RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 VEGFAP15692 232 aaPredicted RBP9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 LMNB1P20700 586 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 ADCY7P51828 1080 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 NDUFA8P51970 172 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 TYRO3Q06418 890 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 IKQ13123 557 aaPredicted RBP9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 TBC1D10BQ4KMP7 808 aaPredicted RBP9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 NOM1Q5C9Z4 860 aaKnown RBP9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 AXDND1Q5T1B0 1012 aaPredicted RBP9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 RESP18Q5W5W9 173 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 KRT25Q7Z3Z0 450 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 APOBEC3FQ8IUX4 373 aaKnown RBP9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 CKAP2LQ8IYA6 745 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 FMR1NBQ8N0W7 255 aaPredicted RBP9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 RNF214Q8ND24 703 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 ANP32BQ92688 251 aaKnown RBP9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 DPF2Q92785 391 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 FUCA2Q9BTY2 467 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 SH2D4AQ9H788 454 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 VAT1LQ9HCJ6 419 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 GOPCQ9HD26 462 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 C6orf50Q9HD87 102 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 FBXO2Q9UK22 296 aaPredicted RBP9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 SYNPO2Q9UMS6 1093 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 MORC2Q9Y6X9 1032 aaPredicted RBP9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 SSC5DA1L4H1 1573 aa9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 GOLGB1Q14789 3259 aaKnown RBP9.23□□□□□ -0.93
PDZRN3-212ENST00000498048 WNT7AO00755 349 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 GALR2O43603 387 aaPredicted RBP9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 TBC1D12O60347 775 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 EGFRP00533 1210 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 CMA1P23946 247 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 GNA11P29992 359 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 SLC16A2P36021 539 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 SYKP43405 635 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 SNW1Q13573 536 aaKnown RBP9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 RRP1BQ14684 758 aaKnown RBP9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 CDC37Q16543 378 aaPredicted RBP9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 STX1AQ16623 288 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 TTBK2Q6IQ55 1244 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 SASS6Q6UVJ0 657 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 ARHGAP27Q6ZUM4 889 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 SAMD7Q7Z3H4 446 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 ADGRF4Q8IZF3 695 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 REXO1Q8N1G1 1221 aaKnown RBP9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 ENGASEQ8NFI3 743 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 MKL1Q969V6 931 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 GMCL1Q96IK5 515 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 ZMYND12Q9H0C1 365 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 JMJD4Q9H9V9 463 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 FAM13BQ9NYF5 915 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 CNOT7Q9UIV1 285 aaKnown RBP9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 HACL1Q9UJ83 578 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 TRPC6Q9Y210 931 aa9.22□□□□□ -0.93
PDZRN3-212ENST00000498048 PLXNA1Q9UIW2 1896 aa9.21□□□□□ -0.93
PDZRN3-212ENST00000498048 PNMA6FA0A0J9YX94 578 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 SMCO2A6NFE2 343 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 H7C1D1 291 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 M0R2N6 131 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 ZBTB5O15062 677 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 ADAMTS3O15072 1205 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 BMP3P12645 472 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 PTPREP23469 700 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 MCM7P33993 719 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 JAG1P78504 1218 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 ATP2C1P98194 919 aaPredicted RBP9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 RASA3Q14644 834 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 NONOQ15233 471 aaKnown RBP eCLIP9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 INF2Q27J81 1249 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 SYDE2Q5VT97 1194 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 SHC4Q6S5L8 630 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 TRPM4Q8TD43 1214 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 FERMT2Q96AC1 680 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 CLIC6Q96NY7 704 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 NUP88Q99567 741 aaPredicted RBP9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 FEZ1Q99689 392 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 GGA3Q9NZ52 723 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 PCDHA6Q9UN73 950 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 SCAF8Q9UPN6 1271 aaKnown RBP9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 HPSEQ9Y251 543 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 PCDHA8Q9Y5H6 950 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 MRVI1Q9Y6F6 885 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 ASTN2O75129 1339 aaPredicted RBP9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 PLXNB2O15031 1838 aa9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 MYH9P35579 1960 aaKnown RBP9.21□□□□□ -0.94
PDZRN3-212ENST00000498048 FAM237AA0A1B0GTK4 181 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 USP17L10C9JJH3 530 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 F5H6K3 240 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 PPP1R11O60927 126 aaPredicted RBP9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 ZNF202O95125 648 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 ASNSP08243 561 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 CAP2P40123 477 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 ECE1P42892 770 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 GRIN1Q05586 938 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 KLRC3Q07444 240 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 CCDC173Q0VFZ6 552 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 ZRSR1Q15695 479 aaKnown RBP9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 ZNF174Q15697 407 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms