RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 TDHQ8IZJ6 230 aa19.78■□□□□ 0.76
PDLIM7-215ENST00000506161 TINF2Q9BSI4 451 aa19.78■□□□□ 0.76
PDLIM7-215ENST00000506161 HOMER2Q9NSB8 354 aa19.78■□□□□ 0.76
PDLIM7-215ENST00000506161 PRR12Q9ULL5 1215 aa19.78■□□□□ 0.76
PDLIM7-215ENST00000506161 ISY1Q9ULR0 285 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-215ENST00000506161 ASTN1O14525 1302 aa19.77■□□□□ 0.76
PDLIM7-215ENST00000506161 FRMPD2Q68DX3 1309 aaPredicted RBP19.77■□□□□ 0.76
PDLIM7-215ENST00000506161 MYH6P13533 1939 aa19.77■□□□□ 0.76
PDLIM7-215ENST00000506161 ADCY6O43306 1168 aa19.77■□□□□ 0.76
PDLIM7-215ENST00000506161 CNTN2Q02246 1040 aa19.77■□□□□ 0.76
PDLIM7-215ENST00000506161 MUM1L1Q5H9M0 696 aa19.77■□□□□ 0.76
PDLIM7-215ENST00000506161 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.77■□□□□ 0.76
PDLIM7-215ENST00000506161 TCP11L1Q9NUJ3 509 aa19.77■□□□□ 0.76
PDLIM7-215ENST00000506161 CCDC174Q6PII3 467 aa19.76■□□□□ 0.75
PDLIM7-215ENST00000506161 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.76■□□□□ 0.75
PDLIM7-215ENST00000506161 SENP6Q9GZR1 1112 aaPredicted RBP19.76■□□□□ 0.75
PDLIM7-215ENST00000506161 GPCPD1Q9NPB8 672 aa19.76■□□□□ 0.75
PDLIM7-215ENST00000506161 DIS3Q9Y2L1 958 aaKnown RBP19.76■□□□□ 0.75
PDLIM7-215ENST00000506161 TAF6LQ9Y6J9 622 aa19.76■□□□□ 0.75
PDLIM7-215ENST00000506161 PLA2G6O60733 806 aa19.75■□□□□ 0.75
PDLIM7-215ENST00000506161 COPB2P35606 906 aa19.75■□□□□ 0.75
PDLIM7-215ENST00000506161 MAGEA10P43363 369 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-215ENST00000506161 ATN1P54259 1190 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-215ENST00000506161 CCDC96Q2M329 555 aa19.75■□□□□ 0.75
PDLIM7-215ENST00000506161 MFSD6Q6ZSS7 791 aa19.75■□□□□ 0.75
PDLIM7-215ENST00000506161 FAM160B2Q86V87 743 aa19.75■□□□□ 0.75
PDLIM7-215ENST00000506161 PURBQ96QR8 312 aaKnown RBP19.75■□□□□ 0.75
PDLIM7-215ENST00000506161 CPVLQ9H3G5 476 aa19.75■□□□□ 0.75
PDLIM7-215ENST00000506161 SLC5A4Q9NY91 659 aa19.75■□□□□ 0.75
PDLIM7-215ENST00000506161 B4E1Z4 1266 aa19.74■□□□□ 0.75
PDLIM7-215ENST00000506161 MSCO60682 206 aa19.74■□□□□ 0.75
PDLIM7-215ENST00000506161 PDHBP11177 359 aa19.74■□□□□ 0.75
PDLIM7-215ENST00000506161 TOP1P11387 765 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-215ENST00000506161 PTGS1P23219 599 aa19.74■□□□□ 0.75
PDLIM7-215ENST00000506161 OAZ1P54368 228 aa19.74■□□□□ 0.75
PDLIM7-215ENST00000506161 PTH1RQ03431 593 aa19.74■□□□□ 0.75
PDLIM7-215ENST00000506161 IKQ13123 557 aaPredicted RBP19.74■□□□□ 0.75
PDLIM7-215ENST00000506161 LRRC41Q15345 812 aa19.74■□□□□ 0.75
PDLIM7-215ENST00000506161 DSCC1Q9BVC3 393 aa19.74■□□□□ 0.75
PDLIM7-215ENST00000506161 A1CFQ9NQ94 594 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-215ENST00000506161 RNF146Q9NTX7 359 aa19.74■□□□□ 0.75
PDLIM7-215ENST00000506161 SOWAHBA6NEL2 793 aa19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 DNM1LO00429 736 aa19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 KDM4AO75164 1064 aa19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 PGK1P00558 417 aa19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 CHMLP26374 656 aa19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 MAMDC4Q6UXC1 1216 aa19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 BTNL9Q6UXG8 535 aa19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 CHST13Q8NET6 341 aa19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 CHURC1Q8WUH1 139 aa19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 DCAF4Q8WV16 495 aa19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 DDX11Q96FC9 970 aa19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 UBE2OQ9C0C9 1292 aaKnown RBP19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 KATNBL1Q9H079 304 aa19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 RANBP17Q9H2T7 1088 aaKnown RBP19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 DNAH12Q6ZR08 3092 aa19.73■□□□□ 0.75
PDLIM7-215ENST00000506161 UNC80Q8N2C7 3258 aa19.72■□□□□ 0.75
PDLIM7-215ENST00000506161 MYADML2A6NDP7 307 aa19.72■□□□□ 0.75
PDLIM7-215ENST00000506161 ZNF213O14771 459 aa19.72■□□□□ 0.75
PDLIM7-215ENST00000506161 MYCNP04198 464 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-215ENST00000506161 SNHG28P0DPA3 235 aa19.72■□□□□ 0.75
PDLIM7-215ENST00000506161 ALAS1P13196 640 aa19.72■□□□□ 0.75
PDLIM7-215ENST00000506161 FAM133AQ8N9E0 248 aa19.72■□□□□ 0.75
PDLIM7-215ENST00000506161 FERMT2Q96AC1 680 aa19.72■□□□□ 0.75
PDLIM7-215ENST00000506161 CTDP1Q9Y5B0 961 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-215ENST00000506161 ADAMTS4O75173 837 aa19.71■□□□□ 0.75
PDLIM7-215ENST00000506161 GOLGA8HP0CJ92 632 aa19.71■□□□□ 0.75
PDLIM7-215ENST00000506161 MFAP1P55081 439 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-215ENST00000506161 TMEM63BQ5T3F8 832 aa19.71■□□□□ 0.75
PDLIM7-215ENST00000506161 SYDE2Q5VT97 1194 aa19.71■□□□□ 0.75
PDLIM7-215ENST00000506161 ANKRD35Q8N283 1001 aa19.71■□□□□ 0.75
PDLIM7-215ENST00000506161 TRERF1Q96PN7 1200 aa19.71■□□□□ 0.75
PDLIM7-215ENST00000506161 ACAD9Q9H845 621 aa19.71■□□□□ 0.75
PDLIM7-215ENST00000506161 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-215ENST00000506161 SYNGAP1Q96PV0 1343 aa19.71■□□□□ 0.75
PDLIM7-215ENST00000506161 HIP1O00291 1037 aa19.7■□□□□ 0.74
PDLIM7-215ENST00000506161 ADCYAP1R1P41586 468 aa19.7■□□□□ 0.74
PDLIM7-215ENST00000506161 ZNF543Q08ER8 600 aa19.7■□□□□ 0.74
PDLIM7-215ENST00000506161 PPP4R3BQ5MIZ7 849 aa19.7■□□□□ 0.74
PDLIM7-215ENST00000506161 CYB5R4Q7L1T6 521 aa19.7■□□□□ 0.74
PDLIM7-215ENST00000506161 ARMCX2Q7L311 632 aa19.7■□□□□ 0.74
PDLIM7-215ENST00000506161 CCDC144CPQ8IYA2 1237 aa19.7■□□□□ 0.74
PDLIM7-215ENST00000506161 XPNPEP3Q9NQH7 507 aa19.7■□□□□ 0.74
PDLIM7-215ENST00000506161 ZSWIM5Q9P217 1185 aa19.7■□□□□ 0.74
PDLIM7-215ENST00000506161 ZHX1Q9UKY1 873 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-215ENST00000506161 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-215ENST00000506161 NFIBO00712 420 aa19.69■□□□□ 0.74
PDLIM7-215ENST00000506161 FDX1P10109 184 aa19.69■□□□□ 0.74
PDLIM7-215ENST00000506161 RTP1P59025 263 aa19.69■□□□□ 0.74
PDLIM7-215ENST00000506161 COL9A3Q14050 684 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-215ENST00000506161 SLC39A5Q6ZMH5 540 aa19.69■□□□□ 0.74
PDLIM7-215ENST00000506161 ZNF467Q7Z7K2 595 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-215ENST00000506161 ENAHQ8N8S7 591 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-215ENST00000506161 ESR2Q92731 530 aa19.69■□□□□ 0.74
PDLIM7-215ENST00000506161 RNF41Q9H4P4 317 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-215ENST00000506161 FBXO40Q9UH90 709 aa19.69■□□□□ 0.74
PDLIM7-215ENST00000506161 NRBP1Q9UHY1 535 aa19.69■□□□□ 0.74
PDLIM7-215ENST00000506161 CCPG1Q9ULG6 757 aa19.69■□□□□ 0.74
PDLIM7-215ENST00000506161 SYNRGQ9UMZ2 1314 aa19.69■□□□□ 0.74
PDLIM7-215ENST00000506161 ICAM1P05362 532 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms