RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 TTI2Q6NXR4 508 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 NOA1Q8NC60 698 aaKnown RBP16.8■□□□□ 0.28
SNF8-203ENST00000504000 RHOXF2Q9BQY4 288 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 VPS18Q9P253 973 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 MAGEC2Q9UBF1 373 aaPredicted RBP16.8■□□□□ 0.28
SNF8-203ENST00000504000 KIAA1551Q9HCM1 1747 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 LOC102724428A0A0B4J2F2 783 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 A0A1W2PQJ5 194 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 BICDL2A1A5D9 508 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 EIF3CLB5ME19 914 aaKnown RBP16.8■□□□□ 0.28
SNF8-203ENST00000504000 SIK1P57059 783 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 HERVK_113P62684 666 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 MECOMQ03112 1051 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 SLC10A5Q5PT55 438 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 LEKR1Q6ZMV7 388 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 FAM114A1Q8IWE2 563 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 RUBCNQ92622 972 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 EIF3CQ99613 913 aaKnown RBP16.8■□□□□ 0.28
SNF8-203ENST00000504000 TMEM51Q9NW97 253 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 GUCA1BQ9UMX6 200 aa16.8■□□□□ 0.28
SNF8-203ENST00000504000 MAST2Q6P0Q8 1798 aa16.79■□□□□ 0.28
SNF8-203ENST00000504000 HOXA7P31268 230 aaPredicted RBP16.79■□□□□ 0.28
SNF8-203ENST00000504000 UBA7P41226 1012 aa16.79■□□□□ 0.28
SNF8-203ENST00000504000 ZBED6P86452 979 aa16.79■□□□□ 0.28
SNF8-203ENST00000504000 PURBQ96QR8 312 aaKnown RBP16.79■□□□□ 0.28
SNF8-203ENST00000504000 KAT14Q9H8E8 782 aa16.79■□□□□ 0.28
SNF8-203ENST00000504000 TCP11L1Q9NUJ3 509 aa16.79■□□□□ 0.28
SNF8-203ENST00000504000 MKRN1Q9UHC7 482 aaKnown RBP16.79■□□□□ 0.28
SNF8-203ENST00000504000 COL4A1P02462 1669 aa16.79■□□□□ 0.28
SNF8-203ENST00000504000 CCDC194A0A1B0GVG4 234 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 TSPY2A6NKD2 308 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 NMT2O60551 498 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 CAPN2P17655 700 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 GRM4Q14833 912 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 CCDC122Q5T0U0 273 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 ZSCAN29Q8IWY8 852 aaPredicted RBP16.78■□□□□ 0.28
SNF8-203ENST00000504000 CCDC47Q96A33 483 aaKnown RBP16.78■□□□□ 0.28
SNF8-203ENST00000504000 EXOC1Q9NV70 894 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 ZNHIT6Q9NWK9 470 aaKnown RBP16.78■□□□□ 0.28
SNF8-203ENST00000504000 FAM205AQ6ZU69 1335 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 VEGFAP15692 232 aaPredicted RBP16.78■□□□□ 0.28
SNF8-203ENST00000504000 CCNE1P24864 410 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 ITIH3Q06033 890 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 ORC2Q13416 577 aaPredicted RBP16.78■□□□□ 0.28
SNF8-203ENST00000504000 FAM47AQ5JRC9 791 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 NCAPH2Q6IBW4 605 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 TRIM47Q96LD4 638 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 LZTS2Q9BRK4 669 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 TSGA10Q9BZW7 698 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 PCDHA6Q9UN73 950 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 PCDHA8Q9Y5H6 950 aa16.78■□□□□ 0.28
SNF8-203ENST00000504000 ROBO3Q96MS0 1386 aa16.77■□□□□ 0.28
SNF8-203ENST00000504000 TRIM49BA6NDI0 452 aa16.77■□□□□ 0.27
SNF8-203ENST00000504000 COBLO75128 1261 aa16.77■□□□□ 0.27
SNF8-203ENST00000504000 IPO7O95373 1038 aaKnown RBP16.77■□□□□ 0.27
SNF8-203ENST00000504000 HNRNPH3P31942 346 aaKnown RBP16.77■□□□□ 0.27
SNF8-203ENST00000504000 PMS1P54277 932 aaKnown RBP16.77■□□□□ 0.27
SNF8-203ENST00000504000 GYS2P54840 703 aa16.77■□□□□ 0.27
SNF8-203ENST00000504000 IQCEQ6IPM2 695 aa16.77■□□□□ 0.27
SNF8-203ENST00000504000 ERGIC2Q96RQ1 377 aa16.77■□□□□ 0.27
SNF8-203ENST00000504000 TUBGCP2Q9BSJ2 902 aa16.77■□□□□ 0.27
SNF8-203ENST00000504000 SUGCTQ9HAC7 445 aa16.77■□□□□ 0.27
SNF8-203ENST00000504000 FAN1Q9Y2M0 1017 aa16.77■□□□□ 0.27
SNF8-203ENST00000504000 THRAP3Q9Y2W1 955 aaKnown RBP16.77■□□□□ 0.27
SNF8-203ENST00000504000 MYH14Q7Z406 1995 aaKnown RBP16.76■□□□□ 0.27
SNF8-203ENST00000504000 LRRIQ3A6PVS8 624 aaPredicted RBP16.76■□□□□ 0.27
SNF8-203ENST00000504000 ADAMTS3O15072 1205 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 PRLRP16471 622 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 ITPK1Q13572 414 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 ZNF572Q7Z3I7 529 aaPredicted RBP16.76■□□□□ 0.27
SNF8-203ENST00000504000 FNBP4Q8N3X1 1017 aaPredicted RBP16.76■□□□□ 0.27
SNF8-203ENST00000504000 PNMA1Q8ND90 353 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 P2RX5Q93086 422 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 DUSP9Q99956 384 aaKnown RBP16.76■□□□□ 0.27
SNF8-203ENST00000504000 C7orf25Q9BPX7 421 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 ANKRD2Q9GZV1 360 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 BARHL2Q9NY43 387 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 FEZ2Q9UHY8 353 aaPredicted RBP16.76■□□□□ 0.27
SNF8-203ENST00000504000 MAPK8IP1Q9UQF2 711 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 ZNF831Q5JPB2 1677 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 ABCB11O95342 1321 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 TFRCP02786 760 aaKnown RBP16.76■□□□□ 0.27
SNF8-203ENST00000504000 ATP1A1P05023 1023 aaKnown RBP16.76■□□□□ 0.27
SNF8-203ENST00000504000 C12orf60Q5U649 245 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 SPTY2D1Q68D10 685 aaPredicted RBP16.76■□□□□ 0.27
SNF8-203ENST00000504000 CSGALNACT2Q8N6G5 542 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 JAKMIP2Q96AA8 810 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 MAD2L2Q9UI95 211 aa16.76■□□□□ 0.27
SNF8-203ENST00000504000 N4BP1O75113 896 aaKnown RBP16.75■□□□□ 0.27
SNF8-203ENST00000504000 TRIM21P19474 475 aaKnown RBP16.75■□□□□ 0.27
SNF8-203ENST00000504000 HIBADHP31937 336 aaKnown RBP16.75■□□□□ 0.27
SNF8-203ENST00000504000 ERFEQ4G0M1 354 aa16.75■□□□□ 0.27
SNF8-203ENST00000504000 KIAA1328Q86T90 577 aa16.75■□□□□ 0.27
SNF8-203ENST00000504000 COG1Q8WTW3 980 aa16.75■□□□□ 0.27
SNF8-203ENST00000504000 CCDC102AQ96A19 550 aa16.75■□□□□ 0.27
SNF8-203ENST00000504000 MMS19Q96T76 1030 aa16.75■□□□□ 0.27
SNF8-203ENST00000504000 TMEM60Q9H2L4 133 aa16.75■□□□□ 0.27
SNF8-203ENST00000504000 NHEJ1Q9H9Q4 299 aaPredicted RBP16.75■□□□□ 0.27
SNF8-203ENST00000504000 IL17RBQ9NRM6 502 aa16.75■□□□□ 0.27
SNF8-203ENST00000504000 TRIM10Q9UDY6 481 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms