RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 ZBED9Q6R2W3 1325 aa16.7■□□□□ 0.26
CCDC58-207ENST00000498466 BAZ2AQ9UIF9 1905 aaKnown RBP16.7■□□□□ 0.26
CCDC58-207ENST00000498466 NDUFB10O96000 172 aa16.7■□□□□ 0.26
CCDC58-207ENST00000498466 ATP5JP18859 108 aa16.7■□□□□ 0.26
CCDC58-207ENST00000498466 CYP2C18P33260 490 aa16.7■□□□□ 0.26
CCDC58-207ENST00000498466 MRPS5P82675 430 aaKnown RBP16.7■□□□□ 0.26
CCDC58-207ENST00000498466 ADAMTS19Q8TE59 1207 aa16.7■□□□□ 0.26
CCDC58-207ENST00000498466 KIFC2Q96AC6 838 aa16.7■□□□□ 0.26
CCDC58-207ENST00000498466 HAUS7Q99871 368 aa16.7■□□□□ 0.26
CCDC58-207ENST00000498466 UPF3AQ9H1J1 476 aaKnown RBP16.7■□□□□ 0.26
CCDC58-207ENST00000498466 MTIF3Q9H2K0 278 aaKnown RBP16.7■□□□□ 0.26
CCDC58-207ENST00000498466 MKNK2Q9HBH9 465 aa16.7■□□□□ 0.26
CCDC58-207ENST00000498466 RAVER2Q9HCJ3 691 aaKnown RBP16.7■□□□□ 0.26
CCDC58-207ENST00000498466 RAPGEFL1Q9UHV5 662 aa16.7■□□□□ 0.26
CCDC58-207ENST00000498466 ATP2A1O14983 1001 aa16.69■□□□□ 0.26
CCDC58-207ENST00000498466 HMMRO75330 724 aa16.69■□□□□ 0.26
CCDC58-207ENST00000498466 ADGRE1Q14246 886 aa16.69■□□□□ 0.26
CCDC58-207ENST00000498466 ZSCAN25Q6NSZ9 544 aa16.69■□□□□ 0.26
CCDC58-207ENST00000498466 ARMCX2Q7L311 632 aa16.69■□□□□ 0.26
CCDC58-207ENST00000498466 UHRF1Q96T88 793 aaPredicted RBP16.69■□□□□ 0.26
CCDC58-207ENST00000498466 PUS7LQ9H0K6 701 aaKnown RBP16.69■□□□□ 0.26
CCDC58-207ENST00000498466 IL23AQ9NPF7 189 aa16.69■□□□□ 0.26
CCDC58-207ENST00000498466 NYAP2Q9P242 653 aa16.69■□□□□ 0.26
CCDC58-207ENST00000498466 FBXO40Q9UH90 709 aa16.69■□□□□ 0.26
CCDC58-207ENST00000498466 RAB11FIP3O75154 756 aa16.68■□□□□ 0.26
CCDC58-207ENST00000498466 RASA1P20936 1047 aa16.68■□□□□ 0.26
CCDC58-207ENST00000498466 NOL8Q76FK4 1167 aaKnown RBP16.68■□□□□ 0.26
CCDC58-207ENST00000498466 RPAP2Q8IXW5 612 aaPredicted RBP16.68■□□□□ 0.26
CCDC58-207ENST00000498466 CCDC144CPQ8IYA2 1237 aa16.68■□□□□ 0.26
CCDC58-207ENST00000498466 HERVK_113Q902F9 699 aa16.68■□□□□ 0.26
CCDC58-207ENST00000498466 FGD4Q96M96 766 aa16.68■□□□□ 0.26
CCDC58-207ENST00000498466 NKX2-4Q9H2Z4 354 aa16.68■□□□□ 0.26
CCDC58-207ENST00000498466 SLC28A3Q9HAS3 691 aa16.68■□□□□ 0.26
CCDC58-207ENST00000498466 SLC38A10Q9HBR0 1119 aa16.68■□□□□ 0.26
CCDC58-207ENST00000498466 CXXC1Q9P0U4 656 aaPredicted RBP16.68■□□□□ 0.26
CCDC58-207ENST00000498466 CLIP2Q9UDT6 1046 aa16.68■□□□□ 0.26
CCDC58-207ENST00000498466 CHD7Q9P2D1 2997 aa16.68■□□□□ 0.26
CCDC58-207ENST00000498466 MINDY4BA8MYZ0 360 aa16.67■□□□□ 0.26
CCDC58-207ENST00000498466 CD4P01730 458 aa16.67■□□□□ 0.26
CCDC58-207ENST00000498466 FGBP02675 491 aa16.67■□□□□ 0.26
CCDC58-207ENST00000498466 BEX3Q00994 111 aa16.67■□□□□ 0.26
CCDC58-207ENST00000498466 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCDC58-207ENST00000498466 CHST13Q8NET6 341 aa16.67■□□□□ 0.26
CCDC58-207ENST00000498466 HIPK3Q9H422 1215 aa16.67■□□□□ 0.26
CCDC58-207ENST00000498466 HOMER2Q9NSB8 354 aa16.67■□□□□ 0.26
CCDC58-207ENST00000498466 CTAGE5O15320 804 aa16.66■□□□□ 0.26
CCDC58-207ENST00000498466 TNFAIP2Q03169 654 aa16.66■□□□□ 0.26
CCDC58-207ENST00000498466 SBK1Q52WX2 424 aa16.66■□□□□ 0.26
CCDC58-207ENST00000498466 CXCL17Q6UXB2 119 aa16.66■□□□□ 0.26
CCDC58-207ENST00000498466 OTOP2Q7RTS6 562 aa16.66■□□□□ 0.26
CCDC58-207ENST00000498466 FEM1BQ9UK73 627 aa16.66■□□□□ 0.26
CCDC58-207ENST00000498466 YBX2Q9Y2T7 364 aaKnown RBP16.66■□□□□ 0.26
CCDC58-207ENST00000498466 REV3LO60673 3130 aa16.65■□□□□ 0.26
CCDC58-207ENST00000498466 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.65■□□□□ 0.26
CCDC58-207ENST00000498466 OAZ1P54368 228 aa16.65■□□□□ 0.26
CCDC58-207ENST00000498466 CCL23P55773 120 aa16.65■□□□□ 0.26
CCDC58-207ENST00000498466 CNTN2Q02246 1040 aa16.65■□□□□ 0.26
CCDC58-207ENST00000498466 SIRT2Q8IXJ6 389 aa16.65■□□□□ 0.26
CCDC58-207ENST00000498466 MICALL1Q8N3F8 863 aa16.65■□□□□ 0.26
CCDC58-207ENST00000498466 STRBPQ96SI9 672 aaKnown RBP16.65■□□□□ 0.26
CCDC58-207ENST00000498466 KATNBL1Q9H079 304 aa16.65■□□□□ 0.26
CCDC58-207ENST00000498466 TSPYL2Q9H2G4 693 aaPredicted RBP16.65■□□□□ 0.26
CCDC58-207ENST00000498466 ISY1Q9ULR0 285 aaKnown RBP16.65■□□□□ 0.26
CCDC58-207ENST00000498466 UMODL1Q5DID0 1318 aa16.65■□□□□ 0.26
CCDC58-207ENST00000498466 CABYRO75952 493 aa16.64■□□□□ 0.25
CCDC58-207ENST00000498466 NKX3-2P78367 333 aa16.64■□□□□ 0.25
CCDC58-207ENST00000498466 HNRNPUQ00839 825 aaKnown RBP eCLIP16.64■□□□□ 0.25
CCDC58-207ENST00000498466 ITGA7Q13683 1181 aa16.64■□□□□ 0.25
CCDC58-207ENST00000498466 TLK2Q86UE8 772 aa16.64■□□□□ 0.25
CCDC58-207ENST00000498466 ZNF444Q8N0Y2 327 aaPredicted RBP16.64■□□□□ 0.25
CCDC58-207ENST00000498466 LRRC47Q8N1G4 583 aaKnown RBP16.64■□□□□ 0.25
CCDC58-207ENST00000498466 SLC43A3Q8NBI5 491 aa16.64■□□□□ 0.25
CCDC58-207ENST00000498466 ACAD9Q9H845 621 aa16.64■□□□□ 0.25
CCDC58-207ENST00000498466 GREB1LQ9C091 1923 aaPredicted RBP16.63■□□□□ 0.25
CCDC58-207ENST00000498466 IGKV6D-41A0A0C4DH26 115 aa16.63■□□□□ 0.25
CCDC58-207ENST00000498466 GSG1L2A8MUP6 293 aa16.63■□□□□ 0.25
CCDC58-207ENST00000498466 MS4A1P11836 297 aa16.63■□□□□ 0.25
CCDC58-207ENST00000498466 RABGGTBP53611 331 aa16.63■□□□□ 0.25
CCDC58-207ENST00000498466 FSCN1Q16658 493 aaKnown RBP16.63■□□□□ 0.25
CCDC58-207ENST00000498466 PPP2R2DQ66LE6 453 aa16.63■□□□□ 0.25
CCDC58-207ENST00000498466 GIMAP6Q6P9H5 292 aa16.63■□□□□ 0.25
CCDC58-207ENST00000498466 MKL1Q969V6 931 aa16.63■□□□□ 0.25
CCDC58-207ENST00000498466 CEP95Q96GE4 821 aa16.63■□□□□ 0.25
CCDC58-207ENST00000498466 AP5M1Q9H0R1 490 aa16.63■□□□□ 0.25
CCDC58-207ENST00000498466 ZNF287Q9HBT7 754 aa16.63■□□□□ 0.25
CCDC58-207ENST00000498466 SLC4A7Q9Y6M7 1214 aa16.63■□□□□ 0.25
CCDC58-207ENST00000498466 ASTN1O14525 1302 aa16.63■□□□□ 0.25
CCDC58-207ENST00000498466 ASB14A6NK59 587 aa16.62■□□□□ 0.25
CCDC58-207ENST00000498466 ZBBXA8MT70 800 aa16.62■□□□□ 0.25
CCDC58-207ENST00000498466 DYNC1LI2O43237 492 aaPredicted RBP16.62■□□□□ 0.25
CCDC58-207ENST00000498466 ZEB2O60315 1214 aa16.62■□□□□ 0.25
CCDC58-207ENST00000498466 PRDM1O75626 825 aa16.62■□□□□ 0.25
CCDC58-207ENST00000498466 TTLL1O95922 423 aa16.62■□□□□ 0.25
CCDC58-207ENST00000498466 BMP3P12645 472 aa16.62■□□□□ 0.25
CCDC58-207ENST00000498466 SLFN13Q68D06 897 aa16.62■□□□□ 0.25
CCDC58-207ENST00000498466 RPUSD2Q8IZ73 545 aaKnown RBP16.62■□□□□ 0.25
CCDC58-207ENST00000498466 FAM133AQ8N9E0 248 aa16.62■□□□□ 0.25
CCDC58-207ENST00000498466 GMCL1P1Q8NEA9 526 aa16.62■□□□□ 0.25
CCDC58-207ENST00000498466 NOC4LQ9BVI4 516 aaKnown RBP16.62■□□□□ 0.25
CCDC58-207ENST00000498466 TRPV6Q9H1D0 765 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms