RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 TMEM47Q9BQJ4 181 aa12.7□□□□□ -0.38
PAPD4-207ENST00000504233 PCDHA6Q9UN73 950 aa12.7□□□□□ -0.38
PAPD4-207ENST00000504233 PCDHA8Q9Y5H6 950 aa12.7□□□□□ -0.38
PAPD4-207ENST00000504233 MYH8P13535 1937 aa12.7□□□□□ -0.38
PAPD4-207ENST00000504233 TRAPPC10P48553 1259 aa12.7□□□□□ -0.38
PAPD4-207ENST00000504233 COPB1P53618 953 aaKnown RBP12.7□□□□□ -0.38
PAPD4-207ENST00000504233 MAP3K9P80192 1104 aa12.7□□□□□ -0.38
PAPD4-207ENST00000504233 SMC1AQ14683 1233 aaKnown RBP12.7□□□□□ -0.38
PAPD4-207ENST00000504233 ZNF569Q5MCW4 686 aa12.7□□□□□ -0.38
PAPD4-207ENST00000504233 USP17L2Q6R6M4 530 aa12.7□□□□□ -0.38
PAPD4-207ENST00000504233 LRRC15Q8TF66 581 aa12.7□□□□□ -0.38
PAPD4-207ENST00000504233 MKRN1Q9UHC7 482 aaKnown RBP12.7□□□□□ -0.38
PAPD4-207ENST00000504233 MRFAP1Q9Y605 127 aa12.7□□□□□ -0.38
PAPD4-207ENST00000504233 GOLGA6L9A6NEM1 432 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 ERVK-24P63145 666 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 NAALADL2Q58DX5 795 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 CTAGE1Q96RT6 745 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 EFCAB8A8MWE9 144 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 NPM3O75607 178 aaKnown RBP12.69□□□□□ -0.38
PAPD4-207ENST00000504233 UBA7P41226 1012 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 UBXN1Q04323 297 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 GRM4Q14833 912 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 LETM2Q2VYF4 491 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 TCP11X2Q5H9J9 407 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 ZNF658Q5TYW1 1059 aaPredicted RBP12.69□□□□□ -0.38
PAPD4-207ENST00000504233 DGKHQ86XP1 1220 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 SLF1Q9BQI6 1058 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 DISC1Q9NRI5 854 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 RRP15Q9Y3B9 282 aaKnown RBP12.69□□□□□ -0.38
PAPD4-207ENST00000504233 KLRF2D3W0D1 207 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 BTDP43251 543 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 AMOTL1Q8IY63 956 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 WDR66Q8TBY9 1149 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 UBA5Q9GZZ9 404 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 RWDD2AQ9UIY3 292 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 TFR2Q9UP52 801 aa12.69□□□□□ -0.38
PAPD4-207ENST00000504233 KIAA1551Q9HCM1 1747 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 DLEC1Q9Y238 1755 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 STXBP3O00186 592 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 UFL1O94874 794 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 TPM1P09493 284 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 RASA1P20936 1047 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 KRT9P35527 623 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 LONP1P36776 959 aaKnown RBP12.68□□□□□ -0.38
PAPD4-207ENST00000504233 NAPAP54920 295 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 FAM196AQ6ZSG2 479 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 CNBD1Q8NA66 436 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 IRS2Q9Y4H2 1338 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 KIF5CO60282 957 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 BAG3O95817 575 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 LAMB1P07942 1786 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 EIF6P56537 245 aaKnown RBP12.68□□□□□ -0.38
PAPD4-207ENST00000504233 FAM193AP78312 1265 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 GPSM2P81274 684 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 PACS2Q86VP3 889 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 GPIHBP1Q8IV16 184 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 CHP1Q99653 195 aa12.68□□□□□ -0.38
PAPD4-207ENST00000504233 ARGLU1Q9NWB6 273 aaPredicted RBP12.68□□□□□ -0.38
PAPD4-207ENST00000504233 CCDC88AQ3V6T2 1871 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 H3BQF6 201 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 CCNT1O60563 726 aaKnown RBP12.67□□□□□ -0.38
PAPD4-207ENST00000504233 PARP1P09874 1014 aaKnown RBP12.67□□□□□ -0.38
PAPD4-207ENST00000504233 GRAPQ13588 217 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 KIF4BQ2VIQ3 1234 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 TTC19Q6DKK2 380 aaPredicted RBP12.67□□□□□ -0.38
PAPD4-207ENST00000504233 CLEC10AQ8IUN9 316 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 CNGA4Q8IV77 575 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 SLC35F6Q8N357 371 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 GRAPLQ8TC17 118 aaPredicted RBP12.67□□□□□ -0.38
PAPD4-207ENST00000504233 HPS3Q969F9 1004 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 EYA3Q99504 573 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 ABHD10Q9NUJ1 306 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 TRIM10Q9UDY6 481 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 LIMA1Q9UHB6 759 aaKnown RBP12.67□□□□□ -0.38
PAPD4-207ENST00000504233 PDS5AQ29RF7 1337 aaKnown RBP12.67□□□□□ -0.38
PAPD4-207ENST00000504233 DNAJC21Q5F1R6 531 aaKnown RBP12.67□□□□□ -0.38
PAPD4-207ENST00000504233 JAKMIP3Q5VZ66 844 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 ARL6IP4Q66PJ3 421 aaKnown RBP12.67□□□□□ -0.38
PAPD4-207ENST00000504233 IRF2BP1Q8IU81 584 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 TEX11Q8IYF3 940 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 ANKRD20A12PQ8NF67 263 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 CCDC102AQ96A19 550 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 TRIM47Q96LD4 638 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 BARHL2Q9NY43 387 aa12.67□□□□□ -0.38
PAPD4-207ENST00000504233 TNRC6CQ9HCJ0 1690 aaKnown RBP12.67□□□□□ -0.38
PAPD4-207ENST00000504233 FRMPD2Q68DX3 1309 aaPredicted RBP12.66□□□□□ -0.38
PAPD4-207ENST00000504233 RHOXF2BP0C7M4 288 aa12.66□□□□□ -0.38
PAPD4-207ENST00000504233 PLCG1P19174 1290 aa12.66□□□□□ -0.38
PAPD4-207ENST00000504233 CCDC178Q5BJE1 867 aa12.66□□□□□ -0.38
PAPD4-207ENST00000504233 ZNF804AQ7Z570 1209 aa12.66□□□□□ -0.38
PAPD4-207ENST00000504233 RHOXF2Q9BQY4 288 aa12.66□□□□□ -0.38
PAPD4-207ENST00000504233 PARD6BQ9BYG5 372 aa12.66□□□□□ -0.38
PAPD4-207ENST00000504233 RMND1Q9NWS8 449 aa12.66□□□□□ -0.38
PAPD4-207ENST00000504233 F8W031 263 aaPredicted RBP12.66□□□□□ -0.38
PAPD4-207ENST00000504233 M0R2N6 131 aa12.66□□□□□ -0.38
PAPD4-207ENST00000504233 CDK8P49336 464 aa12.66□□□□□ -0.38
PAPD4-207ENST00000504233 TXNRD1Q16881 649 aa12.66□□□□□ -0.38
PAPD4-207ENST00000504233 TRAPPC3LQ5T215 181 aa12.66□□□□□ -0.38
PAPD4-207ENST00000504233 RC3H1Q5TC82 1133 aaKnown RBP12.66□□□□□ -0.38
PAPD4-207ENST00000504233 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms