RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SLC4A3P48751 1232 aa15.71■□□□□ 0.11
CPNE1-227ENST00000498056 SSRP1Q08945 709 aaKnown RBP15.71■□□□□ 0.11
CPNE1-227ENST00000498056 CRHR2Q13324 411 aa15.71■□□□□ 0.11
CPNE1-227ENST00000498056 NTRK3Q16288 839 aa15.71■□□□□ 0.11
CPNE1-227ENST00000498056 USH1GQ495M9 461 aa15.71■□□□□ 0.11
CPNE1-227ENST00000498056 CPXCR1Q8N123 301 aa15.71■□□□□ 0.11
CPNE1-227ENST00000498056 GTF3C2Q8WUA4 911 aaPredicted RBP15.71■□□□□ 0.11
CPNE1-227ENST00000498056 P2RX7Q99572 595 aaKnown RBP15.71■□□□□ 0.11
CPNE1-227ENST00000498056 RNF26Q9BY78 433 aaPredicted RBP15.71■□□□□ 0.11
CPNE1-227ENST00000498056 RANBP17Q9H2T7 1088 aaKnown RBP15.71■□□□□ 0.11
CPNE1-227ENST00000498056 RIOX1Q9H6W3 641 aa15.71■□□□□ 0.11
CPNE1-227ENST00000498056 SLC38A10Q9HBR0 1119 aa15.71■□□□□ 0.11
CPNE1-227ENST00000498056 RBM19Q9Y4C8 960 aaKnown RBP15.71■□□□□ 0.11
CPNE1-227ENST00000498056 ZBTB5O15062 677 aa15.7■□□□□ 0.1
CPNE1-227ENST00000498056 FMNL1O95466 1100 aaPredicted RBP15.7■□□□□ 0.1
CPNE1-227ENST00000498056 ALDH1A1P00352 501 aa15.7■□□□□ 0.1
CPNE1-227ENST00000498056 FUT2Q10981 343 aa15.7■□□□□ 0.1
CPNE1-227ENST00000498056 HEATR3Q7Z4Q2 680 aa15.7■□□□□ 0.1
CPNE1-227ENST00000498056 ANKRD13CQ8N6S4 541 aa15.7■□□□□ 0.1
CPNE1-227ENST00000498056 MB21D1Q8N884 522 aa15.7■□□□□ 0.1
CPNE1-227ENST00000498056 GPKOWQ92917 476 aaPredicted RBP eCLIP15.7■□□□□ 0.11e-7■■■■□ 26.1
CPNE1-227ENST00000498056 ZFYVE28Q9HCC9 887 aa15.7■□□□□ 0.1
CPNE1-227ENST00000498056 RAVER2Q9HCJ3 691 aaKnown RBP15.7■□□□□ 0.1
CPNE1-227ENST00000498056 HOXC10Q9NYD6 342 aa15.7■□□□□ 0.1
CPNE1-227ENST00000498056 RBM27Q9P2N5 1060 aaKnown RBP15.7■□□□□ 0.1
CPNE1-227ENST00000498056 CCPG1Q9ULG6 757 aa15.7■□□□□ 0.1
CPNE1-227ENST00000498056 ADGRA2Q96PE1 1338 aa15.69■□□□□ 0.1
CPNE1-227ENST00000498056 MCM3APO60318 1980 aa15.69■□□□□ 0.1
CPNE1-227ENST00000498056 LRRC37A2A6NM11 1700 aa15.69■□□□□ 0.1
CPNE1-227ENST00000498056 SMARCA1P28370 1054 aa15.69■□□□□ 0.1
CPNE1-227ENST00000498056 GCLCP48506 637 aaPredicted RBP15.69■□□□□ 0.1
CPNE1-227ENST00000498056 FOSBP53539 338 aa15.69■□□□□ 0.1
CPNE1-227ENST00000498056 SNRNP48Q6IEG0 339 aaKnown RBP15.69■□□□□ 0.1
CPNE1-227ENST00000498056 LBX2Q6XYB7 198 aa15.69■□□□□ 0.1
CPNE1-227ENST00000498056 SPRYD3Q8NCJ5 442 aa15.69■□□□□ 0.1
CPNE1-227ENST00000498056 LLPHQ9BRT6 129 aaKnown RBP15.69■□□□□ 0.1
CPNE1-227ENST00000498056 HOMER2Q9NSB8 354 aa15.69■□□□□ 0.1
CPNE1-227ENST00000498056 BTBD7Q9P203 1132 aa15.69■□□□□ 0.1
CPNE1-227ENST00000498056 ORC3Q9UBD5 711 aaPredicted RBP15.69■□□□□ 0.1
CPNE1-227ENST00000498056 CPA4Q9UI42 421 aa15.69■□□□□ 0.1
CPNE1-227ENST00000498056 SMC3Q9UQE7 1217 aa15.69■□□□□ 0.1
CPNE1-227ENST00000498056 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.69■□□□□ 0.1
CPNE1-227ENST00000498056 V9GY48 417 aaPredicted RBP15.69■□□□□ 0.1
CPNE1-227ENST00000498056 CASP8AP2Q9UKL3 1982 aa15.69■□□□□ 0.1
CPNE1-227ENST00000498056 MYH7BA7E2Y1 1941 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 PNMA6FA0A0J9YX94 578 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 DEXIO95424 95 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 ICAM1P05362 532 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 FDX1P10109 184 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 SCG2P13521 617 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 CUL4AQ13619 759 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 TMEM132BQ14DG7 1078 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 FBXO11Q86XK2 927 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 FAM184AQ8NB25 1140 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 REPS2Q8NFH8 660 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 MTMR8Q96EF0 704 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 AMNQ9BXJ7 453 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 TEX13BQ9BXU2 312 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 TXNRD2Q9NNW7 524 aa15.68■□□□□ 0.1
CPNE1-227ENST00000498056 ZNF214Q9UL59 606 aaPredicted RBP15.68■□□□□ 0.1
CPNE1-227ENST00000498056 PRPF3O43395 683 aaKnown RBP15.67■□□□□ 0.1
CPNE1-227ENST00000498056 CA12O43570 354 aa15.67■□□□□ 0.1
CPNE1-227ENST00000498056 PPP1R11O60927 126 aaPredicted RBP15.67■□□□□ 0.1
CPNE1-227ENST00000498056 TRPA1O75762 1119 aa15.67■□□□□ 0.1
CPNE1-227ENST00000498056 CNMDO75829 334 aa15.67■□□□□ 0.1
CPNE1-227ENST00000498056 ALAS1P13196 640 aa15.67■□□□□ 0.1
CPNE1-227ENST00000498056 ERVK-9P63128 1117 aa15.67■□□□□ 0.1
CPNE1-227ENST00000498056 ERVK-24P63145 666 aa15.67■□□□□ 0.1
CPNE1-227ENST00000498056 HMGN5P82970 282 aaKnown RBP15.67■□□□□ 0.1
CPNE1-227ENST00000498056 PFKFB3Q16875 520 aaPredicted RBP15.67■□□□□ 0.1
CPNE1-227ENST00000498056 WWC2Q6AWC2 1192 aa15.67■□□□□ 0.1
CPNE1-227ENST00000498056 SMARCC2Q8TAQ2 1214 aa15.67■□□□□ 0.1
CPNE1-227ENST00000498056 AGBL1Q96MI9 1066 aa15.67■□□□□ 0.1
CPNE1-227ENST00000498056 AIFM3Q96NN9 605 aa15.67■□□□□ 0.1
CPNE1-227ENST00000498056 BEGAINQ9BUH8 593 aa15.67■□□□□ 0.1
CPNE1-227ENST00000498056 ADAMTS5Q9UNA0 930 aa15.67■□□□□ 0.1
CPNE1-227ENST00000498056 RABGAP1Q9Y3P9 1069 aa15.67■□□□□ 0.1
CPNE1-227ENST00000498056 ZNF536O15090 1300 aa15.67■□□□□ 0.1
CPNE1-227ENST00000498056 TLR2O60603 784 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 ECM2O94769 699 aaPredicted RBP15.66■□□□□ 0.1
CPNE1-227ENST00000498056 TBC1D8O95759 1140 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 GJB2P29033 226 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 OAZ1P54368 228 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 NAPAP54920 295 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 MAP2K1Q02750 393 aaPredicted RBP15.66■□□□□ 0.1
CPNE1-227ENST00000498056 FAM110CQ1W6H9 321 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 WDR78Q5VTH9 848 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 POTEEQ6S8J3 1075 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 WASF1Q92558 559 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 COA7Q96BR5 231 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 ALG1Q9BT22 464 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 SPATC1LQ9H0A9 340 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 CWC22Q9HCG8 908 aaKnown RBP15.66■□□□□ 0.1
CPNE1-227ENST00000498056 RNF146Q9NTX7 359 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 RNF186Q9NXI6 227 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 VPS54Q9P1Q0 977 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 RBPJLQ9UBG7 517 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 DAXXQ9UER7 740 aaPredicted RBP15.66■□□□□ 0.1
CPNE1-227ENST00000498056 ABCB11O95342 1321 aa15.66■□□□□ 0.1
CPNE1-227ENST00000498056 hCG_1984214I3L0E3 225 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms