RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 MYO5AQ9Y4I1 1855 aaKnown RBP11.85□□□□□ -0.51
NEDD9-210ENST00000505589 GTPBP6O43824 516 aaPredicted RBP11.85□□□□□ -0.51
NEDD9-210ENST00000505589 MBD4O95243 580 aa11.85□□□□□ -0.51
NEDD9-210ENST00000505589 PFKMP08237 780 aa11.85□□□□□ -0.51
NEDD9-210ENST00000505589 SUPT20HL2P0C7V6 817 aa11.85□□□□□ -0.51
NEDD9-210ENST00000505589 PLA2G5P39877 138 aa11.85□□□□□ -0.51
NEDD9-210ENST00000505589 TNFAIP2Q03169 654 aa11.85□□□□□ -0.51
NEDD9-210ENST00000505589 NOL8Q76FK4 1167 aaKnown RBP11.85□□□□□ -0.51
NEDD9-210ENST00000505589 C16orf59Q7L2K0 433 aa11.85□□□□□ -0.51
NEDD9-210ENST00000505589 FAM126BQ8IXS8 530 aa11.85□□□□□ -0.51
NEDD9-210ENST00000505589 CPXCR1Q8N123 301 aa11.85□□□□□ -0.51
NEDD9-210ENST00000505589 USP38Q8NB14 1042 aa11.85□□□□□ -0.51
NEDD9-210ENST00000505589 MKL1Q969V6 931 aa11.85□□□□□ -0.51
NEDD9-210ENST00000505589 PPP1R12CQ9BZL4 782 aa11.85□□□□□ -0.51
NEDD9-210ENST00000505589 IL1RAPL2Q9NP60 686 aa11.85□□□□□ -0.51
NEDD9-210ENST00000505589 SLC4A7Q9Y6M7 1214 aa11.85□□□□□ -0.51
NEDD9-210ENST00000505589 KIF28PB7ZC32 967 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 CD4P01730 458 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 ACRP10323 421 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 CYP2D6P10635 497 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 ACTN1P12814 892 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 ATP5JP18859 108 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 SLC4A3P48751 1232 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 CCDC85BQ15834 202 aaPredicted RBP11.84□□□□□ -0.51
NEDD9-210ENST00000505589 LRRFIP1Q32MZ4 808 aaKnown RBP11.84□□□□□ -0.51
NEDD9-210ENST00000505589 TKFCQ3LXA3 575 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 SBK1Q52WX2 424 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 IQSEC1Q6DN90 963 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 CTR9Q6PD62 1173 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 CHURC1Q8WUH1 139 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 HIPK3Q9H422 1215 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 COG5Q9UP83 839 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 TNNQ9UQP3 1299 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 PCDHA11Q9Y5I1 949 aa11.84□□□□□ -0.51
NEDD9-210ENST00000505589 A0A0G2JMZ2 1700 aa11.83□□□□□ -0.52
NEDD9-210ENST00000505589 GRXCR1A8MXD5 290 aa11.83□□□□□ -0.52
NEDD9-210ENST00000505589 PRKAB2O43741 272 aa11.83□□□□□ -0.52
NEDD9-210ENST00000505589 GNAT2P19087 354 aa11.83□□□□□ -0.52
NEDD9-210ENST00000505589 PBX2P40425 430 aa11.83□□□□□ -0.52
NEDD9-210ENST00000505589 ITGA7Q13683 1181 aa11.83□□□□□ -0.52
NEDD9-210ENST00000505589 PPP2R2DQ66LE6 453 aa11.83□□□□□ -0.52
NEDD9-210ENST00000505589 ARMCX2Q7L311 632 aa11.83□□□□□ -0.52
NEDD9-210ENST00000505589 SLC43A3Q8NBI5 491 aa11.83□□□□□ -0.52
NEDD9-210ENST00000505589 KIFC2Q96AC6 838 aa11.83□□□□□ -0.52
NEDD9-210ENST00000505589 BOLA2Q9H3K6 86 aa11.83□□□□□ -0.52
NEDD9-210ENST00000505589 SLC38A10Q9HBR0 1119 aa11.83□□□□□ -0.52
NEDD9-210ENST00000505589 CLIP2Q9UDT6 1046 aa11.83□□□□□ -0.52
NEDD9-210ENST00000505589 ZBED9Q6R2W3 1325 aa11.83□□□□□ -0.52
NEDD9-210ENST00000505589 TTLL1O95922 423 aa11.82□□□□□ -0.52
NEDD9-210ENST00000505589 SLC3A2P08195 630 aaKnown RBP11.82□□□□□ -0.52
NEDD9-210ENST00000505589 POU3F3P20264 500 aaPredicted RBP11.82□□□□□ -0.52
NEDD9-210ENST00000505589 BRDTQ58F21 947 aaPredicted RBP11.82□□□□□ -0.52
NEDD9-210ENST00000505589 OTOP2Q7RTS6 562 aa11.82□□□□□ -0.52
NEDD9-210ENST00000505589 CCDC144CPQ8IYA2 1237 aa11.82□□□□□ -0.52
NEDD9-210ENST00000505589 PHOSPHO2Q8TCD6 241 aa11.82□□□□□ -0.52
NEDD9-210ENST00000505589 HAUS7Q99871 368 aa11.82□□□□□ -0.52
NEDD9-210ENST00000505589 NKX2-4Q9H2Z4 354 aa11.82□□□□□ -0.52
NEDD9-210ENST00000505589 ACAD9Q9H845 621 aa11.82□□□□□ -0.52
NEDD9-210ENST00000505589 COG6Q9Y2V7 657 aa11.82□□□□□ -0.52
NEDD9-210ENST00000505589 HCN4Q9Y3Q4 1203 aa11.82□□□□□ -0.52
NEDD9-210ENST00000505589 RIPK3Q9Y572 518 aa11.82□□□□□ -0.52
NEDD9-210ENST00000505589 LOC102724159A0A0B4J2E5 919 aa11.81□□□□□ -0.52
NEDD9-210ENST00000505589 ERC2O15083 957 aa11.81□□□□□ -0.52
NEDD9-210ENST00000505589 NDUFB10O96000 172 aa11.81□□□□□ -0.52
NEDD9-210ENST00000505589 BMP3P12645 472 aa11.81□□□□□ -0.52
NEDD9-210ENST00000505589 CYP2C18P33260 490 aa11.81□□□□□ -0.52
NEDD9-210ENST00000505589 PWP2Q15269 919 aaKnown RBP11.81□□□□□ -0.52
NEDD9-210ENST00000505589 SKIV2LQ15477 1246 aaKnown RBP11.81□□□□□ -0.52
NEDD9-210ENST00000505589 FSCN1Q16658 493 aaKnown RBP11.81□□□□□ -0.52
NEDD9-210ENST00000505589 TMEM67Q5HYA8 995 aa11.81□□□□□ -0.52
NEDD9-210ENST00000505589 FAM160B2Q86V87 743 aa11.81□□□□□ -0.52
NEDD9-210ENST00000505589 CLEC10AQ8IUN9 316 aa11.81□□□□□ -0.52
NEDD9-210ENST00000505589 LENG1Q96BZ8 264 aaPredicted RBP11.81□□□□□ -0.52
NEDD9-210ENST00000505589 MPHOSPH6Q99547 160 aaKnown RBP11.81□□□□□ -0.52
NEDD9-210ENST00000505589 RAVER2Q9HCJ3 691 aaKnown RBP11.81□□□□□ -0.52
NEDD9-210ENST00000505589 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
NEDD9-210ENST00000505589 POLR3EQ9NVU0 708 aa11.81□□□□□ -0.52
NEDD9-210ENST00000505589 NAV1Q8NEY1 1877 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 PLXNA1Q9UIW2 1896 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 MYADML2A6NDP7 307 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 ZBBXA8MT70 800 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 MINDY4BA8MYZ0 360 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 DYNC1LI2O43237 492 aaPredicted RBP11.8□□□□□ -0.52
NEDD9-210ENST00000505589 PLA2G6O60733 806 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 ZFYP08048 801 aaPredicted RBP11.8□□□□□ -0.52
NEDD9-210ENST00000505589 BMP1P13497 986 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 ATP2A2P16615 1042 aaKnown RBP11.8□□□□□ -0.52
NEDD9-210ENST00000505589 RFC2P35250 354 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 STAT2P52630 851 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 EVX2Q03828 476 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 PDE4BQ07343 736 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 ADGRE1Q14246 886 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 CXCL17Q6UXB2 119 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 GMCL1P1Q8NEA9 526 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 ADD3Q9UEY8 706 aaKnown RBP11.8□□□□□ -0.52
NEDD9-210ENST00000505589 PNMA2Q9UL42 364 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 DDX19BQ9UMR2 479 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 MYH8P13535 1937 aa11.8□□□□□ -0.52
NEDD9-210ENST00000505589 MYO9BQ13459 2157 aa11.79□□□□□ -0.52
NEDD9-210ENST00000505589 TTC28Q96AY4 2481 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms