RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-210ENST00000498756 PRPF38AQ8NAV1 312 aaKnown RBP12.54□□□□□ -0.4
GPATCH4-210ENST00000498756 CHURC1Q8WUH1 139 aa12.54□□□□□ -0.4
GPATCH4-210ENST00000498756 SPZ1Q9BXG8 430 aa12.54□□□□□ -0.4
GPATCH4-210ENST00000498756 SLC26A6Q9BXS9 759 aa12.54□□□□□ -0.4
GPATCH4-210ENST00000498756 VWA5AO00534 786 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 CPLX1O14810 134 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 PRPF3O43395 683 aaKnown RBP12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 DHX16O60231 1041 aaKnown RBP12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 FMNL1O95466 1100 aaPredicted RBP12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 ALDH1A1P00352 501 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 SMARCA1P28370 1054 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 HERVK_113P62684 666 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 TMEM132BQ14DG7 1078 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 PPP2R5BQ15173 497 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 OTUD7BQ6GQQ9 843 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 TYW1BQ6NUM6 668 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 CCDC174Q6PII3 467 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 COA7Q96BR5 231 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 ABHD8Q96I13 439 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 AGBL1Q96MI9 1066 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 LZTS2Q9BRK4 669 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 RANBP17Q9H2T7 1088 aaKnown RBP12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 SLC38A10Q9HBR0 1119 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 RAVER2Q9HCJ3 691 aaKnown RBP12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 RIPK3Q9Y572 518 aa12.53□□□□□ -0.4
GPATCH4-210ENST00000498756 CCDC196A0A1B0GTZ2 297 aa12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 OSBPP22059 807 aa12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 FOSBP53539 338 aa12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 IRX3P78415 501 aaPredicted RBP12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 CDC37Q16543 378 aaPredicted RBP12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 LBX2Q6XYB7 198 aa12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 CPXCR1Q8N123 301 aa12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 ZNF296Q8WUU4 475 aaPredicted RBP12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 GPKOWQ92917 476 aaPredicted RBP eCLIP12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 LLPHQ9BRT6 129 aaKnown RBP12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 MCOLN1Q9GZU1 580 aa12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 HOXC10Q9NYD6 342 aa12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 ORC3Q9UBD5 711 aaPredicted RBP12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 SLC45A1Q9Y2W3 748 aa12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 ADGRA2Q96PE1 1338 aa12.52□□□□□ -0.41
GPATCH4-210ENST00000498756 SMCHD1A6NHR9 2005 aa12.51□□□□□ -0.41
GPATCH4-210ENST00000498756 PNMA6FA0A0J9YX94 578 aa12.51□□□□□ -0.41
GPATCH4-210ENST00000498756 GPR25O00155 361 aa12.51□□□□□ -0.41
GPATCH4-210ENST00000498756 ZBTB5O15062 677 aa12.51□□□□□ -0.41
GPATCH4-210ENST00000498756 GJB2P29033 226 aa12.51□□□□□ -0.41
GPATCH4-210ENST00000498756 WWC2Q6AWC2 1192 aa12.51□□□□□ -0.41
GPATCH4-210ENST00000498756 TBC1D5Q92609 795 aa12.51□□□□□ -0.41
GPATCH4-210ENST00000498756 RRP36Q96EU6 259 aaKnown RBP12.51□□□□□ -0.41
GPATCH4-210ENST00000498756 PAGR1Q9BTK6 254 aa12.51□□□□□ -0.41
GPATCH4-210ENST00000498756 RNF26Q9BY78 433 aaPredicted RBP12.51□□□□□ -0.41
GPATCH4-210ENST00000498756 CPA4Q9UI42 421 aa12.51□□□□□ -0.41
GPATCH4-210ENST00000498756 ZNF214Q9UL59 606 aaPredicted RBP12.51□□□□□ -0.41
GPATCH4-210ENST00000498756 PARP14Q460N5 1801 aa12.51□□□□□ -0.41
GPATCH4-210ENST00000498756 CCDC85CA6NKD9 419 aa12.5□□□□□ -0.41
GPATCH4-210ENST00000498756 OPLAHO14841 1288 aa12.5□□□□□ -0.41
GPATCH4-210ENST00000498756 ZBED4O75132 1171 aa12.5□□□□□ -0.41
GPATCH4-210ENST00000498756 ANP32AP39687 249 aaKnown RBP12.5□□□□□ -0.41
GPATCH4-210ENST00000498756 PABPC4Q13310 644 aaKnown RBP eCLIP12.5□□□□□ -0.41
GPATCH4-210ENST00000498756 CRHR2Q13324 411 aa12.5□□□□□ -0.41
GPATCH4-210ENST00000498756 TAF1CQ15572 869 aaPredicted RBP12.5□□□□□ -0.41
GPATCH4-210ENST00000498756 PFKFB3Q16875 520 aaPredicted RBP12.5□□□□□ -0.41
GPATCH4-210ENST00000498756 ANKRD13CQ8N6S4 541 aa12.5□□□□□ -0.41
GPATCH4-210ENST00000498756 INTS4Q96HW7 963 aaKnown RBP12.5□□□□□ -0.41
GPATCH4-210ENST00000498756 MYPNQ86TC9 1320 aa12.5□□□□□ -0.41
GPATCH4-210ENST00000498756 STK36Q9NRP7 1315 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 STXBP3O00186 592 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 FKTNO75072 461 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 ICAM1P05362 532 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 SCG2P13521 617 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 CAP1Q01518 475 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 BECN1Q14457 450 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 USH1GQ495M9 461 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 MUM1L1Q5H9M0 696 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 CPLX2Q6PUV4 134 aaKnown RBP12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 C17orf99Q6UX52 265 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 CTU1Q7Z7A3 348 aaKnown RBP12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 FBXO11Q86XK2 927 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 ALG1Q9BT22 464 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 CFHR5Q9BXR6 569 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 MOV10L1Q9BXT6 1211 aaKnown RBP12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 VPS54Q9P1Q0 977 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 KCNJ14Q9UNX9 436 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 SMC3Q9UQE7 1217 aa12.49□□□□□ -0.41
GPATCH4-210ENST00000498756 ATP2A1O14983 1001 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 CDKL5O76039 1030 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 DEXIO95424 95 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 BCRP11274 1271 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 STAT3P40763 770 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 GUCY1B3Q02153 619 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 PLS1Q14651 629 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 NPY5RQ15761 445 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 NOM1Q5C9Z4 860 aaKnown RBP12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 HEATR3Q7Z4Q2 680 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 CLEC4DQ8WXI8 215 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 PARK7Q99497 189 aaKnown RBP12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 SPATC1LQ9H0A9 340 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 PORCNQ9H237 461 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 ZCCHC17Q9NP64 241 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms