST00000506560 CCDC12Q8WUD4 166 aaPredicted RBP13.83□□□□□ -0.19
LIN54-206ENST00000506560 UBE2Q2Q8WVN8 375 aa13.83□□□□□ -0.19
LIN54-206ENST00000506560 MKL1Q969V6 931 aa13.83□□□□□ -0.19
LIN54-206ENST00000506560 MRFAP1L1Q96HT8 127 aa13.83□□□□□ -0.19
LIN54-206ENST00000506560 P2RX7Q99572 595 aaKnown RBP13.83□□□□□ -0.19
LIN54-206ENST00000506560 ASTN2O75129 1339 aaPredicted RBP13.83□□□□□ -0.19
LIN54-206ENST00000506560 MYH7BA7E2Y1 1941 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms