RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 TTBK2Q6IQ55 1244 aa16.53■□□□□ 0.24
PDLIM7-211ENST00000504318 FAM133AQ8N9E0 248 aa16.53■□□□□ 0.24
PDLIM7-211ENST00000504318 CHURC1Q8WUH1 139 aa16.53■□□□□ 0.24
PDLIM7-211ENST00000504318 DCAF4Q8WV16 495 aa16.53■□□□□ 0.24
PDLIM7-211ENST00000504318 CHMP4CQ96CF2 233 aa16.53■□□□□ 0.24
PDLIM7-211ENST00000504318 RANBP17Q9H2T7 1088 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-211ENST00000504318 A1CFQ9NQ94 594 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-211ENST00000504318 ADAMTS4O75173 837 aa16.52■□□□□ 0.24
PDLIM7-211ENST00000504318 PDHBP11177 359 aa16.52■□□□□ 0.24
PDLIM7-211ENST00000504318 BMP8BP34820 402 aa16.52■□□□□ 0.24
PDLIM7-211ENST00000504318 MFAP1P55081 439 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-211ENST00000504318 SNAP25P60880 206 aa16.52■□□□□ 0.24
PDLIM7-211ENST00000504318 RRP12Q5JTH9 1297 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-211ENST00000504318 LENG1Q96BZ8 264 aaPredicted RBP16.52■□□□□ 0.24
PDLIM7-211ENST00000504318 SENP6Q9GZR1 1112 aaPredicted RBP16.52■□□□□ 0.24
PDLIM7-211ENST00000504318 ZMYND8Q9ULU4 1186 aaPredicted RBP16.52■□□□□ 0.24
PDLIM7-211ENST00000504318 HIP1O00291 1037 aa16.51■□□□□ 0.23
PDLIM7-211ENST00000504318 SYN1P17600 705 aa16.51■□□□□ 0.23
PDLIM7-211ENST00000504318 CNTN2Q02246 1040 aa16.51■□□□□ 0.23
PDLIM7-211ENST00000504318 MUM1L1Q5H9M0 696 aa16.51■□□□□ 0.23
PDLIM7-211ENST00000504318 CCSAPQ6IQ19 270 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-211ENST00000504318 MFSD6Q6ZSS7 791 aa16.51■□□□□ 0.23
PDLIM7-211ENST00000504318 ANKS1AQ92625 1134 aa16.51■□□□□ 0.23
PDLIM7-211ENST00000504318 TTC14Q96N46 770 aa16.51■□□□□ 0.23
PDLIM7-211ENST00000504318 DIAPH3Q9NSV4 1193 aa16.51■□□□□ 0.23
PDLIM7-211ENST00000504318 FBXO40Q9UH90 709 aa16.51■□□□□ 0.23
PDLIM7-211ENST00000504318 GTF3C3Q9Y5Q9 886 aa16.51■□□□□ 0.23
PDLIM7-211ENST00000504318 A0A1W2PPC1 479 aa16.5■□□□□ 0.23
PDLIM7-211ENST00000504318 SOWAHBA6NEL2 793 aa16.5■□□□□ 0.23
PDLIM7-211ENST00000504318 ZNF543Q08ER8 600 aa16.5■□□□□ 0.23
PDLIM7-211ENST00000504318 C1orf53Q5VUE5 145 aa16.5■□□□□ 0.23
PDLIM7-211ENST00000504318 ACAD9Q9H845 621 aa16.5■□□□□ 0.23
PDLIM7-211ENST00000504318 HOMER2Q9NSB8 354 aa16.5■□□□□ 0.23
PDLIM7-211ENST00000504318 RNF146Q9NTX7 359 aa16.5■□□□□ 0.23
PDLIM7-211ENST00000504318 PHF24Q9UPV7 400 aa16.5■□□□□ 0.23
PDLIM7-211ENST00000504318 FRMPD2Q68DX3 1309 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 SOX1O00570 391 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 ZNF213O14771 459 aa16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 ICAM1P05362 532 aa16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 AKR1A1P14550 325 aa16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 CHMLP26374 656 aa16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 SLC16A2P36021 539 aa16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 MAGEA10P43363 369 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 NT5C2P49902 561 aa16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 TKFCQ3LXA3 575 aa16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 SLC39A5Q6ZMH5 540 aa16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 DGKHQ86XP1 1220 aa16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 ARRDC4Q8NCT1 418 aa16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 KLHDC9Q8NEP7 349 aa16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 DDX11Q96FC9 970 aa16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 RNF41Q9H4P4 317 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 TOMM22Q9NS69 142 aa16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-211ENST00000504318 RAD50Q92878 1312 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 CTAGE5O15320 804 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 PGK1P00558 417 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 RTP1P59025 263 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 NKX3-2P78367 333 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 IRX5P78411 483 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 SYDE2Q5VT97 1194 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 CCDC174Q6PII3 467 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 ARMCX2Q7L311 632 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 CCDC144CPQ8IYA2 1237 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 ANKRD35Q8N283 1001 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 MORC4Q8TE76 937 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 ESR2Q92731 530 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 TRERF1Q96PN7 1200 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 ZKSCAN3Q9BRR0 538 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 CYP39A1Q9NYL5 469 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 ZSWIM5Q9P217 1185 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 MTMR7Q9Y216 660 aa16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 DDX49Q9Y6V7 483 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-211ENST00000504318 SYNRGQ9UMZ2 1314 aa16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 MYADML2A6NDP7 307 aa16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 B4E1Z4 1266 aa16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 KDM4AO75164 1064 aa16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 RARBP10826 455 aa16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 ALAS1P13196 640 aa16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 SLC4A3P48751 1232 aa16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 ATN1P54259 1190 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 PTH1RQ03431 593 aa16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 ACVR2BQ13705 512 aa16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 CCDC96Q2M329 555 aa16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 ENAHQ8N8S7 591 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 CLEC4DQ8WXI8 215 aa16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 PURBQ96QR8 312 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 UPF3AQ9H1J1 476 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 XPNPEP3Q9NQH7 507 aa16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 TAF6LQ9Y6J9 622 aa16.47■□□□□ 0.23
PDLIM7-211ENST00000504318 CST5P28325 142 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-211ENST00000504318 ADCYAP1R1P41586 468 aa16.46■□□□□ 0.23
PDLIM7-211ENST00000504318 IKQ13123 557 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-211ENST00000504318 SEC23AQ15436 765 aa16.46■□□□□ 0.23
PDLIM7-211ENST00000504318 ABHD16BQ9H3Z7 469 aa16.46■□□□□ 0.23
PDLIM7-211ENST00000504318 GPCPD1Q9NPB8 672 aa16.46■□□□□ 0.23
PDLIM7-211ENST00000504318 CCPG1Q9ULG6 757 aa16.46■□□□□ 0.23
PDLIM7-211ENST00000504318 CNPY2Q9Y2B0 182 aa16.46■□□□□ 0.23
PDLIM7-211ENST00000504318 CTDP1Q9Y5B0 961 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-211ENST00000504318 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-211ENST00000504318 KBTBD13C9JR72 458 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms