RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 HIP1O00291 1037 aa12.65□□□□□ -0.38
CDK11A-222ENST00000498810 PEX10O60683 326 aa12.65□□□□□ -0.38
CDK11A-222ENST00000498810 INHAP05111 366 aa12.65□□□□□ -0.38
CDK11A-222ENST00000498810 CYP2B6P20813 491 aa12.65□□□□□ -0.38
CDK11A-222ENST00000498810 RASA1P20936 1047 aa12.65□□□□□ -0.38
CDK11A-222ENST00000498810 NMIQ13287 307 aaPredicted RBP12.65□□□□□ -0.38
CDK11A-222ENST00000498810 MCMDC2Q4G0Z9 681 aa12.65□□□□□ -0.38
CDK11A-222ENST00000498810 TXNRD2Q9NNW7 524 aa12.65□□□□□ -0.38
CDK11A-222ENST00000498810 TMX2Q9Y320 296 aa12.65□□□□□ -0.38
CDK11A-222ENST00000498810 CCDC171Q6TFL3 1326 aa12.64□□□□□ -0.39
CDK11A-222ENST00000498810 A0A0D9SFI3 127 aa12.64□□□□□ -0.39
CDK11A-222ENST00000498810 HMGCRP04035 888 aa12.64□□□□□ -0.39
CDK11A-222ENST00000498810 CCL5P13501 91 aa12.64□□□□□ -0.39
CDK11A-222ENST00000498810 ZKSCAN1P17029 563 aaPredicted RBP12.64□□□□□ -0.39
CDK11A-222ENST00000498810 EN2P19622 333 aaPredicted RBP12.64□□□□□ -0.39
CDK11A-222ENST00000498810 RGS2P41220 211 aa12.64□□□□□ -0.39
CDK11A-222ENST00000498810 IRF5Q13568 498 aa12.64□□□□□ -0.39
CDK11A-222ENST00000498810 COG2Q14746 738 aa12.64□□□□□ -0.39
CDK11A-222ENST00000498810 GPR142Q7Z601 462 aa12.64□□□□□ -0.39
CDK11A-222ENST00000498810 PLEKHH3Q7Z736 793 aa12.64□□□□□ -0.39
CDK11A-222ENST00000498810 PLEKHM2Q8IWE5 1019 aa12.64□□□□□ -0.39
CDK11A-222ENST00000498810 FAM227BQ96M60 508 aa12.64□□□□□ -0.39
CDK11A-222ENST00000498810 HOXC10Q9NYD6 342 aa12.64□□□□□ -0.39
CDK11A-222ENST00000498810 RLFQ13129 1914 aa12.64□□□□□ -0.39
CDK11A-222ENST00000498810 PLXNA1Q9UIW2 1896 aa12.63□□□□□ -0.39
CDK11A-222ENST00000498810 CENPFP49454 3210 aa12.63□□□□□ -0.39
CDK11A-222ENST00000498810 RANBP6O60518 1105 aaKnown RBP12.63□□□□□ -0.39
CDK11A-222ENST00000498810 S1PR4O95977 384 aa12.63□□□□□ -0.39
CDK11A-222ENST00000498810 CTDSPL2Q05D32 466 aa12.63□□□□□ -0.39
CDK11A-222ENST00000498810 IKQ13123 557 aaPredicted RBP12.63□□□□□ -0.39
CDK11A-222ENST00000498810 MTFR1Q15390 333 aa12.63□□□□□ -0.39
CDK11A-222ENST00000498810 RRP12Q5JTH9 1297 aaKnown RBP12.63□□□□□ -0.39
CDK11A-222ENST00000498810 FAM83BQ5T0W9 1011 aa12.63□□□□□ -0.39
CDK11A-222ENST00000498810 CWC27Q6UX04 472 aaKnown RBP12.63□□□□□ -0.39
CDK11A-222ENST00000498810 TICAM2Q86XR7 235 aa12.63□□□□□ -0.39
CDK11A-222ENST00000498810 MB21D1Q8N884 522 aa12.63□□□□□ -0.39
CDK11A-222ENST00000498810 ANKLE1Q8NAG6 615 aa12.63□□□□□ -0.39
CDK11A-222ENST00000498810 EMID1Q96A84 441 aaPredicted RBP12.63□□□□□ -0.39
CDK11A-222ENST00000498810 PORCNQ9H237 461 aa12.63□□□□□ -0.39
CDK11A-222ENST00000498810 RBPJLQ9UBG7 517 aa12.63□□□□□ -0.39
CDK11A-222ENST00000498810 CLIP2Q9UDT6 1046 aa12.63□□□□□ -0.39
CDK11A-222ENST00000498810 PDE4DIPQ5VU43 2346 aa12.63□□□□□ -0.39
CDK11A-222ENST00000498810 ZNF236Q9UL36 1845 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 ZNFX1Q9P2E3 1918 aaKnown RBP12.62□□□□□ -0.39
CDK11A-222ENST00000498810 PLIN4Q96Q06 1357 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 TTLL1O95922 423 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 CD46P15529 392 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 SDSP20132 328 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 TFAP4Q01664 338 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 FAM47AQ5JRC9 791 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 NCAPG2Q86XI2 1143 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 TRMT44Q8IYL2 757 aaKnown RBP12.62□□□□□ -0.39
CDK11A-222ENST00000498810 LRRC47Q8N1G4 583 aaKnown RBP12.62□□□□□ -0.39
CDK11A-222ENST00000498810 ATG4CQ96DT6 458 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 APBA2Q99767 749 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 UNC93B1Q9H1C4 597 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 OSBPL3Q9H4L5 887 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 NYAP2Q9P242 653 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 STX8Q9UNK0 236 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 FRMPD3Q5JV73 1810 aa12.62□□□□□ -0.39
CDK11A-222ENST00000498810 MDM2Q00987 491 aaPredicted RBP12.61□□□□□ -0.39
CDK11A-222ENST00000498810 Q3C1V9 767 aa12.61□□□□□ -0.39
CDK11A-222ENST00000498810 VPS53Q5VIR6 699 aa12.61□□□□□ -0.39
CDK11A-222ENST00000498810 LBX2Q6XYB7 198 aa12.61□□□□□ -0.39
CDK11A-222ENST00000498810 THAP11Q96EK4 314 aa12.61□□□□□ -0.39
CDK11A-222ENST00000498810 CEP95Q96GE4 821 aa12.61□□□□□ -0.39
CDK11A-222ENST00000498810 SPSB2Q99619 263 aa12.61□□□□□ -0.39
CDK11A-222ENST00000498810 SPATC1LQ9H0A9 340 aa12.61□□□□□ -0.39
CDK11A-222ENST00000498810 BTBD7Q9P203 1132 aa12.61□□□□□ -0.39
CDK11A-222ENST00000498810 MTMR7Q9Y216 660 aa12.61□□□□□ -0.39
CDK11A-222ENST00000498810 CNMDO75829 334 aa12.6□□□□□ -0.39
CDK11A-222ENST00000498810 TFRCP02786 760 aaKnown RBP12.6□□□□□ -0.39
CDK11A-222ENST00000498810 HSPD1P10809 573 aaKnown RBP12.6□□□□□ -0.39
CDK11A-222ENST00000498810 HAND2P61296 217 aa12.6□□□□□ -0.39
CDK11A-222ENST00000498810 LAPTM4AQ15012 233 aa12.6□□□□□ -0.39
CDK11A-222ENST00000498810 KIAA1755Q5JYT7 1200 aa12.6□□□□□ -0.39
CDK11A-222ENST00000498810 DPP9Q86TI2 863 aa12.6□□□□□ -0.39
CDK11A-222ENST00000498810 ZNF589Q86UQ0 364 aaPredicted RBP12.6□□□□□ -0.39
CDK11A-222ENST00000498810 DEFB118Q96PH6 123 aa12.6□□□□□ -0.39
CDK11A-222ENST00000498810 NUP88Q99567 741 aaPredicted RBP12.6□□□□□ -0.39
CDK11A-222ENST00000498810 SLF1Q9BQI6 1058 aa12.6□□□□□ -0.39
CDK11A-222ENST00000498810 SLC6A16Q9GZN6 736 aa12.6□□□□□ -0.39
CDK11A-222ENST00000498810 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDK11A-222ENST00000498810 HMX1Q9NP08 348 aaPredicted RBP12.6□□□□□ -0.39
CDK11A-222ENST00000498810 SLC5A4Q9NY91 659 aa12.6□□□□□ -0.39
CDK11A-222ENST00000498810 SLC27A5Q9Y2P5 690 aa12.6□□□□□ -0.39
CDK11A-222ENST00000498810 SLC15A5A6NIM6 579 aa12.59□□□□□ -0.39
CDK11A-222ENST00000498810 F5H6K3 240 aa12.59□□□□□ -0.39
CDK11A-222ENST00000498810 NDUFB10O96000 172 aa12.59□□□□□ -0.39
CDK11A-222ENST00000498810 NEFLP07196 543 aa12.59□□□□□ -0.39
CDK11A-222ENST00000498810 GJB1P08034 283 aa12.59□□□□□ -0.39
CDK11A-222ENST00000498810 ERCC3P19447 782 aa12.59□□□□□ -0.39
CDK11A-222ENST00000498810 KLRC3Q07444 240 aa12.59□□□□□ -0.39
CDK11A-222ENST00000498810 CCDC96Q2M329 555 aa12.59□□□□□ -0.39
CDK11A-222ENST00000498810 TTC22Q5TAA0 569 aa12.59□□□□□ -0.39
CDK11A-222ENST00000498810 MFSD14CQ5VZR4 134 aa12.59□□□□□ -0.39
CDK11A-222ENST00000498810 MFSD6Q6ZSS7 791 aa12.59□□□□□ -0.39
CDK11A-222ENST00000498810 NEDD1Q8NHV4 660 aa12.59□□□□□ -0.39
CDK11A-222ENST00000498810 U2AF1L4Q8WU68 220 aaKnown RBP12.59□□□□□ -0.39
CDK11A-222ENST00000498810 TRIB2Q92519 343 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms