RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 CCDC194A0A1B0GVG4 234 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 ECE2O60344 883 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 SARSP49591 514 aaKnown RBP13.13□□□□□ -0.31
USP46-204ENST00000503060 EZH2Q15910 746 aaKnown RBP13.13□□□□□ -0.31
USP46-204ENST00000503060 STRIP1Q5VSL9 837 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 GRAMD1CQ8IYS0 662 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 SMARCE1Q969G3 411 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 STK32BQ9NY57 414 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 USP17L5A8MUK1 530 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 BMP6P22004 513 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 MYL5Q02045 173 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 DACT2Q5SW24 774 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 C4orf32Q8N8J7 132 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 ATL2Q8NHH9 583 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 RRP36Q96EU6 259 aaKnown RBP13.12□□□□□ -0.31
USP46-204ENST00000503060 CCDC34Q96HJ3 373 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 ZDHHC15Q96MV8 337 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 CAMKK2Q96RR4 588 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 MRIQ9BWK5 157 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 PDCL3Q9H2J4 239 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 CREB3O43889 395 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 SH3BP5O60239 455 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 HLA-DOAP06340 250 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 SLFN14P0C7P3 912 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 SHMT1P34896 483 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 EN1Q05925 392 aaPredicted RBP13.12□□□□□ -0.31
USP46-204ENST00000503060 NFIAQ12857 509 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 LRMPQ12912 555 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 MORC3Q14149 939 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 TRIML1Q8N9V2 468 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 CCDC12Q8WUD4 166 aaPredicted RBP13.12□□□□□ -0.31
USP46-204ENST00000503060 DRC1Q96MC2 740 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 HSD3B7Q9H2F3 369 aa13.12□□□□□ -0.31
USP46-204ENST00000503060 GEMIN8Q9NWZ8 242 aaKnown RBP13.12□□□□□ -0.31
USP46-204ENST00000503060 PDHBP11177 359 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 HDLBPQ00341 1268 aaKnown RBP13.11□□□□□ -0.31
USP46-204ENST00000503060 IL17AQ16552 155 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 ARL6IP4Q66PJ3 421 aaKnown RBP13.11□□□□□ -0.31
USP46-204ENST00000503060 SH3RF1Q7Z6J0 888 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 CREBRFQ8IUR6 639 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 KIAA0825Q8IV33 1275 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 SPATA20Q8TB22 786 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 CACTINQ8WUQ7 758 aaKnown RBP13.11□□□□□ -0.31
USP46-204ENST00000503060 C7orf43Q8WVR3 580 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 XPO4Q9C0E2 1151 aaKnown RBP13.11□□□□□ -0.31
USP46-204ENST00000503060 ZMYND12Q9H0C1 365 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 IFNKQ9P0W0 207 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 C10orf71Q711Q0 1435 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 MYH8P13535 1937 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 SMC2O95347 1197 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 LMOD1P29536 600 aaPredicted RBP13.11□□□□□ -0.31
USP46-204ENST00000503060 NAPAP54920 295 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 HOMER1Q86YM7 354 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 SMAP1Q8IYB5 467 aaPredicted RBP13.11□□□□□ -0.31
USP46-204ENST00000503060 LRRC47Q8N1G4 583 aaKnown RBP13.11□□□□□ -0.31
USP46-204ENST00000503060 MLKLQ8NB16 471 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 PAGE5Q96GU1 130 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 PIGSQ96S52 555 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 EHD4Q9H223 541 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 RIOX1Q9H6W3 641 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 RGS17Q9UGC6 210 aaPredicted RBP13.11□□□□□ -0.31
USP46-204ENST00000503060 SEC63Q9UGP8 760 aaKnown RBP13.11□□□□□ -0.31
USP46-204ENST00000503060 FRMD4BQ9Y2L6 1034 aa13.11□□□□□ -0.31
USP46-204ENST00000503060 TTLL1O95922 423 aa13.1□□□□□ -0.31
USP46-204ENST00000503060 SNHG28P0DPA3 235 aa13.1□□□□□ -0.31
USP46-204ENST00000503060 FANCCQ00597 558 aa13.1□□□□□ -0.31
USP46-204ENST00000503060 ASPRV1Q53RT3 343 aa13.1□□□□□ -0.31
USP46-204ENST00000503060 POTEAQ6S8J7 498 aa13.1□□□□□ -0.31
USP46-204ENST00000503060 CLEC10AQ8IUN9 316 aa13.1□□□□□ -0.31
USP46-204ENST00000503060 VAT1LQ9HCJ6 419 aa13.1□□□□□ -0.31
USP46-204ENST00000503060 DACH1Q9UI36 760 aa13.1□□□□□ -0.31
USP46-204ENST00000503060 R3HCC1Q9Y3T6 440 aaKnown RBP13.1□□□□□ -0.31
USP46-204ENST00000503060 PCDHAC2Q9Y5I4 1007 aa13.1□□□□□ -0.31
USP46-204ENST00000503060 SCN9AQ15858 1988 aa13.1□□□□□ -0.31
USP46-204ENST00000503060 ZNF646O15015 1829 aaPredicted RBP13.1□□□□□ -0.31
USP46-204ENST00000503060 FRMPD2Q68DX3 1309 aaPredicted RBP13.1□□□□□ -0.31
USP46-204ENST00000503060 ZRANB2O95218 330 aaKnown RBP eCLIP13.1□□□□□ -0.31
USP46-204ENST00000503060 EIF6P56537 245 aaKnown RBP13.1□□□□□ -0.31
USP46-204ENST00000503060 INF2Q27J81 1249 aa13.1□□□□□ -0.31
USP46-204ENST00000503060 ZFPM1Q8IX07 1006 aa13.1□□□□□ -0.31
USP46-204ENST00000503060 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
USP46-204ENST00000503060 SMCO2A6NFE2 343 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 MYO1BO43795 1136 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 NEMFO60524 1076 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 LONP1P36776 959 aaKnown RBP13.09□□□□□ -0.31
USP46-204ENST00000503060 AFMP43652 599 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 E2F4Q16254 413 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 AOC3Q16853 763 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 KRT25Q7Z3Z0 450 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 FILIP1Q7Z7B0 1213 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 LRRC8AQ8IWT6 810 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 PYM1Q9BRP8 204 aaKnown RBP13.09□□□□□ -0.31
USP46-204ENST00000503060 ATP1A3P13637 1013 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 GNA11P29992 359 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 RBM5P52756 815 aaKnown RBP eCLIP13.09□□□□□ -0.31
USP46-204ENST00000503060 TERF1P54274 439 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 ARID5BQ14865 1188 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 ZKSCAN8Q15776 578 aaPredicted RBP13.09□□□□□ -0.31
USP46-204ENST00000503060 UTP14CQ5TAP6 766 aaKnown RBP13.09□□□□□ -0.31
USP46-204ENST00000503060 SOGA3Q5TF21 947 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms