RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 V9GY48 417 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 NUTM2BA6NNL0 878 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 NUTM2EB1AL46 878 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 ZC3H6P61129 1189 aaKnown RBP11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 MDM2Q00987 491 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 PRPF4BQ13523 1007 aaKnown RBP11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 GNPTABQ3T906 1256 aa11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 AKAP4Q5JQC9 854 aa11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 MIGA1Q8NAN2 632 aa11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 TAF4BQ92750 862 aa11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 ZNF496Q96IT1 587 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 TBC1D2BQ9UPU7 963 aa11.79□□□□□ -0.52
TRAPPC12-223ENST00000497597 PSMD14O00487 310 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 MDH1P40925 334 aaKnown RBP11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 SMTNP53814 917 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 EHHADHQ08426 723 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 PTGDRQ13258 359 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 PIK3AP1Q6ZUJ8 805 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 RRAGAQ7L523 313 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 CCDC63Q8NA47 563 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 DYDC1Q8WWB3 177 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 HVCN1Q96D96 273 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 LBHD1Q9BQE6 289 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 AGXT2Q9BYV1 514 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 HYOU1Q9Y4L1 999 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 IFT172Q9UG01 1749 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 ZC3H4Q9UPT8 1303 aaKnown RBP11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 PPP1R3GB7ZBB8 358 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 SHOX2O60902 331 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 MMP1P03956 469 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 IL15P40933 162 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 PRCPP42785 496 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 ADAT2Q7Z6V5 191 aaKnown RBP11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 ARFGAP2Q8N6H7 521 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 ARMC2Q8NEN0 867 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 MDM1Q8TC05 714 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 PARD3BQ8TEW8 1205 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 OSBPL9Q96SU4 736 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 DPH5Q9H2P9 285 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 MYH8P13535 1937 aa11.78□□□□□ -0.52
TRAPPC12-223ENST00000497597 TARSL2A2RTX5 802 aaKnown RBP11.77□□□□□ -0.52
TRAPPC12-223ENST00000497597 SH2B2O14492 632 aaPredicted RBP11.77□□□□□ -0.52
TRAPPC12-223ENST00000497597 FSBPO95073 299 aa11.77□□□□□ -0.52
TRAPPC12-223ENST00000497597 HOXB7P09629 217 aa11.77□□□□□ -0.52
TRAPPC12-223ENST00000497597 FNTAP49354 379 aa11.77□□□□□ -0.52
TRAPPC12-223ENST00000497597 TRIM14Q14142 442 aa11.77□□□□□ -0.52
TRAPPC12-223ENST00000497597 MFSD6Q6ZSS7 791 aa11.77□□□□□ -0.52
TRAPPC12-223ENST00000497597 FUKQ8N0W3 1084 aa11.77□□□□□ -0.52
TRAPPC12-223ENST00000497597 MB21D1Q8N884 522 aa11.77□□□□□ -0.52
TRAPPC12-223ENST00000497597 MGARPQ8TDB4 240 aa11.77□□□□□ -0.52
TRAPPC12-223ENST00000497597 AENQ8WTP8 325 aaKnown RBP11.77□□□□□ -0.52
TRAPPC12-223ENST00000497597 RAPGEF4Q8WZA2 1011 aa11.77□□□□□ -0.52
TRAPPC12-223ENST00000497597 AMOTL2Q9Y2J4 779 aa11.77□□□□□ -0.52
TRAPPC12-223ENST00000497597 SRPRBQ9Y5M8 271 aaKnown RBP11.77□□□□□ -0.52
TRAPPC12-223ENST00000497597 EYA2O00167 538 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 PSMA7O14818 248 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 DIAPH2O60879 1101 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 GLI1P08151 1106 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 NLRP5P59047 1200 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 KCNB1Q14721 858 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 GKAP1Q5VSY0 366 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 TRIM58Q8NG06 486 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 SNX12Q9UMY4 172 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 KIF20BQ96Q89 1820 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 EIF4A3P38919 411 aaKnown RBP11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 MAP2K1Q02750 393 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 ALS2CLQ60I27 953 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 EMBQ6PCB8 327 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 TUBGCP2Q9BSJ2 902 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 GOLPH3Q9H4A6 298 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 ARMT1Q9H993 441 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 ZSWIM5Q9P217 1185 aa11.77□□□□□ -0.53
TRAPPC12-223ENST00000497597 GMNCA6NCL1 334 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 QPCTQ16769 361 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 ZCWPW1Q9H0M4 648 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 ZNF233A6NK53 670 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 DNM1LO00429 736 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 CTNND1O60716 968 aaKnown RBP11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 SLC8A1P32418 973 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 UBA7P41226 1012 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 CFAP221Q4G0U5 840 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 ATP6V1G3Q96LB4 118 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 GSDMAQ96QA5 445 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 SH3GL2Q99962 352 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 CEP104O60308 925 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 MBD4O95243 580 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 RPN1P04843 607 aaKnown RBP11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 SEMA3FQ13275 785 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 TTC38Q5R3I4 469 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 APTXQ7Z2E3 356 aaKnown RBP11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 SPATS2Q86XZ4 545 aaKnown RBP11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 SAAL1Q96ER3 474 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 AP1M1Q9BXS5 423 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 NOD2Q9HC29 1040 aa11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 G3BP2Q9UN86 482 aaKnown RBP11.76□□□□□ -0.53
TRAPPC12-223ENST00000497597 ROBO2Q9HCK4 1378 aa11.75□□□□□ -0.53
TRAPPC12-223ENST00000497597 ALKQ9UM73 1620 aa11.75□□□□□ -0.53
TRAPPC12-223ENST00000497597 SRCAPQ6ZRS2 3230 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms