RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 TMEM52Q8NDY8 209 aa6.49□□□□□ -1.37
PROM1-203ENST00000502943 FNIP1Q8TF40 1166 aa6.49□□□□□ -1.37
PROM1-203ENST00000502943 AP5S1Q9NUS5 200 aa6.49□□□□□ -1.37
PROM1-203ENST00000502943 GFOD1Q9NXC2 390 aa6.49□□□□□ -1.37
PROM1-203ENST00000502943 TNFRSF1AP19438 455 aa6.48□□□□□ -1.37
PROM1-203ENST00000502943 MLECQ14165 292 aa6.48□□□□□ -1.37
PROM1-203ENST00000502943 EAPPQ56P03 285 aaPredicted RBP6.48□□□□□ -1.37
PROM1-203ENST00000502943 OVOS1Q6IE37 1185 aa6.48□□□□□ -1.37
PROM1-203ENST00000502943 FAM161BQ96MY7 647 aa6.48□□□□□ -1.37
PROM1-203ENST00000502943 GMIPQ9P107 970 aa6.48□□□□□ -1.37
PROM1-203ENST00000502943 CNOT11Q9UKZ1 510 aaKnown RBP6.48□□□□□ -1.37
PROM1-203ENST00000502943 DUSP10Q9Y6W6 482 aa6.48□□□□□ -1.37
PROM1-203ENST00000502943 MINDY4BA8MYZ0 360 aa6.47□□□□□ -1.37
PROM1-203ENST00000502943 GARTP22102 1010 aa6.47□□□□□ -1.37
PROM1-203ENST00000502943 FBLN1P23142 703 aa6.47□□□□□ -1.37
PROM1-203ENST00000502943 BMP8BP34820 402 aa6.47□□□□□ -1.37
PROM1-203ENST00000502943 MAGEA10P43363 369 aaPredicted RBP6.47□□□□□ -1.37
PROM1-203ENST00000502943 DAB2P98082 770 aa6.47□□□□□ -1.37
PROM1-203ENST00000502943 ZXDAP98168 799 aa6.47□□□□□ -1.37
PROM1-203ENST00000502943 FOXO4P98177 505 aa6.47□□□□□ -1.37
PROM1-203ENST00000502943 MVKQ03426 396 aa6.47□□□□□ -1.37
PROM1-203ENST00000502943 NR1I3Q14994 352 aa6.47□□□□□ -1.37
PROM1-203ENST00000502943 CRTC3Q6UUV7 619 aa6.47□□□□□ -1.37
PROM1-203ENST00000502943 RELL1Q8IUW5 271 aa6.47□□□□□ -1.37
PROM1-203ENST00000502943 ZNF526Q8TF50 670 aaPredicted RBP6.47□□□□□ -1.37
PROM1-203ENST00000502943 EAF1Q96JC9 268 aaPredicted RBP6.47□□□□□ -1.37
PROM1-203ENST00000502943 PCDHB14Q9Y5E9 798 aa6.47□□□□□ -1.37
PROM1-203ENST00000502943 ABCC9O60706 1549 aa6.46□□□□□ -1.37
PROM1-203ENST00000502943 CLEC3AO75596 197 aa6.46□□□□□ -1.38
PROM1-203ENST00000502943 ATF2P15336 505 aa6.46□□□□□ -1.38
PROM1-203ENST00000502943 VAV1P15498 845 aa6.46□□□□□ -1.38
PROM1-203ENST00000502943 ENDOUP21128 410 aaKnown RBP6.46□□□□□ -1.38
PROM1-203ENST00000502943 ADAM17P78536 824 aa6.46□□□□□ -1.38
PROM1-203ENST00000502943 RAD51AP2Q09MP3 1159 aa6.46□□□□□ -1.38
PROM1-203ENST00000502943 FAM196AQ6ZSG2 479 aa6.46□□□□□ -1.38
PROM1-203ENST00000502943 DDX1Q92499 740 aaKnown RBP6.46□□□□□ -1.38
PROM1-203ENST00000502943 PMF1-BGLAPU3KQ54 211 aa6.46□□□□□ -1.38
PROM1-203ENST00000502943 SUV39H1O43463 412 aa6.45□□□□□ -1.38
PROM1-203ENST00000502943 DBHP09172 617 aa6.45□□□□□ -1.38
PROM1-203ENST00000502943 CNR2P34972 360 aa6.45□□□□□ -1.38
PROM1-203ENST00000502943 TARBP2Q15633 366 aaKnown RBP6.45□□□□□ -1.38
PROM1-203ENST00000502943 RTP2Q5QGT7 225 aa6.45□□□□□ -1.38
PROM1-203ENST00000502943 SAPCD2Q86UD0 394 aa6.45□□□□□ -1.38
PROM1-203ENST00000502943 RSRP1Q9BUV0 290 aa6.45□□□□□ -1.38
PROM1-203ENST00000502943 BRMS1Q9HCU9 246 aa6.45□□□□□ -1.38
PROM1-203ENST00000502943 ANKRD33BA6NCL7 494 aa6.44□□□□□ -1.38
PROM1-203ENST00000502943 MATN3O15232 486 aa6.44□□□□□ -1.38
PROM1-203ENST00000502943 HTRA3P83110 453 aa6.44□□□□□ -1.38
PROM1-203ENST00000502943 DLX2Q07687 328 aaPredicted RBP6.44□□□□□ -1.38
PROM1-203ENST00000502943 CDCP2Q5VXM1 449 aa6.44□□□□□ -1.38
PROM1-203ENST00000502943 MKRN2Q9H000 416 aaKnown RBP6.44□□□□□ -1.38
PROM1-203ENST00000502943 CNNM2Q9H8M5 875 aa6.44□□□□□ -1.38
PROM1-203ENST00000502943 SMPD4Q9NXE4 827 aa6.44□□□□□ -1.38
PROM1-203ENST00000502943 FBXL21Q9UKT6 434 aa6.44□□□□□ -1.38
PROM1-203ENST00000502943 A0A1W2PQ27 194 aa6.43□□□□□ -1.38
PROM1-203ENST00000502943 A0A1W2PQ64 194 aa6.43□□□□□ -1.38
PROM1-203ENST00000502943 A0A1W2PQC6 194 aa6.43□□□□□ -1.38
PROM1-203ENST00000502943 A0A1W2PQD8 194 aa6.43□□□□□ -1.38
PROM1-203ENST00000502943 SH3D21A4FU49 640 aa6.43□□□□□ -1.38
PROM1-203ENST00000502943 ATE1O95260 518 aa6.43□□□□□ -1.38
PROM1-203ENST00000502943 CYBBP04839 570 aa6.43□□□□□ -1.38
PROM1-203ENST00000502943 MC3RP41968 323 aa6.43□□□□□ -1.38
PROM1-203ENST00000502943 CWF19L2Q2TBE0 894 aaKnown RBP6.43□□□□□ -1.38
PROM1-203ENST00000502943 PAQR3Q6TCH7 311 aa6.43□□□□□ -1.38
PROM1-203ENST00000502943 TMEM192Q8IY95 271 aa6.43□□□□□ -1.38
PROM1-203ENST00000502943 ATG4CQ96DT6 458 aa6.43□□□□□ -1.38
PROM1-203ENST00000502943 CRELD1Q96HD1 420 aa6.43□□□□□ -1.38
PROM1-203ENST00000502943 FAN1Q9Y2M0 1017 aa6.43□□□□□ -1.38
PROM1-203ENST00000502943 PCDHB12Q9Y5F1 795 aa6.43□□□□□ -1.38
PROM1-203ENST00000502943 NOBOXO60393 691 aa6.42□□□□□ -1.38
PROM1-203ENST00000502943 ITGB3P05106 788 aa6.42□□□□□ -1.38
PROM1-203ENST00000502943 KCNA1Q09470 495 aa6.42□□□□□ -1.38
PROM1-203ENST00000502943 PWP1Q13610 501 aa6.42□□□□□ -1.38
PROM1-203ENST00000502943 BICRALQ6AI39 1079 aa6.42□□□□□ -1.38
PROM1-203ENST00000502943 NLRC3Q7RTR2 1065 aa6.42□□□□□ -1.38
PROM1-203ENST00000502943 AEBP1Q8IUX7 1158 aa6.42□□□□□ -1.38
PROM1-203ENST00000502943 NAT16Q8N8M0 369 aa6.42□□□□□ -1.38
PROM1-203ENST00000502943 SRGAP3O43295 1099 aa6.41□□□□□ -1.38
PROM1-203ENST00000502943 GSTM1P09488 218 aa6.41□□□□□ -1.38
PROM1-203ENST00000502943 PRR5P85299 388 aa6.41□□□□□ -1.38
PROM1-203ENST00000502943 XPCQ01831 940 aaPredicted RBP6.41□□□□□ -1.38
PROM1-203ENST00000502943 FBXL19Q6PCT2 694 aa6.41□□□□□ -1.38
PROM1-203ENST00000502943 TMC4Q7Z404 712 aa6.41□□□□□ -1.38
PROM1-203ENST00000502943 JAMLQ86YT9 394 aa6.41□□□□□ -1.38
PROM1-203ENST00000502943 SLC16A11Q8NCK7 471 aa6.41□□□□□ -1.38
PROM1-203ENST00000502943 SLC6A18Q96N87 628 aa6.41□□□□□ -1.38
PROM1-203ENST00000502943 LRRC3Q9BY71 257 aa6.41□□□□□ -1.38
PROM1-203ENST00000502943 KRTAP3-1Q9BYR8 98 aa6.41□□□□□ -1.38
PROM1-203ENST00000502943 LNPKQ9C0E8 428 aa6.41□□□□□ -1.38
PROM1-203ENST00000502943 KBTBD4Q9NVX7 518 aa6.41□□□□□ -1.38
PROM1-203ENST00000502943 F8W031 263 aaPredicted RBP6.4□□□□□ -1.38
PROM1-203ENST00000502943 SUPT5HO00267 1087 aaKnown RBP6.4□□□□□ -1.38
PROM1-203ENST00000502943 FSHBP01225 129 aa6.4□□□□□ -1.38
PROM1-203ENST00000502943 TACR1P25103 407 aa6.4□□□□□ -1.38
PROM1-203ENST00000502943 AUHQ13825 339 aaKnown RBP6.4□□□□□ -1.38
PROM1-203ENST00000502943 CARFQ8N187 725 aa6.4□□□□□ -1.38
PROM1-203ENST00000502943 RBM15Q96T37 977 aaKnown RBP eCLIP6.4□□□□□ -1.38
PROM1-203ENST00000502943 SLC12A9Q9BXP2 914 aa6.4□□□□□ -1.38
PROM1-203ENST00000502943 ANTXR1Q9H6X2 564 aa6.4□□□□□ -1.38
PROM1-203ENST00000502943 COPRSQ9NQ92 184 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms