RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ADCY7P51828 1080 aa25.06■■□□□ 1.6
PTPN13-205ENST00000502971 ZRSR1Q15695 479 aaKnown RBP25.06■■□□□ 1.6
PTPN13-205ENST00000502971 INF2Q27J81 1249 aa25.06■■□□□ 1.6
PTPN13-205ENST00000502971 LONRF3Q496Y0 759 aa25.06■■□□□ 1.6
PTPN13-205ENST00000502971 C9orf131Q5VYM1 1079 aa25.06■■□□□ 1.6
PTPN13-205ENST00000502971 REXO1Q8N1G1 1221 aaKnown RBP25.06■■□□□ 1.6
PTPN13-205ENST00000502971 COA7Q96BR5 231 aa25.06■■□□□ 1.6
PTPN13-205ENST00000502971 MICALL2Q8IY33 904 aa25.06■■□□□ 1.6
PTPN13-205ENST00000502971 C4orf32Q8N8J7 132 aa25.06■■□□□ 1.6
PTPN13-205ENST00000502971 TRIM44Q96DX7 344 aaPredicted RBP25.06■■□□□ 1.6
PTPN13-205ENST00000502971 ZBTB21Q9ULJ3 1066 aa25.06■■□□□ 1.6
PTPN13-205ENST00000502971 LAD1O00515 517 aa25.05■■□□□ 1.6
PTPN13-205ENST00000502971 KANK3Q6NY19 840 aa25.05■■□□□ 1.6
PTPN13-205ENST00000502971 RIC8AQ9NPQ8 531 aa25.05■■□□□ 1.6
PTPN13-205ENST00000502971 CNOT7Q9UIV1 285 aaKnown RBP25.05■■□□□ 1.6
PTPN13-205ENST00000502971 GJA3Q9Y6H8 435 aa25.05■■□□□ 1.6
PTPN13-205ENST00000502971 ZNF541Q9H0D2 1346 aa25.04■■□□□ 1.6
PTPN13-205ENST00000502971 POLR2DO15514 142 aaKnown RBP25.04■■□□□ 1.6
PTPN13-205ENST00000502971 ORC2Q13416 577 aaPredicted RBP25.04■■□□□ 1.6
PTPN13-205ENST00000502971 NAT10Q9H0A0 1025 aaKnown RBP25.04■■□□□ 1.6
PTPN13-205ENST00000502971 TUBE1Q9UJT0 475 aa25.04■■□□□ 1.6
PTPN13-205ENST00000502971 TMX2Q9Y320 296 aa25.04■■□□□ 1.6
PTPN13-205ENST00000502971 A0A1W2PRG0 241 aa25.03■■□□□ 1.6
PTPN13-205ENST00000502971 VWA3AA6NCI4 1184 aa25.03■■□□□ 1.6
PTPN13-205ENST00000502971 PPP1R11O60927 126 aaPredicted RBP25.03■■□□□ 1.6
PTPN13-205ENST00000502971 BMP3P12645 472 aa25.03■■□□□ 1.6
PTPN13-205ENST00000502971 RASA3Q14644 834 aa25.03■■□□□ 1.6
PTPN13-205ENST00000502971 ERCC4Q92889 916 aaPredicted RBP25.03■■□□□ 1.6
PTPN13-205ENST00000502971 CCDC34Q96HJ3 373 aa25.03■■□□□ 1.6
PTPN13-205ENST00000502971 GLT8D2Q9H1C3 349 aa25.03■■□□□ 1.6
PTPN13-205ENST00000502971 USP25Q9UHP3 1055 aa25.03■■□□□ 1.6
PTPN13-205ENST00000502971 LONP1P36776 959 aaKnown RBP25.03■■□□□ 1.6
PTPN13-205ENST00000502971 CAP2P40123 477 aa25.03■■□□□ 1.6
PTPN13-205ENST00000502971 BTNL9Q6UXG8 535 aa25.03■■□□□ 1.6
PTPN13-205ENST00000502971 LUZP1Q86V48 1076 aa25.03■■□□□ 1.6
PTPN13-205ENST00000502971 CDAN1Q8IWY9 1227 aa25.03■■□□□ 1.6
PTPN13-205ENST00000502971 CEP57L1Q8IYX8 460 aa25.03■■□□□ 1.6
PTPN13-205ENST00000502971 PYM1Q9BRP8 204 aaKnown RBP25.03■■□□□ 1.6
PTPN13-205ENST00000502971 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.02■■□□□ 1.6
PTPN13-205ENST00000502971 MRPL12P52815 198 aaKnown RBP25.02■■□□□ 1.6
PTPN13-205ENST00000502971 NLRP12P59046 1061 aa25.02■■□□□ 1.6
PTPN13-205ENST00000502971 QRICH1Q2TAL8 776 aa25.02■■□□□ 1.6
PTPN13-205ENST00000502971 C11orf57Q6ZUT1 292 aaPredicted RBP25.02■■□□□ 1.6
PTPN13-205ENST00000502971 USP49Q70CQ1 688 aa25.02■■□□□ 1.6
PTPN13-205ENST00000502971 MIGA2Q7L4E1 593 aa25.02■■□□□ 1.6
PTPN13-205ENST00000502971 NEK8Q86SG6 692 aa25.02■■□□□ 1.6
PTPN13-205ENST00000502971 SYMPKQ92797 1274 aaKnown RBP25.02■■□□□ 1.6
PTPN13-205ENST00000502971 GOPCQ9HD26 462 aa25.02■■□□□ 1.6
PTPN13-205ENST00000502971 BIN2Q9UBW5 565 aaPredicted RBP25.02■■□□□ 1.6
PTPN13-205ENST00000502971 EGFRP00533 1210 aa25.01■■□□□ 1.59
PTPN13-205ENST00000502971 PRPHP41219 470 aa25.01■■□□□ 1.59
PTPN13-205ENST00000502971 CDC37Q16543 378 aaPredicted RBP25.01■■□□□ 1.59
PTPN13-205ENST00000502971 CUL5Q93034 780 aa25.01■■□□□ 1.59
PTPN13-205ENST00000502971 EPSTI1Q96J88 318 aa25.01■■□□□ 1.59
PTPN13-205ENST00000502971 SERTAD1Q9UHV2 236 aa25.01■■□□□ 1.59
PTPN13-205ENST00000502971 MDM2Q00987 491 aaPredicted RBP25■■□□□ 1.59
PTPN13-205ENST00000502971 IQCB1Q15051 598 aa25■■□□□ 1.59
PTPN13-205ENST00000502971 SYDE2Q5VT97 1194 aa25■■□□□ 1.59
PTPN13-205ENST00000502971 JAKMIP3Q5VZ66 844 aa25■■□□□ 1.59
PTPN13-205ENST00000502971 DPY19L2Q6NUT2 758 aa25■■□□□ 1.59
PTPN13-205ENST00000502971 TEPSINQ96N21 525 aa25■■□□□ 1.59
PTPN13-205ENST00000502971 SH2D4AQ9H788 454 aa25■■□□□ 1.59
PTPN13-205ENST00000502971 ACTN4O43707 911 aaKnown RBP25■■□□□ 1.59
PTPN13-205ENST00000502971 CLK2P49760 499 aaKnown RBP25■■□□□ 1.59
PTPN13-205ENST00000502971 IL17AQ16552 155 aa25■■□□□ 1.59
PTPN13-205ENST00000502971 KIF4BQ2VIQ3 1234 aa25■■□□□ 1.59
PTPN13-205ENST00000502971 DTHD1Q6ZMT9 781 aa25■■□□□ 1.59
PTPN13-205ENST00000502971 SAMD7Q7Z3H4 446 aa25■■□□□ 1.59
PTPN13-205ENST00000502971 TBCKQ8TEA7 893 aa25■■□□□ 1.59
PTPN13-205ENST00000502971 BPIFA3Q9BQP9 254 aa25■■□□□ 1.59
PTPN13-205ENST00000502971 TMEM232C9JQI7 657 aa24.99■■□□□ 1.59
PTPN13-205ENST00000502971 ASNSP08243 561 aa24.99■■□□□ 1.59
PTPN13-205ENST00000502971 ECE1P42892 770 aa24.99■■□□□ 1.59
PTPN13-205ENST00000502971 PNOCQ13519 176 aa24.99■■□□□ 1.59
PTPN13-205ENST00000502971 TBC1D10BQ4KMP7 808 aaPredicted RBP24.99■■□□□ 1.59
PTPN13-205ENST00000502971 HS1BP3Q53T59 392 aa24.99■■□□□ 1.59
PTPN13-205ENST00000502971 NUP88Q99567 741 aaPredicted RBP24.99■■□□□ 1.59
PTPN13-205ENST00000502971 TMEM260Q9NX78 707 aa24.99■■□□□ 1.59
PTPN13-205ENST00000502971 DCAF8L1A6NGE4 600 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 H7C1D1 291 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 ADCY5O95622 1261 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 POSTNQ15063 836 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 LETM2Q2VYF4 491 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 PDILTQ8N807 584 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 ACER1Q8TDN7 264 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 PSTPIP2Q9H939 334 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 GINM1Q9NU53 330 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 HACL1Q9UJ83 578 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 GOLGA6L19H0YKK7 550 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 CCNT1O60563 726 aaKnown RBP24.98■■□□□ 1.59
PTPN13-205ENST00000502971 SLFN14P0C7P3 912 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 IKQ13123 557 aaPredicted RBP24.98■■□□□ 1.59
PTPN13-205ENST00000502971 AMNQ9BXJ7 453 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 TMEM60Q9H2L4 133 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 GPRC5DQ9NZD1 345 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 PCDHA1Q9Y5I3 950 aa24.98■■□□□ 1.59
PTPN13-205ENST00000502971 PHF20L1A8MW92 1017 aa24.97■■□□□ 1.59
PTPN13-205ENST00000502971 DHX58Q96C10 678 aa24.97■■□□□ 1.59
PTPN13-205ENST00000502971 NEMFO60524 1076 aa24.96■■□□□ 1.59
PTPN13-205ENST00000502971 TXLNAP40222 546 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms