RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 ANKRD39Q53RE8 183 aa6.58□□□□□ -1.36
SCLT1-206ENST00000503565 NBPF12Q5TAG4 269 aaPredicted RBP6.58□□□□□ -1.36
SCLT1-206ENST00000503565 CDC37L1Q7L3B6 337 aa6.58□□□□□ -1.36
SCLT1-206ENST00000503565 ADAT2Q7Z6V5 191 aaKnown RBP6.58□□□□□ -1.36
SCLT1-206ENST00000503565 KCT2Q8NC54 265 aa6.58□□□□□ -1.36
SCLT1-206ENST00000503565 BVESQ8NE79 360 aa6.58□□□□□ -1.36
SCLT1-206ENST00000503565 DNAJB8Q8NHS0 232 aa6.58□□□□□ -1.36
SCLT1-206ENST00000503565 DDX1Q92499 740 aaKnown RBP6.58□□□□□ -1.36
SCLT1-206ENST00000503565 VWCEQ96DN2 955 aa6.58□□□□□ -1.36
SCLT1-206ENST00000503565 HEXIM2Q96MH2 286 aaKnown RBP6.58□□□□□ -1.36
SCLT1-206ENST00000503565 MKRN2Q9H000 416 aaKnown RBP6.58□□□□□ -1.36
SCLT1-206ENST00000503565 SFMBT1Q9UHJ3 866 aa6.58□□□□□ -1.36
SCLT1-206ENST00000503565 ARID4BQ4LE39 1312 aaPredicted RBP6.57□□□□□ -1.36
SCLT1-206ENST00000503565 ALG1L2C9J202 215 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 CYP26A1O43174 497 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 DLX3O60479 287 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 MAP4K4O95819 1239 aaPredicted RBP6.57□□□□□ -1.36
SCLT1-206ENST00000503565 CD247P20963 164 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 ARMCX6Q7L4S7 300 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 BRAPQ7Z569 592 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 FGD2Q7Z6J4 655 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 WFDC3Q8IUB2 231 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 TRIM59Q8IWR1 403 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 C7orf61Q8IZ16 206 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 GSTCDQ8NEC7 633 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 METTL22Q9BUU2 404 aaPredicted RBP6.57□□□□□ -1.36
SCLT1-206ENST00000503565 FOXQ1Q9C009 403 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 GBP3Q9H0R5 595 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 SLC52A2Q9HAB3 445 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 SSU72Q9NP77 194 aaKnown RBP6.57□□□□□ -1.36
SCLT1-206ENST00000503565 WHRNQ9P202 907 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 GABBR1Q9UBS5 961 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 EMC9Q9Y3B6 208 aa6.57□□□□□ -1.36
SCLT1-206ENST00000503565 CCDC194A0A1B0GVG4 234 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 BLACEA4D250 179 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 ALDH1L1O75891 902 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 GRIK1P39086 918 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 AUHQ13825 339 aaKnown RBP6.56□□□□□ -1.36
SCLT1-206ENST00000503565 ZNF460Q14592 562 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 PCBP1Q15365 356 aaKnown RBP eCLIP6.56□□□□□ -1.36
SCLT1-206ENST00000503565 SF1Q15637 639 aaKnown RBP6.56□□□□□ -1.36
SCLT1-206ENST00000503565 DUSP27Q5VZP5 1158 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 LHFPL2Q6ZUX7 228 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 TOP6BLQ8N6T0 577 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 FAM181AQ8N9Y4 354 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 ADCY4Q8NFM4 1077 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 ATL2Q8NHH9 583 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 GIMAP7Q8NHV1 300 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 LEO1Q8WVC0 666 aaPredicted RBP6.56□□□□□ -1.36
SCLT1-206ENST00000503565 BTN2A2Q8WVV5 523 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 TSR2Q969E8 191 aaKnown RBP6.56□□□□□ -1.36
SCLT1-206ENST00000503565 LRRC4CQ9HCJ2 640 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 GP6Q9HCN6 339 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 NDOR1Q9UHB4 597 aa6.56□□□□□ -1.36
SCLT1-206ENST00000503565 TNPO3Q9Y5L0 923 aaKnown RBP6.56□□□□□ -1.36
SCLT1-206ENST00000503565 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.55□□□□□ -1.36
SCLT1-206ENST00000503565 KATNA1O75449 491 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 PPM1BO75688 479 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 EOMESO95936 686 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 PRNPP04156 253 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 POU3F2P20265 443 aaPredicted RBP6.55□□□□□ -1.36
SCLT1-206ENST00000503565 GUCY2FP51841 1108 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 ZNF445P59923 1031 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 CYP27A1Q02318 531 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 NTRK3Q16288 839 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 PKN3Q6P5Z2 889 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 ARHGEF39Q8N4T4 335 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 RIN3Q8TB24 985 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 BRF1Q92994 677 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 SCLYQ96I15 445 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 RCC1LQ96I51 464 aaKnown RBP6.55□□□□□ -1.36
SCLT1-206ENST00000503565 KREMEN1Q96MU8 473 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 MTFR1LQ9H019 292 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 PRDM10Q9NQV6 1147 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 CGGBP1Q9UFW8 167 aaPredicted RBP6.55□□□□□ -1.36
SCLT1-206ENST00000503565 PLAGL2Q9UPG8 496 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 CEP131Q9UPN4 1083 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 AKT3Q9Y243 479 aa6.55□□□□□ -1.36
SCLT1-206ENST00000503565 NOP56O00567 594 aaKnown RBP6.54□□□□□ -1.36
SCLT1-206ENST00000503565 LRIG2O94898 1065 aa6.54□□□□□ -1.36
SCLT1-206ENST00000503565 SLITRK5O94991 958 aa6.54□□□□□ -1.36
SCLT1-206ENST00000503565 TBX4P57082 545 aa6.54□□□□□ -1.36
SCLT1-206ENST00000503565 TTF1Q15361 905 aaPredicted RBP6.54□□□□□ -1.36
SCLT1-206ENST00000503565 SEPT7Q16181 437 aaKnown RBP6.54□□□□□ -1.36
SCLT1-206ENST00000503565 DDX46Q7L014 1031 aaKnown RBP6.54□□□□□ -1.36
SCLT1-206ENST00000503565 PLD6Q8N2A8 252 aaKnown RBP6.54□□□□□ -1.36
SCLT1-206ENST00000503565 PPM1KQ8N3J5 372 aa6.54□□□□□ -1.36
SCLT1-206ENST00000503565 ASPSCR1Q9BZE9 553 aa6.54□□□□□ -1.36
SCLT1-206ENST00000503565 CCDC39Q9UFE4 941 aa6.54□□□□□ -1.36
SCLT1-206ENST00000503565 OAS3Q9Y6K5 1087 aaKnown RBP6.54□□□□□ -1.36
SCLT1-206ENST00000503565 KCNH1O95259 989 aa6.53□□□□□ -1.36
SCLT1-206ENST00000503565 ITGA4P13612 1032 aa6.53□□□□□ -1.36
SCLT1-206ENST00000503565 OXCT1P55809 520 aa6.53□□□□□ -1.36
SCLT1-206ENST00000503565 GFRA1P56159 465 aa6.53□□□□□ -1.36
SCLT1-206ENST00000503565 GABREP78334 506 aa6.53□□□□□ -1.36
SCLT1-206ENST00000503565 CYP4F3Q08477 520 aa6.53□□□□□ -1.36
SCLT1-206ENST00000503565 STRN3Q13033 797 aa6.53□□□□□ -1.36
SCLT1-206ENST00000503565 NFE2Q16621 373 aaPredicted RBP6.53□□□□□ -1.36
SCLT1-206ENST00000503565 CYP27C1Q4G0S4 372 aa6.53□□□□□ -1.36
SCLT1-206ENST00000503565 WWC2Q6AWC2 1192 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms