RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 SAMD1Q6SPF0 538 aaPredicted RBP19.75■□□□□ 0.75
SYNE4-207ENST00000505054 KCTD1Q719H9 257 aa19.75■□□□□ 0.75
SYNE4-207ENST00000505054 PNMA1Q8ND90 353 aa19.75■□□□□ 0.75
SYNE4-207ENST00000505054 DCAF4Q8WV16 495 aa19.75■□□□□ 0.75
SYNE4-207ENST00000505054 SLF1Q9BQI6 1058 aa19.75■□□□□ 0.75
SYNE4-207ENST00000505054 SENP2Q9HC62 589 aa19.75■□□□□ 0.75
SYNE4-207ENST00000505054 MTMR10Q9NXD2 777 aa19.75■□□□□ 0.75
SYNE4-207ENST00000505054 FLRT1Q9NZU1 646 aa19.75■□□□□ 0.75
SYNE4-207ENST00000505054 ADAMTS5Q9UNA0 930 aa19.75■□□□□ 0.75
SYNE4-207ENST00000505054 SNX14Q9Y5W7 946 aa19.75■□□□□ 0.75
SYNE4-207ENST00000505054 IFIT3O14879 490 aaKnown RBP19.74■□□□□ 0.75
SYNE4-207ENST00000505054 PRC1O43663 620 aa19.74■□□□□ 0.75
SYNE4-207ENST00000505054 HOXC6P09630 235 aa19.74■□□□□ 0.75
SYNE4-207ENST00000505054 C8orf34Q49A92 452 aa19.74■□□□□ 0.75
SYNE4-207ENST00000505054 IFIT1BQ5T764 474 aaKnown RBP19.74■□□□□ 0.75
SYNE4-207ENST00000505054 IGDCC4Q8TDY8 1250 aa19.74■□□□□ 0.75
SYNE4-207ENST00000505054 NEK1Q96PY6 1258 aa19.74■□□□□ 0.75
SYNE4-207ENST00000505054 KAT14Q9H8E8 782 aa19.74■□□□□ 0.75
SYNE4-207ENST00000505054 GPHNQ9NQX3 736 aaPredicted RBP19.74■□□□□ 0.75
SYNE4-207ENST00000505054 DDX20Q9UHI6 824 aaKnown RBP19.74■□□□□ 0.75
SYNE4-207ENST00000505054 FEM1BQ9UK73 627 aa19.74■□□□□ 0.75
SYNE4-207ENST00000505054 TMEM232C9JQI7 657 aa19.73■□□□□ 0.75
SYNE4-207ENST00000505054 VWA5AO00534 786 aa19.73■□□□□ 0.75
SYNE4-207ENST00000505054 MCM5P33992 734 aa19.73■□□□□ 0.75
SYNE4-207ENST00000505054 MDM2Q00987 491 aaPredicted RBP19.73■□□□□ 0.75
SYNE4-207ENST00000505054 KRT32Q14532 448 aa19.73■□□□□ 0.75
SYNE4-207ENST00000505054 CCDC96Q2M329 555 aa19.73■□□□□ 0.75
SYNE4-207ENST00000505054 TMEM67Q5HYA8 995 aa19.73■□□□□ 0.75
SYNE4-207ENST00000505054 MB21D1Q8N884 522 aa19.73■□□□□ 0.75
SYNE4-207ENST00000505054 REPS2Q8NFH8 660 aa19.73■□□□□ 0.75
SYNE4-207ENST00000505054 ISY1Q9ULR0 285 aaKnown RBP19.73■□□□□ 0.75
SYNE4-207ENST00000505054 SEC24BO95487 1268 aa19.72■□□□□ 0.75
SYNE4-207ENST00000505054 ZNF543Q08ER8 600 aa19.72■□□□□ 0.75
SYNE4-207ENST00000505054 WTAPQ15007 396 aa19.72■□□□□ 0.75
SYNE4-207ENST00000505054 SART3Q15020 963 aaKnown RBP19.72■□□□□ 0.75
SYNE4-207ENST00000505054 PRPF38AQ8NAV1 312 aaKnown RBP19.72■□□□□ 0.75
SYNE4-207ENST00000505054 MTA3Q9BTC8 594 aa19.72■□□□□ 0.75
SYNE4-207ENST00000505054 FRMPD2Q68DX3 1309 aaPredicted RBP19.72■□□□□ 0.75
SYNE4-207ENST00000505054 A0A0C4DFX4 3053 aa19.72■□□□□ 0.75
SYNE4-207ENST00000505054 CUL9Q8IWT3 2517 aa19.71■□□□□ 0.75
SYNE4-207ENST00000505054 ERICH2A1L162 156 aa19.71■□□□□ 0.75
SYNE4-207ENST00000505054 DNM1LO00429 736 aa19.71■□□□□ 0.75
SYNE4-207ENST00000505054 SH2B2O14492 632 aaPredicted RBP19.71■□□□□ 0.75
SYNE4-207ENST00000505054 PLA2G6O60733 806 aa19.71■□□□□ 0.75
SYNE4-207ENST00000505054 STAT2P52630 851 aa19.71■□□□□ 0.75
SYNE4-207ENST00000505054 TMEM132BQ14DG7 1078 aa19.71■□□□□ 0.75
SYNE4-207ENST00000505054 TTBK2Q6IQ55 1244 aa19.71■□□□□ 0.75
SYNE4-207ENST00000505054 FAM160B2Q86V87 743 aa19.71■□□□□ 0.75
SYNE4-207ENST00000505054 NPLOC4Q8TAT6 608 aa19.71■□□□□ 0.75
SYNE4-207ENST00000505054 KIFC2Q96AC6 838 aa19.71■□□□□ 0.75
SYNE4-207ENST00000505054 LRRC2Q9BYS8 371 aa19.71■□□□□ 0.75
SYNE4-207ENST00000505054 SENP6Q9GZR1 1112 aaPredicted RBP19.71■□□□□ 0.75
SYNE4-207ENST00000505054 LY9Q9HBG7 655 aa19.71■□□□□ 0.75
SYNE4-207ENST00000505054 CYBAP13498 195 aa19.7■□□□□ 0.74
SYNE4-207ENST00000505054 CNGA1P29973 690 aa19.7■□□□□ 0.74
SYNE4-207ENST00000505054 EXOSC10Q01780 885 aaKnown RBP19.7■□□□□ 0.74
SYNE4-207ENST00000505054 BTNL9Q6UXG8 535 aa19.7■□□□□ 0.74
SYNE4-207ENST00000505054 CHURC1Q8WUH1 139 aa19.7■□□□□ 0.74
SYNE4-207ENST00000505054 TMEM87BQ96K49 555 aa19.7■□□□□ 0.74
SYNE4-207ENST00000505054 JAKMIP1Q96N16 626 aaKnown RBP19.7■□□□□ 0.74
SYNE4-207ENST00000505054 MOV10L1Q9BXT6 1211 aaKnown RBP19.7■□□□□ 0.74
SYNE4-207ENST00000505054 SPATC1LQ9H0A9 340 aa19.7■□□□□ 0.74
SYNE4-207ENST00000505054 GPCPD1Q9NPB8 672 aa19.7■□□□□ 0.74
SYNE4-207ENST00000505054 ZNF214Q9UL59 606 aaPredicted RBP19.7■□□□□ 0.74
SYNE4-207ENST00000505054 WDR19Q8NEZ3 1342 aa19.7■□□□□ 0.74
SYNE4-207ENST00000505054 IGHA2P01877 340 aa19.69■□□□□ 0.74
SYNE4-207ENST00000505054 GOLGA8HP0CJ92 632 aa19.69■□□□□ 0.74
SYNE4-207ENST00000505054 CPA1P15085 419 aa19.69■□□□□ 0.74
SYNE4-207ENST00000505054 CYP2C19P33261 490 aa19.69■□□□□ 0.74
SYNE4-207ENST00000505054 SLC16A2P36021 539 aa19.69■□□□□ 0.74
SYNE4-207ENST00000505054 IKQ13123 557 aaPredicted RBP19.69■□□□□ 0.74
SYNE4-207ENST00000505054 DHX32Q7L7V1 743 aaKnown RBP19.69■□□□□ 0.74
SYNE4-207ENST00000505054 TCEANC2Q96MN5 208 aa19.69■□□□□ 0.74
SYNE4-207ENST00000505054 LBHD1Q9BQE6 289 aaPredicted RBP19.69■□□□□ 0.74
SYNE4-207ENST00000505054 SLC38A10Q9HBR0 1119 aa19.69■□□□□ 0.74
SYNE4-207ENST00000505054 PRR12Q9ULL5 1215 aa19.69■□□□□ 0.74
SYNE4-207ENST00000505054 COL11A1P12107 1806 aaPredicted RBP19.68■□□□□ 0.74
SYNE4-207ENST00000505054 OLFML2BQ68BL8 750 aa19.68■□□□□ 0.74
SYNE4-207ENST00000505054 SHCBP1Q8NEM2 672 aa19.68■□□□□ 0.74
SYNE4-207ENST00000505054 TRPV1Q8NER1 839 aa19.68■□□□□ 0.74
SYNE4-207ENST00000505054 PRKAG2Q9UGJ0 569 aa19.68■□□□□ 0.74
SYNE4-207ENST00000505054 LAMA2P24043 3122 aaKnown RBP19.67■□□□□ 0.74
SYNE4-207ENST00000505054 ZNFX1Q9P2E3 1918 aaKnown RBP19.67■□□□□ 0.74
SYNE4-207ENST00000505054 STRNO43815 780 aa19.67■□□□□ 0.74
SYNE4-207ENST00000505054 HMGB1P09429 215 aaKnown RBP19.67■□□□□ 0.74
SYNE4-207ENST00000505054 ADORA2AP29274 412 aa19.67■□□□□ 0.74
SYNE4-207ENST00000505054 LIFRP42702 1097 aa19.67■□□□□ 0.74
SYNE4-207ENST00000505054 ATN1P54259 1190 aaPredicted RBP19.67■□□□□ 0.74
SYNE4-207ENST00000505054 RTP1P59025 263 aa19.67■□□□□ 0.74
SYNE4-207ENST00000505054 TROAPQ12815 778 aa19.67■□□□□ 0.74
SYNE4-207ENST00000505054 PLS1Q14651 629 aa19.67■□□□□ 0.74
SYNE4-207ENST00000505054 GPATCH4Q5T3I0 446 aaKnown RBP19.67■□□□□ 0.74
SYNE4-207ENST00000505054 SYDE2Q5VT97 1194 aa19.67■□□□□ 0.74
SYNE4-207ENST00000505054 FAM109BQ6ICB4 259 aaPredicted RBP19.67■□□□□ 0.74
SYNE4-207ENST00000505054 DPP9Q86TI2 863 aa19.67■□□□□ 0.74
SYNE4-207ENST00000505054 CPVLQ9H3G5 476 aa19.67■□□□□ 0.74
SYNE4-207ENST00000505054 UNC80Q8N2C7 3258 aa19.67■□□□□ 0.74
SYNE4-207ENST00000505054 PLXNA1Q9UIW2 1896 aa19.67■□□□□ 0.74
SYNE4-207ENST00000505054 KBTBD13C9JR72 458 aa19.66■□□□□ 0.74
SYNE4-207ENST00000505054 ATP2A1O14983 1001 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms