RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CHURC1Q8WUH1 139 aa9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 ASTN1O14525 1302 aa9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 ZBTB43O43298 467 aa9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 EDIL3O43854 480 aa9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 HTRA3P83110 453 aa9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 PNMA6FA0A0J9YX94 578 aa9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 KLF18A0A0U1RQI7 1052 aa9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 NUP88Q99567 741 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 UPF3BQ9BZI7 483 aaKnown RBP9.66□□□□□ -0.86
CDC42SE2-208ENST00000505065 STXBP3O00186 592 aa9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 ZBTB5O15062 677 aa9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 HSPA8P11142 646 aaKnown RBP9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 EDNRBP24530 442 aa9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 KIF5BP33176 963 aa9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 ERVK-9P63128 1117 aa9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 ERVK-24P63145 666 aa9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 RRP12Q5JTH9 1297 aaKnown RBP9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 KATNBL1Q9H079 304 aa9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 RBM27Q9P2N5 1060 aaKnown RBP9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 DIS3Q9Y2L1 958 aaKnown RBP9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 SLC12A7Q9Y666 1083 aa9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 ABCB11O95342 1321 aa9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 TTLL12Q14166 644 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 FBXO28Q9NVF7 368 aa9.65□□□□□ -0.86
CDC42SE2-208ENST00000505065 KLRF2D3W0D1 207 aa9.65□□□□□ -0.87
CDC42SE2-208ENST00000505065 SLC25A27O95847 323 aa9.65□□□□□ -0.87
CDC42SE2-208ENST00000505065 Q3C1V9 767 aa9.65□□□□□ -0.87
CDC42SE2-208ENST00000505065 ATG4CQ96DT6 458 aa9.65□□□□□ -0.87
CDC42SE2-208ENST00000505065 LRRC2Q9BYS8 371 aa9.65□□□□□ -0.87
CDC42SE2-208ENST00000505065 ERICH2A1L162 156 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 SLC1A4P43007 532 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 MAMDC4Q6UXC1 1216 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 CHST13Q8NET6 341 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 BARHL2Q9NY43 387 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 STX8Q9UNK0 236 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 RTN1Q16799 776 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 ZNF792Q3KQV3 632 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 SPATC1LQ9H0A9 340 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 ZMYND12Q9H0C1 365 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 MROH8Q9H579 483 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 CEP350Q5VT06 3117 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 CCDC69A6NI79 296 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 NEK4P51957 841 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 TYW1BQ6NUM6 668 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 KCTD1Q719H9 257 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 TMX3Q96JJ7 454 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 TCEANC2Q96MN5 208 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 PHF20Q9BVI0 1012 aa9.64□□□□□ -0.87
CDC42SE2-208ENST00000505065 CCDC196A0A1B0GTZ2 297 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 MSL3Q8N5Y2 521 aaKnown RBP9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 MBOAT7Q96N66 472 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 ZFYVE28Q9HCC9 887 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 XRCC5P13010 732 aaKnown RBP9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 METAP2P50579 478 aaKnown RBP eCLIP9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 MOV10L1Q9BXT6 1211 aaKnown RBP9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 RBM47A0AV96 593 aaKnown RBP9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 TMEM232C9JQI7 657 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 LACTBP83111 547 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 QRICH1Q2TAL8 776 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 OLFML2BQ68BL8 750 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 OTUD7BQ6GQQ9 843 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 GADL1Q6ZQY3 521 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 STK11IPQ8N1F8 1099 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 FAM133AQ8N9E0 248 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 UPF2Q9HAU5 1272 aaKnown RBP9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 RIPK3Q9Y572 518 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 LTBP2Q14767 1821 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 CYP2C8P10632 490 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 CDC37Q16543 378 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 CCDC96Q2M329 555 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 PRDM10Q9NQV6 1147 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 TANC1Q9C0D5 1861 aa9.63□□□□□ -0.87
CDC42SE2-208ENST00000505065 FRMPD2Q68DX3 1309 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 GOLGA8BA8MQT2 603 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 MEIS2O14770 477 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 ADD1P35611 737 aaKnown RBP9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 MYL10Q9BUA6 226 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 TEX13BQ9BXU2 312 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 MAPK4P31152 587 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 PRMT2P55345 433 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 MAP3K21Q5TCX8 1036 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 WWC2Q6AWC2 1192 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 CHMP4CQ96CF2 233 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 SLC15A5A6NIM6 579 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 GOLGA8AA7E2F4 631 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 ST18O60284 1047 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 SPICE1Q8N0Z3 855 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 GPRC5AQ8NFJ5 357 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 RIC8AQ9NPQ8 531 aa9.62□□□□□ -0.87
CDC42SE2-208ENST00000505065 K7ELQ4 463 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 PTPREP23469 700 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 GALNT17Q6IS24 598 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 NRBP1Q9UHY1 535 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 TCHHQ07283 1943 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 GPR25O00155 361 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 STRNO43815 780 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 PFASO15067 1338 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 ADAMTS3O15072 1205 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 DEXIO95424 95 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 CTCFLQ8NI51 663 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms