RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 ZRSR2Q15696 482 aaKnown RBP8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 ZBTB33Q86T24 672 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 MICALL1Q8N3F8 863 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 NLGN2Q8NFZ4 835 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 TCHPQ9BT92 498 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 CD209Q9NNX6 404 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 CYP2D6P10635 497 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 CCDC174Q6PII3 467 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 C3orf67Q6ZVT6 689 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 PPM1EQ8WY54 764 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 SPTLC3Q9NUV7 552 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 SPEF2Q9C093 1822 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 ERLIN1O75477 346 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 ALAS1P13196 640 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 STX17P56962 302 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 NONOQ15233 471 aaKnown RBP eCLIP8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 TAF12Q16514 161 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 EEPD1Q7L9B9 569 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 FAM177A1Q8N128 213 aaPredicted RBP8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 COL16A1Q07092 1604 aaPredicted RBP8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 KLRF2D3W0D1 207 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 PSMA7O14818 248 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 SLFN14P0C7P3 912 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 ERCC5P28715 1186 aaPredicted RBP8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 NBPF11Q86T75 865 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 DHX40Q8IX18 779 aaKnown RBP8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 SYMPKQ92797 1274 aaKnown RBP8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 LRRC27Q9C0I9 530 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 FANCLQ9NW38 375 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 GDF11O95390 407 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 PTPAQ15257 358 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 C12orf60Q5U649 245 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 OXER1Q8TDS5 423 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 GSDMAQ96QA5 445 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 TSPYL1Q9H0U9 437 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 SEC23AQ15436 765 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 DYNLL2Q96FJ2 89 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 SH3GLB2Q9NR46 395 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 FAM217BQ9NTX9 383 aaPredicted RBP8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 PCDHA4Q9UN74 947 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 RIOK3O14730 519 aaKnown RBP8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 GYS1P13807 737 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 LONP1P36776 959 aaKnown RBP8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 PFKFB3Q16875 520 aaPredicted RBP8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 LETM2Q2VYF4 491 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 PODNQ7Z5L7 613 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 ENOX1Q8TC92 643 aaKnown RBP8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 SH3RF3Q8TEJ3 882 aaPredicted RBP8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 CPLX3Q8WVH0 158 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 UBA5Q9GZZ9 404 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 EXOC1Q9NV70 894 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 TUBE1Q9UJT0 475 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 MAN1B1Q9UKM7 699 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 NHSL1Q5SYE7 1610 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 FGFR1OPO95684 399 aaKnown RBP8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 SEPT7Q16181 437 aaKnown RBP8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 SKIDA1Q1XH10 827 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 ARHGAP29Q52LW3 1261 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 ADGRA1Q86SQ6 560 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 FAM114A1Q8IWE2 563 aa8.97□□□□□ -0.97
HLA-DMB-262ENST00000498020 SYNRGQ9UMZ2 1314 aa8.96□□□□□ -0.97
HLA-DMB-262ENST00000498020 URI1O94763 535 aaPredicted RBP8.96□□□□□ -0.97
HLA-DMB-262ENST00000498020 PPP1R2P41236 205 aa8.96□□□□□ -0.97
HLA-DMB-262ENST00000498020 TROAPQ12815 778 aa8.96□□□□□ -0.97
HLA-DMB-262ENST00000498020 USH1GQ495M9 461 aa8.96□□□□□ -0.97
HLA-DMB-262ENST00000498020 CERKLQ49MI3 558 aaPredicted RBP8.96□□□□□ -0.97
HLA-DMB-262ENST00000498020 IQCEQ6IPM2 695 aa8.96□□□□□ -0.97
HLA-DMB-262ENST00000498020 UBXN4Q92575 508 aa8.96□□□□□ -0.97
HLA-DMB-262ENST00000498020 TRIM47Q96LD4 638 aa8.96□□□□□ -0.97
HLA-DMB-262ENST00000498020 FBXO2Q9UK22 296 aaPredicted RBP8.96□□□□□ -0.97
HLA-DMB-262ENST00000498020 MROH7-TTC4A0A0A0MT08 1334 aa8.96□□□□□ -0.97
HLA-DMB-262ENST00000498020 CCDC66A2RUB6 948 aa8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 TFRCP02786 760 aaKnown RBP8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 KLRK1P26718 216 aa8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 ZNF827Q17R98 1081 aa8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 ELOA2Q8IYF1 753 aaPredicted RBP8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 MICAL1Q8TDZ2 1067 aa8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 GPKOWQ92917 476 aaPredicted RBP eCLIP8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 NUP88Q99567 741 aaPredicted RBP8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 BAG1Q99933 345 aaPredicted RBP8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 PHF20Q9BVI0 1012 aa8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 GLIS2Q9BZE0 524 aaPredicted RBP8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 PDGFDQ9GZP0 370 aaPredicted RBP8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 GBA2Q9HCG7 927 aaPredicted RBP8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 TRIM17Q9Y577 477 aa8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 SPDYE3A6NKU9 549 aa8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 ARHGAP6O43182 974 aa8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 GTPBP6O43824 516 aaPredicted RBP8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 ARL6IP4Q66PJ3 421 aaKnown RBP8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 LEKR1Q6ZMV7 388 aa8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 TRMT44Q8IYL2 757 aaKnown RBP8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 COA1Q9GZY4 146 aa8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 BCL2L12Q9HB09 334 aa8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 CGNQ9P2M7 1197 aaKnown RBP8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 HPSEQ9Y251 543 aa8.96□□□□□ -0.98
HLA-DMB-262ENST00000498020 SMCO2A6NFE2 343 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 KIF5CO60282 957 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 NMT2O60551 498 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms