RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 AMOTL1Q8IY63 956 aa13.92□□□□□ -0.18
CCHCR1-219ENST00000505392 ANKRD35Q8N283 1001 aa13.92□□□□□ -0.18
CCHCR1-219ENST00000505392 PRPF38AQ8NAV1 312 aaKnown RBP13.92□□□□□ -0.18
CCHCR1-219ENST00000505392 SLC43A3Q8NBI5 491 aa13.92□□□□□ -0.18
CCHCR1-219ENST00000505392 DNAJC2Q99543 621 aaKnown RBP13.92□□□□□ -0.18
CCHCR1-219ENST00000505392 IL1RAPL2Q9NP60 686 aa13.92□□□□□ -0.18
CCHCR1-219ENST00000505392 EXOC6BQ9Y2D4 811 aa13.92□□□□□ -0.18
CCHCR1-219ENST00000505392 CTDP1Q9Y5B0 961 aaPredicted RBP13.92□□□□□ -0.18
CCHCR1-219ENST00000505392 PCDHA11Q9Y5I1 949 aa13.92□□□□□ -0.18
CCHCR1-219ENST00000505392 TCF20Q9UGU0 1960 aaKnown RBP13.92□□□□□ -0.18
CCHCR1-219ENST00000505392 CHD7Q9P2D1 2997 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 BDP1A6H8Y1 2624 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 ZBBXA8MT70 800 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 F5H6K3 240 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 GTPBP6O43824 516 aaPredicted RBP13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 ZBED4O75132 1171 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 MBD4O95243 580 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 NKX3-2P78367 333 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 TNFAIP2Q03169 654 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 KLRC3Q07444 240 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 TMEM31Q5JXX7 168 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 CCDC144CPQ8IYA2 1237 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 FGD4Q96M96 766 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 TRPV6Q9H1D0 765 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 CERS4Q9HA82 394 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 RAVER2Q9HCJ3 691 aaKnown RBP13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 MTCH2Q9Y6C9 303 aa13.91□□□□□ -0.18
CCHCR1-219ENST00000505392 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.9□□□□□ -0.18
CCHCR1-219ENST00000505392 ATP2A1O14983 1001 aa13.9□□□□□ -0.18
CCHCR1-219ENST00000505392 TLL1O43897 1013 aa13.9□□□□□ -0.18
CCHCR1-219ENST00000505392 CABYRO75952 493 aa13.9□□□□□ -0.18
CCHCR1-219ENST00000505392 ATP2A2P16615 1042 aaKnown RBP13.9□□□□□ -0.18
CCHCR1-219ENST00000505392 TMEM67Q5HYA8 995 aa13.9□□□□□ -0.18
CCHCR1-219ENST00000505392 ERC1Q8IUD2 1116 aa13.9□□□□□ -0.18
CCHCR1-219ENST00000505392 DDRGK1Q96HY6 314 aa13.9□□□□□ -0.18
CCHCR1-219ENST00000505392 NOC4LQ9BVI4 516 aaKnown RBP13.9□□□□□ -0.18
CCHCR1-219ENST00000505392 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.9□□□□□ -0.18
CCHCR1-219ENST00000505392 BCL11AQ9H165 835 aa13.9□□□□□ -0.18
CCHCR1-219ENST00000505392 WNT8AQ9H1J5 351 aa13.9□□□□□ -0.18
CCHCR1-219ENST00000505392 GRIN2DO15399 1336 aa13.9□□□□□ -0.19
CCHCR1-219ENST00000505392 DYNC1LI2O43237 492 aaPredicted RBP13.89□□□□□ -0.19
CCHCR1-219ENST00000505392 B4GALT4O60513 344 aa13.89□□□□□ -0.19
CCHCR1-219ENST00000505392 POU3F3P20264 500 aaPredicted RBP13.89□□□□□ -0.19
CCHCR1-219ENST00000505392 CTR9Q6PD62 1173 aa13.89□□□□□ -0.19
CCHCR1-219ENST00000505392 KIFC2Q96AC6 838 aa13.89□□□□□ -0.19
CCHCR1-219ENST00000505392 SCLYQ96I15 445 aa13.89□□□□□ -0.19
CCHCR1-219ENST00000505392 KATNBL1Q9H079 304 aa13.89□□□□□ -0.19
CCHCR1-219ENST00000505392 FBXO40Q9UH90 709 aa13.89□□□□□ -0.19
CCHCR1-219ENST00000505392 COG5Q9UP83 839 aa13.89□□□□□ -0.19
CCHCR1-219ENST00000505392 ASTN1O14525 1302 aa13.89□□□□□ -0.19
CCHCR1-219ENST00000505392 REV3LO60673 3130 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 ZEB2O60315 1214 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 NDUFB10O96000 172 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 CA3P07451 260 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 ADD2P35612 726 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 CNTN2Q02246 1040 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 TTLL4Q14679 1199 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 FSCN1Q16658 493 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 KRT40Q6A162 431 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 CEP85Q6P2H3 762 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 ITPRIPQ8IWB1 547 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 STK11IPQ8N1F8 1099 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 CHST13Q8NET6 341 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 RHPN1Q8TCX5 695 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 VWCEQ96DN2 955 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 SEZ6LQ9BYH1 1024 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 AP5M1Q9H0R1 490 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 NYAP2Q9P242 653 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 CLIP2Q9UDT6 1046 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 GNEQ9Y223 722 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 SLC4A4Q9Y6R1 1079 aa13.88□□□□□ -0.19
CCHCR1-219ENST00000505392 GPR37L1O60883 481 aa13.87□□□□□ -0.19
CCHCR1-219ENST00000505392 PTGS1P23219 599 aa13.87□□□□□ -0.19
CCHCR1-219ENST00000505392 PSMC6P62333 389 aa13.87□□□□□ -0.19
CCHCR1-219ENST00000505392 DEFB128Q7Z7B8 93 aa13.87□□□□□ -0.19
CCHCR1-219ENST00000505392 TLK2Q86UE8 772 aa13.87□□□□□ -0.19
CCHCR1-219ENST00000505392 CLASRPQ8N2M8 674 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-219ENST00000505392 KHSRPQ92945 711 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCHCR1-219ENST00000505392 HLA-CQ95604 372 aa13.87□□□□□ -0.19
CCHCR1-219ENST00000505392 AGBL1Q96MI9 1066 aa13.87□□□□□ -0.19
CCHCR1-219ENST00000505392 BOLA2Q9H3K6 86 aa13.87□□□□□ -0.19
CCHCR1-219ENST00000505392 SLC38A10Q9HBR0 1119 aa13.87□□□□□ -0.19
CCHCR1-219ENST00000505392 HOMER2Q9NSB8 354 aa13.87□□□□□ -0.19
CCHCR1-219ENST00000505392 COL11A1P12107 1806 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-219ENST00000505392 EPOPA6NHQ4 379 aa13.86□□□□□ -0.19
CCHCR1-219ENST00000505392 CHGBP05060 677 aa13.86□□□□□ -0.19
CCHCR1-219ENST00000505392 IFIT2P09913 472 aaKnown RBP13.86□□□□□ -0.19
CCHCR1-219ENST00000505392 SMPD1P17405 629 aa13.86□□□□□ -0.19
CCHCR1-219ENST00000505392 HSP90AB4PQ58FF6 505 aa13.86□□□□□ -0.19
CCHCR1-219ENST00000505392 ALYREFQ86V81 257 aaKnown RBP13.86□□□□□ -0.19
CCHCR1-219ENST00000505392 FTSJ3Q8IY81 847 aaKnown RBP13.86□□□□□ -0.19
CCHCR1-219ENST00000505392 ARNTL2Q8WYA1 636 aa13.86□□□□□ -0.19
CCHCR1-219ENST00000505392 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.86□□□□□ -0.192e-6■■■□□ 15.9
CCHCR1-219ENST00000505392 MKNK2Q9HBH9 465 aa13.86□□□□□ -0.19
CCHCR1-219ENST00000505392 C11orf16Q9NQ32 467 aa13.86□□□□□ -0.19
CCHCR1-219ENST00000505392 PDGFCQ9NRA1 345 aa13.86□□□□□ -0.19
CCHCR1-219ENST00000505392 PAG1Q9NWQ8 432 aa13.86□□□□□ -0.19
CCHCR1-219ENST00000505392 NAV1Q8NEY1 1877 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms