RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 PABPC4Q13310 644 aaKnown RBP eCLIP10.77□□□□□ -0.69
PTPN20-215ENST00000505814 CTC1Q2NKJ3 1217 aa10.77□□□□□ -0.69
PTPN20-215ENST00000505814 VPS53Q5VIR6 699 aa10.77□□□□□ -0.69
PTPN20-215ENST00000505814 ZNF589Q86UQ0 364 aaPredicted RBP10.77□□□□□ -0.69
PTPN20-215ENST00000505814 CLEC10AQ8IUN9 316 aa10.77□□□□□ -0.69
PTPN20-215ENST00000505814 FAM227BQ96M60 508 aa10.77□□□□□ -0.69
PTPN20-215ENST00000505814 TXNRD2Q9NNW7 524 aa10.77□□□□□ -0.69
PTPN20-215ENST00000505814 SYNPO2Q9UMS6 1093 aa10.77□□□□□ -0.69
PTPN20-215ENST00000505814 PCDHGC3Q9UN70 934 aa10.77□□□□□ -0.69
PTPN20-215ENST00000505814 PTCH2Q9Y6C5 1203 aa10.77□□□□□ -0.69
PTPN20-215ENST00000505814 MYPNQ86TC9 1320 aa10.77□□□□□ -0.69
PTPN20-215ENST00000505814 MYH4Q9Y623 1939 aa10.76□□□□□ -0.69
PTPN20-215ENST00000505814 AXIN1O15169 862 aa10.76□□□□□ -0.69
PTPN20-215ENST00000505814 IGHA2P01877 340 aa10.76□□□□□ -0.69
PTPN20-215ENST00000505814 IRF5Q13568 498 aa10.76□□□□□ -0.69
PTPN20-215ENST00000505814 CATSPERGQ6ZRH7 1159 aa10.76□□□□□ -0.69
PTPN20-215ENST00000505814 CCDC129Q6ZRS4 1044 aa10.76□□□□□ -0.69
PTPN20-215ENST00000505814 SLC17A8Q8NDX2 589 aa10.76□□□□□ -0.69
PTPN20-215ENST00000505814 GTF3C2Q8WUA4 911 aaPredicted RBP10.76□□□□□ -0.69
PTPN20-215ENST00000505814 USP6NLQ92738 828 aa10.76□□□□□ -0.69
PTPN20-215ENST00000505814 MRGPRX2Q96LB1 330 aa10.76□□□□□ -0.69
PTPN20-215ENST00000505814 P2RX7Q99572 595 aaKnown RBP10.76□□□□□ -0.69
PTPN20-215ENST00000505814 TRIM34Q9BYJ4 488 aa10.76□□□□□ -0.69
PTPN20-215ENST00000505814 RBPJLQ9UBG7 517 aa10.76□□□□□ -0.69
PTPN20-215ENST00000505814 DOCK3Q8IZD9 2030 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 COL11A1P12107 1806 aaPredicted RBP10.75□□□□□ -0.69
PTPN20-215ENST00000505814 PSMC4P43686 418 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 WNT7BP56706 349 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 ICA1Q05084 483 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 NMIQ13287 307 aaPredicted RBP10.75□□□□□ -0.69
PTPN20-215ENST00000505814 B4GALNT3Q6L9W6 998 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 LPAR1Q92633 364 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 NUDT12Q9BQG2 462 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 BCL11AQ9H165 835 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 IL25Q9H293 177 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 VCPKMTQ9H867 229 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 CABP5Q9NP86 173 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 TMOD4Q9NZQ9 345 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 GJD2Q9UKL4 321 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 ADAMTS5Q9UNA0 930 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 CCDC171Q6TFL3 1326 aa10.75□□□□□ -0.69
PTPN20-215ENST00000505814 USP17L15C9J2P7 530 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 USP17L13C9JLJ4 530 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 USP17L11C9JVI0 530 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 USP17L18D6R9N7 530 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 USP17L22D6RA61 530 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 USP17L17D6RBQ6 530 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 USP17L19D6RCP7 530 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 USP17L20D6RJB6 530 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 ORC4O43929 436 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 NDUFV2P19404 249 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 SDSP20132 328 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 IRX6P78412 446 aaPredicted RBP10.74□□□□□ -0.69
PTPN20-215ENST00000505814 PRKCZQ05513 592 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 PPARAQ07869 468 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 USP17L24Q0WX57 530 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 RAB3GAP1Q15042 981 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 ARHGEF6Q15052 776 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 MCMDC2Q4G0Z9 681 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 TTC22Q5TAA0 569 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 SMCR8Q8TEV9 937 aaPredicted RBP10.74□□□□□ -0.69
PTPN20-215ENST00000505814 MKL1Q969V6 931 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 DDRGK1Q96HY6 314 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 KANSL2Q9H9L4 492 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 NYAP2Q9P242 653 aa10.74□□□□□ -0.69
PTPN20-215ENST00000505814 MOXD2PA6NHM9 499 aa10.73□□□□□ -0.69
PTPN20-215ENST00000505814 WDR46O15213 610 aaKnown RBP10.73□□□□□ -0.69
PTPN20-215ENST00000505814 HSPD1P10809 573 aaKnown RBP10.73□□□□□ -0.69
PTPN20-215ENST00000505814 EEF2P13639 858 aaKnown RBP10.73□□□□□ -0.69
PTPN20-215ENST00000505814 SMPD1P17405 629 aa10.73□□□□□ -0.69
PTPN20-215ENST00000505814 TDO2P48775 406 aa10.73□□□□□ -0.69
PTPN20-215ENST00000505814 SMCPP49901 116 aaPredicted RBP10.73□□□□□ -0.69
PTPN20-215ENST00000505814 FCGRTP55899 365 aa10.73□□□□□ -0.69
PTPN20-215ENST00000505814 ERVK-9P63128 1117 aa10.73□□□□□ -0.69
PTPN20-215ENST00000505814 ERVK-24P63145 666 aa10.73□□□□□ -0.69
PTPN20-215ENST00000505814 AMOTL1Q8IY63 956 aa10.73□□□□□ -0.69
PTPN20-215ENST00000505814 ANKRD13CQ8N6S4 541 aa10.73□□□□□ -0.69
PTPN20-215ENST00000505814 REPS2Q8NFH8 660 aa10.73□□□□□ -0.69
PTPN20-215ENST00000505814 NEDD1Q8NHV4 660 aa10.73□□□□□ -0.69
PTPN20-215ENST00000505814 GABRQQ9UN88 632 aa10.73□□□□□ -0.69
PTPN20-215ENST00000505814 RABGAP1Q9Y3P9 1069 aa10.73□□□□□ -0.69
PTPN20-215ENST00000505814 FRMPD3Q5JV73 1810 aa10.72□□□□□ -0.69
PTPN20-215ENST00000505814 PEX10O60683 326 aa10.72□□□□□ -0.69
PTPN20-215ENST00000505814 FGAP02671 866 aa10.72□□□□□ -0.69
PTPN20-215ENST00000505814 FXR1P51114 621 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTPN20-215ENST00000505814 IRX3P78415 501 aaPredicted RBP10.72□□□□□ -0.69
PTPN20-215ENST00000505814 KIF22Q14807 665 aa10.72□□□□□ -0.69
PTPN20-215ENST00000505814 UBE2Q1Q7Z7E8 422 aa10.72□□□□□ -0.69
PTPN20-215ENST00000505814 FEZ1Q99689 392 aa10.72□□□□□ -0.69
PTPN20-215ENST00000505814 NACAP1Q9BZK3 213 aa10.72□□□□□ -0.69
PTPN20-215ENST00000505814 NAPBQ9H115 298 aa10.72□□□□□ -0.69
PTPN20-215ENST00000505814 PORCNQ9H237 461 aa10.72□□□□□ -0.69
PTPN20-215ENST00000505814 RPAP3Q9H6T3 665 aaPredicted RBP10.72□□□□□ -0.69
PTPN20-215ENST00000505814 SH2D4AQ9H788 454 aa10.72□□□□□ -0.69
PTPN20-215ENST00000505814 ARHGEF10LQ9HCE6 1279 aa10.72□□□□□ -0.69
PTPN20-215ENST00000505814 MTMR4Q9NYA4 1195 aa10.72□□□□□ -0.69
PTPN20-215ENST00000505814 BTBD7Q9P203 1132 aa10.72□□□□□ -0.69
PTPN20-215ENST00000505814 RAD50Q92878 1312 aa10.72□□□□□ -0.69
PTPN20-215ENST00000505814 HOXC6P09630 235 aa10.71□□□□□ -0.69
PTPN20-215ENST00000505814 FLT3LGP49771 235 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms