RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 MDM2Q00987 491 aaPredicted RBP14.64□□□□□ -0.07
PDGFRA-204ENST00000504461 CASC1Q6TDU7 716 aa14.64□□□□□ -0.07
PDGFRA-204ENST00000504461 KCTD1Q719H9 257 aa14.64□□□□□ -0.07
PDGFRA-204ENST00000504461 RNF180Q86T96 592 aa14.64□□□□□ -0.07
PDGFRA-204ENST00000504461 FERMT2Q96AC1 680 aa14.64□□□□□ -0.07
PDGFRA-204ENST00000504461 DIAPH3Q9NSV4 1193 aa14.64□□□□□ -0.07
PDGFRA-204ENST00000504461 FAM184BQ9ULE4 1060 aa14.64□□□□□ -0.07
PDGFRA-204ENST00000504461 LTBP2Q14767 1821 aa14.64□□□□□ -0.07
PDGFRA-204ENST00000504461 SYNGAP1Q96PV0 1343 aa14.64□□□□□ -0.07
PDGFRA-204ENST00000504461 PLA2G6O60733 806 aa14.63□□□□□ -0.07
PDGFRA-204ENST00000504461 PGK1P00558 417 aa14.63□□□□□ -0.07
PDGFRA-204ENST00000504461 FGRP09769 529 aa14.63□□□□□ -0.07
PDGFRA-204ENST00000504461 ZNF865P0CJ78 1059 aaPredicted RBP14.63□□□□□ -0.07
PDGFRA-204ENST00000504461 HAND2P61296 217 aa14.63□□□□□ -0.07
PDGFRA-204ENST00000504461 CCDC96Q2M329 555 aa14.63□□□□□ -0.07
PDGFRA-204ENST00000504461 MAMDC4Q6UXC1 1216 aa14.63□□□□□ -0.07
PDGFRA-204ENST00000504461 MFSD6Q6ZSS7 791 aa14.63□□□□□ -0.07
PDGFRA-204ENST00000504461 ZNF467Q7Z7K2 595 aaPredicted RBP14.63□□□□□ -0.07
PDGFRA-204ENST00000504461 ZNF589Q86UQ0 364 aaPredicted RBP14.63□□□□□ -0.07
PDGFRA-204ENST00000504461 TDHQ8IZJ6 230 aa14.63□□□□□ -0.07
PDGFRA-204ENST00000504461 ACAD9Q9H845 621 aa14.63□□□□□ -0.07
PDGFRA-204ENST00000504461 ZHX1Q9UKY1 873 aaPredicted RBP14.63□□□□□ -0.07
PDGFRA-204ENST00000504461 TACC3Q9Y6A5 838 aa14.63□□□□□ -0.07
PDGFRA-204ENST00000504461 MYH6P13533 1939 aa14.62□□□□□ -0.07
PDGFRA-204ENST00000504461 EIF5BO60841 1220 aaKnown RBP14.62□□□□□ -0.07
PDGFRA-204ENST00000504461 SNAI1O95863 264 aaPredicted RBP14.62□□□□□ -0.07
PDGFRA-204ENST00000504461 ALAS1P13196 640 aa14.62□□□□□ -0.07
PDGFRA-204ENST00000504461 TKFCQ3LXA3 575 aa14.62□□□□□ -0.07
PDGFRA-204ENST00000504461 CCDC174Q6PII3 467 aa14.62□□□□□ -0.07
PDGFRA-204ENST00000504461 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.62□□□□□ -0.07
PDGFRA-204ENST00000504461 DCAF4Q8WV16 495 aa14.62□□□□□ -0.07
PDGFRA-204ENST00000504461 AGBL1Q96MI9 1066 aa14.62□□□□□ -0.07
PDGFRA-204ENST00000504461 TRERF1Q96PN7 1200 aa14.62□□□□□ -0.07
PDGFRA-204ENST00000504461 RNF146Q9NTX7 359 aa14.62□□□□□ -0.07
PDGFRA-204ENST00000504461 PRR12Q9ULL5 1215 aa14.62□□□□□ -0.07
PDGFRA-204ENST00000504461 ZMYM6O95789 1325 aa14.62□□□□□ -0.07
PDGFRA-204ENST00000504461 POTEB2H3BUK9 544 aa14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 SOX1O00570 391 aaPredicted RBP14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 ZNF213O14771 459 aa14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 TOP1P11387 765 aaKnown RBP14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 PCP11498 1178 aaKnown RBP14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 GSPT1P15170 499 aaKnown RBP14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 SNAP25P60880 206 aa14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 ACVR2BQ13705 512 aa14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 AKNAD1Q5T1N1 836 aa14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 CWC27Q6UX04 472 aaKnown RBP14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 LRCH3Q96II8 777 aa14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 ABHD16BQ9H3Z7 469 aa14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 RNF41Q9H4P4 317 aaPredicted RBP14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 PRDM5Q9NQX1 630 aaPredicted RBP14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 TCP11L1Q9NUJ3 509 aa14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 PHF24Q9UPV7 400 aa14.61□□□□□ -0.07
PDGFRA-204ENST00000504461 NOVP48745 357 aa14.6□□□□□ -0.07
PDGFRA-204ENST00000504461 CNTN2Q02246 1040 aa14.6□□□□□ -0.07
PDGFRA-204ENST00000504461 LRIT3Q3SXY7 679 aa14.6□□□□□ -0.07
PDGFRA-204ENST00000504461 TRIM60Q495X7 471 aa14.6□□□□□ -0.07
PDGFRA-204ENST00000504461 TMEM47Q9BQJ4 181 aa14.6□□□□□ -0.07
PDGFRA-204ENST00000504461 TSEN34Q9BSV6 310 aaKnown RBP14.6□□□□□ -0.07
PDGFRA-204ENST00000504461 SPC25Q9HBM1 224 aa14.6□□□□□ -0.07
PDGFRA-204ENST00000504461 GPCPD1Q9NPB8 672 aa14.6□□□□□ -0.07
PDGFRA-204ENST00000504461 ZNF536O15090 1300 aa14.6□□□□□ -0.07
PDGFRA-204ENST00000504461 DUSP11O75319 330 aaKnown RBP14.59□□□□□ -0.07
PDGFRA-204ENST00000504461 SNX17Q15036 470 aa14.59□□□□□ -0.07
PDGFRA-204ENST00000504461 C1orf53Q5VUE5 145 aa14.59□□□□□ -0.07
PDGFRA-204ENST00000504461 ARMCX2Q7L311 632 aa14.59□□□□□ -0.07
PDGFRA-204ENST00000504461 CCDC144CPQ8IYA2 1237 aa14.59□□□□□ -0.07
PDGFRA-204ENST00000504461 NUP133Q8WUM0 1156 aa14.59□□□□□ -0.07
PDGFRA-204ENST00000504461 ESR2Q92731 530 aa14.59□□□□□ -0.07
PDGFRA-204ENST00000504461 LENG1Q96BZ8 264 aaPredicted RBP14.59□□□□□ -0.07
PDGFRA-204ENST00000504461 TTC14Q96N46 770 aa14.59□□□□□ -0.07
PDGFRA-204ENST00000504461 A1CFQ9NQ94 594 aaKnown RBP14.59□□□□□ -0.07
PDGFRA-204ENST00000504461 CCPG1Q9ULG6 757 aa14.59□□□□□ -0.07
PDGFRA-204ENST00000504461 FRMPD2Q68DX3 1309 aaPredicted RBP14.59□□□□□ -0.07
PDGFRA-204ENST00000504461 LCTP09848 1927 aa14.58□□□□□ -0.07
PDGFRA-204ENST00000504461 DNAH12Q6ZR08 3092 aa14.58□□□□□ -0.07
PDGFRA-204ENST00000504461 A0A1W2PQ45 241 aaPredicted RBP14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 A0A1W2PQY0 241 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 ASB14A6NK59 587 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 ADAMTS4O75173 837 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 ICAM1P05362 532 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 CHMLP26374 656 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 SLC16A2P36021 539 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 ACLYP53396 1101 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 KCNA10Q16322 511 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 CCDC144BQ3MJ40 725 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 TTBK2Q6IQ55 1244 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 RASGRP2Q7LDG7 609 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 FAM133AQ8N9E0 248 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 GTF3C3Q9Y5Q9 886 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 RAD50Q92878 1312 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 SYNRGQ9UMZ2 1314 aa14.58□□□□□ -0.08
PDGFRA-204ENST00000504461 MOXD2PA6NHM9 499 aa14.57□□□□□ -0.08
PDGFRA-204ENST00000504461 C6orf222P0C671 652 aaPredicted RBP14.57□□□□□ -0.08
PDGFRA-204ENST00000504461 TLE2Q04725 743 aa14.57□□□□□ -0.08
PDGFRA-204ENST00000504461 MUM1L1Q5H9M0 696 aa14.57□□□□□ -0.08
PDGFRA-204ENST00000504461 SYDE2Q5VT97 1194 aa14.57□□□□□ -0.08
PDGFRA-204ENST00000504461 GPR153Q6NV75 609 aa14.57□□□□□ -0.08
PDGFRA-204ENST00000504461 BTNL9Q6UXG8 535 aa14.57□□□□□ -0.08
PDGFRA-204ENST00000504461 NSMFQ6X4W1 530 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms