RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 CD2BP2O95400 341 aaKnown RBP13.27□□□□□ -0.29
CTTN-208ENST00000498223 FDX1P10109 184 aa13.27□□□□□ -0.29
CTTN-208ENST00000498223 SSRP1Q08945 709 aaKnown RBP13.27□□□□□ -0.29
CTTN-208ENST00000498223 SCRN1Q12765 414 aa13.27□□□□□ -0.29
CTTN-208ENST00000498223 BTNL9Q6UXG8 535 aa13.27□□□□□ -0.29
CTTN-208ENST00000498223 SRBD1Q8N5C6 995 aaKnown RBP13.27□□□□□ -0.29
CTTN-208ENST00000498223 ANKRD13CQ8N6S4 541 aa13.27□□□□□ -0.29
CTTN-208ENST00000498223 MB21D1Q8N884 522 aa13.27□□□□□ -0.29
CTTN-208ENST00000498223 CWC22Q9HCG8 908 aaKnown RBP13.27□□□□□ -0.29
CTTN-208ENST00000498223 PLXNB2O15031 1838 aa13.27□□□□□ -0.29
CTTN-208ENST00000498223 hCG_1642624A0A1W2PR95 340 aa13.26□□□□□ -0.29
CTTN-208ENST00000498223 PPFIA3O75145 1194 aa13.26□□□□□ -0.29
CTTN-208ENST00000498223 CDKL5O76039 1030 aa13.26□□□□□ -0.29
CTTN-208ENST00000498223 ECM2O94769 699 aaPredicted RBP13.26□□□□□ -0.29
CTTN-208ENST00000498223 CDC37Q16543 378 aaPredicted RBP13.26□□□□□ -0.29
CTTN-208ENST00000498223 WDR78Q5VTH9 848 aa13.26□□□□□ -0.29
CTTN-208ENST00000498223 NBPF11Q86T75 865 aa13.26□□□□□ -0.29
CTTN-208ENST00000498223 TRIM22Q8IYM9 498 aa13.26□□□□□ -0.29
CTTN-208ENST00000498223 GTF3C6Q969F1 213 aa13.26□□□□□ -0.29
CTTN-208ENST00000498223 TMX3Q96JJ7 454 aa13.26□□□□□ -0.29
CTTN-208ENST00000498223 PIGSQ96S52 555 aa13.26□□□□□ -0.29
CTTN-208ENST00000498223 SPZ1Q9BXG8 430 aa13.26□□□□□ -0.29
CTTN-208ENST00000498223 SLC26A6Q9BXS9 759 aa13.26□□□□□ -0.29
CTTN-208ENST00000498223 R3HDMLQ9H3Y0 253 aa13.26□□□□□ -0.29
CTTN-208ENST00000498223 JMJD4Q9H9V9 463 aa13.26□□□□□ -0.29
CTTN-208ENST00000498223 RAVER2Q9HCJ3 691 aaKnown RBP13.26□□□□□ -0.29
CTTN-208ENST00000498223 FAM217BQ9NTX9 383 aaPredicted RBP13.26□□□□□ -0.29
CTTN-208ENST00000498223 RABGAP1Q9Y3P9 1069 aa13.26□□□□□ -0.29
CTTN-208ENST00000498223 RBBP6Q7Z6E9 1792 aaKnown RBP13.25□□□□□ -0.29
CTTN-208ENST00000498223 NID2Q14112 1375 aa13.25□□□□□ -0.29
CTTN-208ENST00000498223 TLR2O60603 784 aa13.25□□□□□ -0.29
CTTN-208ENST00000498223 PEX10O60683 326 aa13.25□□□□□ -0.29
CTTN-208ENST00000498223 SMARCA1P28370 1054 aa13.25□□□□□ -0.29
CTTN-208ENST00000498223 USH1GQ495M9 461 aa13.25□□□□□ -0.29
CTTN-208ENST00000498223 FBXO11Q86XK2 927 aa13.25□□□□□ -0.29
CTTN-208ENST00000498223 GPRC5AQ8NFJ5 357 aa13.25□□□□□ -0.29
CTTN-208ENST00000498223 PHKBQ93100 1093 aa13.25□□□□□ -0.29
CTTN-208ENST00000498223 RIOX1Q9H6W3 641 aa13.25□□□□□ -0.29
CTTN-208ENST00000498223 SLC38A10Q9HBR0 1119 aa13.25□□□□□ -0.29
CTTN-208ENST00000498223 BTBD7Q9P203 1132 aa13.25□□□□□ -0.29
CTTN-208ENST00000498223 CCPG1Q9ULG6 757 aa13.25□□□□□ -0.29
CTTN-208ENST00000498223 V9GY48 417 aaPredicted RBP13.25□□□□□ -0.29
CTTN-208ENST00000498223 PLXNA1Q9UIW2 1896 aa13.25□□□□□ -0.29
CTTN-208ENST00000498223 CNTNAP5Q8WYK1 1306 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 PNMA6FA0A0J9YX94 578 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 K7ELQ4 463 aaPredicted RBP13.24□□□□□ -0.29
CTTN-208ENST00000498223 ZBTB5O15062 677 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 HSP90AA1P07900 732 aaKnown RBP13.24□□□□□ -0.29
CTTN-208ENST00000498223 ALAS1P13196 640 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 IFNAR1P17181 557 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 STAT3P40763 770 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 ERVK-9P63128 1117 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 ERVK-24P63145 666 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 CCNA1P78396 465 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 BECN1Q14457 450 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 TMEM132BQ14DG7 1078 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 QRICH1Q2TAL8 776 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 SNRNP48Q6IEG0 339 aaKnown RBP13.24□□□□□ -0.29
CTTN-208ENST00000498223 FBXO46Q6PJ61 603 aaPredicted RBP13.24□□□□□ -0.29
CTTN-208ENST00000498223 LBX2Q6XYB7 198 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 NCAPG2Q86XI2 1143 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 SNX21Q969T3 373 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 RANBP17Q9H2T7 1088 aaKnown RBP13.24□□□□□ -0.29
CTTN-208ENST00000498223 HOMER2Q9NSB8 354 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 RBPJLQ9UBG7 517 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 ADAMTS5Q9UNA0 930 aa13.24□□□□□ -0.29
CTTN-208ENST00000498223 ZSWIM8A7E2V4 1837 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 CYTH3O43739 400 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 DTNBO60941 627 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 ANP32AP39687 249 aaKnown RBP13.23□□□□□ -0.29
CTTN-208ENST00000498223 SOX10P56693 466 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 TRAF1Q13077 416 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 KIF22Q14807 665 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 FAM110CQ1W6H9 321 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 HEATR3Q7Z4Q2 680 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 DDX11Q96FC9 970 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 AGBL1Q96MI9 1066 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 AMNQ9BXJ7 453 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 TEX13BQ9BXU2 312 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 SPATC1LQ9H0A9 340 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 TXNRD2Q9NNW7 524 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 RBM27Q9P2N5 1060 aaKnown RBP13.23□□□□□ -0.29
CTTN-208ENST00000498223 PNMA2Q9UL42 364 aa13.23□□□□□ -0.29
CTTN-208ENST00000498223 ADGRA2Q96PE1 1338 aa13.22□□□□□ -0.29
CTTN-208ENST00000498223 PTPDC1A2A3K4 754 aa13.22□□□□□ -0.29
CTTN-208ENST00000498223 PRPF3O43395 683 aaKnown RBP13.22□□□□□ -0.29
CTTN-208ENST00000498223 CNMDO75829 334 aa13.22□□□□□ -0.29
CTTN-208ENST00000498223 FMNL1O95466 1100 aaPredicted RBP13.22□□□□□ -0.29
CTTN-208ENST00000498223 ICAM1P05362 532 aa13.22□□□□□ -0.29
CTTN-208ENST00000498223 OAZ1P54368 228 aa13.22□□□□□ -0.29
CTTN-208ENST00000498223 NTRK3Q16288 839 aa13.22□□□□□ -0.29
CTTN-208ENST00000498223 SLC35G1Q2M3R5 365 aa13.22□□□□□ -0.29
CTTN-208ENST00000498223 Q3C1V9 767 aa13.22□□□□□ -0.29
CTTN-208ENST00000498223 C17orf99Q6UX52 265 aa13.22□□□□□ -0.29
CTTN-208ENST00000498223 REPS2Q8NFH8 660 aa13.22□□□□□ -0.29
CTTN-208ENST00000498223 MOV10L1Q9BXT6 1211 aaKnown RBP13.22□□□□□ -0.29
CTTN-208ENST00000498223 RNF26Q9BY78 433 aaPredicted RBP13.22□□□□□ -0.29
CTTN-208ENST00000498223 FOXD4L1Q9NU39 408 aa13.22□□□□□ -0.29
CTTN-208ENST00000498223 ORC3Q9UBD5 711 aaPredicted RBP13.22□□□□□ -0.29
CTTN-208ENST00000498223 MORF4L1Q9UBU8 362 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms