RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 SLC1A4P43007 532 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 PPATQ06203 517 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 KLRC3Q07444 240 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 SCRN1Q12765 414 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 TROAPQ12815 778 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 TRAF1Q13077 416 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 TRIM29Q14134 588 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 GRM4Q14833 912 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 CCDC96Q2M329 555 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 SLFN13Q68D06 897 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 USP17L2Q6R6M4 530 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 ERO1BQ86YB8 467 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 CCDC144CPQ8IYA2 1237 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 LRRC47Q8N1G4 583 aaKnown RBP10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 NECAB1Q8N987 351 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 ZNF280CQ8ND82 737 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 ZKSCAN4Q969J2 545 aaPredicted RBP10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 SLC10A4Q96EP9 437 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 WDR18Q9BV38 432 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 GBA2Q9HCG7 927 aaPredicted RBP10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 TMOD4Q9NZQ9 345 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 SEC63Q9UGP8 760 aaKnown RBP10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 MTMR7Q9Y216 660 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 ZHX2Q9Y6X8 837 aa10.68□□□□□ -0.7
ARHGEF28-206ENST00000504003 PAPPA2Q9BXP8 1791 aa10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 TOMM70O94826 608 aa10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 CELF2O95319 508 aaKnown RBP10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 S1PR4O95977 384 aa10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 BMP3P12645 472 aa10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 IFNAR1P17181 557 aa10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 PTPRAP18433 802 aa10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 IKQ13123 557 aaPredicted RBP10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 HIC1Q14526 733 aa10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 SMYD5Q6GMV2 418 aa10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 CHURC1Q8WUH1 139 aa10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 GMCL1Q96IK5 515 aa10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 MYL10Q9BUA6 226 aa10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 KIAA1683Q9H0B3 1180 aa10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 VCPKMTQ9H867 229 aa10.67□□□□□ -0.7
ARHGEF28-206ENST00000504003 TRPM7Q96QT4 1865 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 STK36Q9NRP7 1315 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 KLRF2D3W0D1 207 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 H3BQV1 296 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 WDR46O15213 610 aaKnown RBP10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 DEXIO95424 95 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 LARGE1O95461 756 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 SLURP2P0DP57 97 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 PDHBP11177 359 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 RXRAP19793 462 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 GJB2P29033 226 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 GUCY1A2P33402 732 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 ADD1P35611 737 aaKnown RBP10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 NUCB2P80303 420 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 FSTL1Q12841 308 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 PABPC4Q13310 644 aaKnown RBP eCLIP10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 COL9A3Q14050 684 aaPredicted RBP10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 VGLL4Q14135 290 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 FAM160B2Q86V87 743 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 PXYLP1Q8TE99 480 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 RRP36Q96EU6 259 aaKnown RBP10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 RNF26Q9BY78 433 aaPredicted RBP10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 SENP2Q9HC62 589 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 NCOA5Q9HCD5 579 aaKnown RBP10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 PNMA2Q9UL42 364 aa10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 CTDP1Q9Y5B0 961 aaPredicted RBP10.66□□□□□ -0.7
ARHGEF28-206ENST00000504003 SSC5DA1L4H1 1573 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 PTPDC1A2A3K4 754 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 PALM3A6NDB9 673 aaPredicted RBP10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 TRAF5O00463 557 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 CXCL11O14625 94 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 FMNL1O95466 1100 aaPredicted RBP10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 SNHG28P0DPA3 235 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 FDX1P10109 184 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 BACE1P56817 501 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 ZNF543Q08ER8 600 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 SPP2Q13103 211 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 PPIL2Q13356 520 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 RRP1BQ14684 758 aaKnown RBP10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 PKDCCQ504Y2 493 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 SPRYD7Q5W111 196 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 LARP1BQ659C4 914 aaKnown RBP10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 ZNF787Q6DD87 383 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 TMTC3Q6ZXV5 915 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 FASTKD5Q7L8L6 764 aaKnown RBP10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 ZNF598Q86UK7 904 aaKnown RBP10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 RAB11FIP4Q86YS3 637 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 FAM177A1Q8N128 213 aaPredicted RBP10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 RGS22Q8NE09 1264 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 CCDC12Q8WUD4 166 aaPredicted RBP10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 SPZ1Q9BXG8 430 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 SLC26A6Q9BXS9 759 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 ELP3Q9H9T3 547 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 ORC3Q9UBD5 711 aaPredicted RBP10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 MAD2L2Q9UI95 211 aa10.65□□□□□ -0.7
ARHGEF28-206ENST00000504003 SPDYE5A6NIY4 337 aa10.64□□□□□ -0.71
ARHGEF28-206ENST00000504003 TRIM75PA6NK02 468 aa10.64□□□□□ -0.71
ARHGEF28-206ENST00000504003 UBE2Q2LH0YL09 131 aa10.64□□□□□ -0.71
ARHGEF28-206ENST00000504003 hCG_1984214I3L0E3 225 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms