RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 SEMA6BQ9H3T3 888 aa10.94□□□□□ -0.66
DHFR-202ENST00000504396 MROH8Q9H579 483 aa10.94□□□□□ -0.66
DHFR-202ENST00000504396 SH2D4AQ9H788 454 aa10.94□□□□□ -0.66
DHFR-202ENST00000504396 GPCPD1Q9NPB8 672 aa10.94□□□□□ -0.66
DHFR-202ENST00000504396 XPNPEP3Q9NQH7 507 aa10.94□□□□□ -0.66
DHFR-202ENST00000504396 EXOC6BQ9Y2D4 811 aa10.94□□□□□ -0.66
DHFR-202ENST00000504396 APBB1O00213 710 aa10.93□□□□□ -0.66
DHFR-202ENST00000504396 PQBP1O60828 265 aaKnown RBP10.93□□□□□ -0.66
DHFR-202ENST00000504396 FCER1AP12319 257 aa10.93□□□□□ -0.66
DHFR-202ENST00000504396 SMAD3P84022 425 aaKnown RBP10.93□□□□□ -0.66
DHFR-202ENST00000504396 TTF1Q15361 905 aaPredicted RBP10.93□□□□□ -0.66
DHFR-202ENST00000504396 ERC1Q8IUD2 1116 aa10.93□□□□□ -0.66
DHFR-202ENST00000504396 SCUBE3Q8IX30 993 aa10.93□□□□□ -0.66
DHFR-202ENST00000504396 SLC44A5Q8NCS7 719 aa10.93□□□□□ -0.66
DHFR-202ENST00000504396 MAML3Q96JK9 1138 aa10.93□□□□□ -0.66
DHFR-202ENST00000504396 MMP19Q99542 508 aa10.93□□□□□ -0.66
DHFR-202ENST00000504396 RIOK1Q9BRS2 568 aaKnown RBP10.93□□□□□ -0.66
DHFR-202ENST00000504396 IL1RAPL2Q9NP60 686 aa10.93□□□□□ -0.66
DHFR-202ENST00000504396 ZNF532Q9HCE3 1301 aa10.93□□□□□ -0.66
DHFR-202ENST00000504396 TRIM43BA6NCK2 446 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 PGK1P00558 417 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 IGHA2P01877 340 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 CLTBP09497 229 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 CYP2D6P10635 497 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 RAG1P15918 1043 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 PDE6AP16499 860 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 CLCN1P35523 988 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 TLE2Q04725 743 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 RNF180Q86T96 592 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 AMOTL1Q8IY63 956 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 TRIM43Q96BQ3 446 aaPredicted RBP10.92□□□□□ -0.66
DHFR-202ENST00000504396 DYNLL2Q96FJ2 89 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 TTYH1Q9H313 450 aaPredicted RBP10.92□□□□□ -0.66
DHFR-202ENST00000504396 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.92□□□□□ -0.66
DHFR-202ENST00000504396 TACC3Q9Y6A5 838 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 COL11A1P12107 1806 aaPredicted RBP10.92□□□□□ -0.66
DHFR-202ENST00000504396 GOLIM4O00461 696 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 PGK2P07205 417 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 GABPAQ06546 454 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 KCTD2Q14681 263 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 SNX17Q15036 470 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 HSP90AB4PQ58FF6 505 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 KIAA1755Q5JYT7 1200 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 ABRAQ8N0Z2 381 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 LCORLQ8N3X6 602 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 REPIN1Q9BWE0 567 aaKnown RBP10.92□□□□□ -0.66
DHFR-202ENST00000504396 DCP1AQ9NPI6 582 aaPredicted RBP10.92□□□□□ -0.66
DHFR-202ENST00000504396 SWAP70Q9UH65 585 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 EYSQ5T1H1 3165 aa10.92□□□□□ -0.66
DHFR-202ENST00000504396 LAMA2P24043 3122 aaKnown RBP10.92□□□□□ -0.66
DHFR-202ENST00000504396 PLXNA1Q9UIW2 1896 aa10.91□□□□□ -0.66
DHFR-202ENST00000504396 A0A1W2PQ45 241 aaPredicted RBP10.91□□□□□ -0.66
DHFR-202ENST00000504396 A0A1W2PQY0 241 aa10.91□□□□□ -0.66
DHFR-202ENST00000504396 WDR46O15213 610 aaKnown RBP10.91□□□□□ -0.66
DHFR-202ENST00000504396 SLC25A27O95847 323 aa10.91□□□□□ -0.66
DHFR-202ENST00000504396 AKR1B1P15121 316 aa10.91□□□□□ -0.66
DHFR-202ENST00000504396 FPGSQ05932 587 aa10.91□□□□□ -0.66
DHFR-202ENST00000504396 TMEM132BQ14DG7 1078 aa10.91□□□□□ -0.66
DHFR-202ENST00000504396 LENG1Q96BZ8 264 aaPredicted RBP10.91□□□□□ -0.66
DHFR-202ENST00000504396 DDRGK1Q96HY6 314 aa10.91□□□□□ -0.66
DHFR-202ENST00000504396 TMUB1Q9BVT8 246 aa10.91□□□□□ -0.66
DHFR-202ENST00000504396 VCPKMTQ9H867 229 aa10.91□□□□□ -0.66
DHFR-202ENST00000504396 ARMT1Q9H993 441 aa10.91□□□□□ -0.66
DHFR-202ENST00000504396 TMEM39AQ9NV64 488 aa10.91□□□□□ -0.66
DHFR-202ENST00000504396 PHF24Q9UPV7 400 aa10.91□□□□□ -0.66
DHFR-202ENST00000504396 CNPY2Q9Y2B0 182 aa10.91□□□□□ -0.66
DHFR-202ENST00000504396 PARP14Q460N5 1801 aa10.9□□□□□ -0.66
DHFR-202ENST00000504396 ZNFX1Q9P2E3 1918 aaKnown RBP10.9□□□□□ -0.66
DHFR-202ENST00000504396 BAZ2AQ9UIF9 1905 aaKnown RBP10.9□□□□□ -0.66
DHFR-202ENST00000504396 MBD4O95243 580 aa10.9□□□□□ -0.66
DHFR-202ENST00000504396 CENPBP07199 599 aaPredicted RBP10.9□□□□□ -0.66
DHFR-202ENST00000504396 IFIT2P09913 472 aaKnown RBP10.9□□□□□ -0.66
DHFR-202ENST00000504396 AKR1A1P14550 325 aa10.9□□□□□ -0.66
DHFR-202ENST00000504396 ITGB8P26012 769 aa10.9□□□□□ -0.66
DHFR-202ENST00000504396 C1orf53Q5VUE5 145 aa10.9□□□□□ -0.66
DHFR-202ENST00000504396 CEP85Q6P2H3 762 aa10.9□□□□□ -0.66
DHFR-202ENST00000504396 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.9□□□□□ -0.66
DHFR-202ENST00000504396 SYMPKQ92797 1274 aaKnown RBP10.9□□□□□ -0.66
DHFR-202ENST00000504396 TINF2Q9BSI4 451 aa10.9□□□□□ -0.66
DHFR-202ENST00000504396 GOPCQ9HD26 462 aa10.9□□□□□ -0.66
DHFR-202ENST00000504396 STARD7Q9NQZ5 370 aa10.9□□□□□ -0.66
DHFR-202ENST00000504396 FAM217BQ9NTX9 383 aaPredicted RBP10.9□□□□□ -0.66
DHFR-202ENST00000504396 NRBP1Q9UHY1 535 aa10.9□□□□□ -0.66
DHFR-202ENST00000504396 CYP2D7A0A087X1C5 515 aa10.89□□□□□ -0.67
DHFR-202ENST00000504396 DCDC2CA8MYV0 355 aa10.89□□□□□ -0.67
DHFR-202ENST00000504396 TAL1P17542 331 aaPredicted RBP10.89□□□□□ -0.67
DHFR-202ENST00000504396 GGCXP38435 758 aa10.89□□□□□ -0.67
DHFR-202ENST00000504396 EPHB4P54760 987 aa10.89□□□□□ -0.67
DHFR-202ENST00000504396 CLASRPQ8N2M8 674 aaKnown RBP10.89□□□□□ -0.67
DHFR-202ENST00000504396 RHPN1Q8TCX5 695 aa10.89□□□□□ -0.67
DHFR-202ENST00000504396 PPM1EQ8WY54 764 aa10.89□□□□□ -0.67
DHFR-202ENST00000504396 VTI1AQ96AJ9 217 aa10.89□□□□□ -0.67
DHFR-202ENST00000504396 PRDM6Q9NQX0 595 aa10.89□□□□□ -0.67
DHFR-202ENST00000504396 FBXO28Q9NVF7 368 aa10.89□□□□□ -0.67
DHFR-202ENST00000504396 ZHX1Q9UKY1 873 aaPredicted RBP10.89□□□□□ -0.67
DHFR-202ENST00000504396 TMX2Q9Y320 296 aa10.89□□□□□ -0.67
DHFR-202ENST00000504396 CTDP1Q9Y5B0 961 aaPredicted RBP10.89□□□□□ -0.67
DHFR-202ENST00000504396 TMEM265A0A087WTH1 108 aa10.88□□□□□ -0.67
DHFR-202ENST00000504396 PRKAB2O43741 272 aa10.88□□□□□ -0.67
DHFR-202ENST00000504396 ADH1BP00325 375 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms