RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 STAT3P40763 770 aa13.44□□□□□ -0.26
HLA-B-254ENST00000497377 RGS2P41220 211 aa13.44□□□□□ -0.26
HLA-B-254ENST00000497377 IKQ13123 557 aaPredicted RBP13.44□□□□□ -0.26
HLA-B-254ENST00000497377 CCDC96Q2M329 555 aa13.44□□□□□ -0.26
HLA-B-254ENST00000497377 MORN1Q5T089 497 aa13.44□□□□□ -0.26
HLA-B-254ENST00000497377 GPATCH4Q5T3I0 446 aaKnown RBP13.44□□□□□ -0.26
HLA-B-254ENST00000497377 WDR78Q5VTH9 848 aa13.44□□□□□ -0.26
HLA-B-254ENST00000497377 CREB3L3Q68CJ9 461 aa13.44□□□□□ -0.26
HLA-B-254ENST00000497377 ENAHQ8N8S7 591 aaPredicted RBP13.44□□□□□ -0.26
HLA-B-254ENST00000497377 PNMA1Q8ND90 353 aa13.44□□□□□ -0.26
HLA-B-254ENST00000497377 REPS2Q8NFH8 660 aa13.44□□□□□ -0.26
HLA-B-254ENST00000497377 NKX2-3Q8TAU0 364 aa13.44□□□□□ -0.26
HLA-B-254ENST00000497377 MTA3Q9BTC8 594 aa13.44□□□□□ -0.26
HLA-B-254ENST00000497377 TEX13BQ9BXU2 312 aa13.44□□□□□ -0.26
HLA-B-254ENST00000497377 SLC38A10Q9HBR0 1119 aa13.44□□□□□ -0.26
HLA-B-254ENST00000497377 EPB41L2O43491 1005 aaKnown RBP13.43□□□□□ -0.26
HLA-B-254ENST00000497377 ERCC3P19447 782 aa13.43□□□□□ -0.26
HLA-B-254ENST00000497377 UBXN2AP68543 259 aa13.43□□□□□ -0.26
HLA-B-254ENST00000497377 MAP2K5Q13163 448 aa13.43□□□□□ -0.26
HLA-B-254ENST00000497377 GRB14Q14449 540 aa13.43□□□□□ -0.26
HLA-B-254ENST00000497377 SEC23AQ15436 765 aa13.43□□□□□ -0.26
HLA-B-254ENST00000497377 IFIT1BQ5T764 474 aaKnown RBP13.43□□□□□ -0.26
HLA-B-254ENST00000497377 BTNL9Q6UXG8 535 aa13.43□□□□□ -0.26
HLA-B-254ENST00000497377 KCTD1Q719H9 257 aa13.43□□□□□ -0.26
HLA-B-254ENST00000497377 CYB5R4Q7L1T6 521 aa13.43□□□□□ -0.26
HLA-B-254ENST00000497377 NCAPG2Q86XI2 1143 aa13.43□□□□□ -0.26
HLA-B-254ENST00000497377 USP6NLQ92738 828 aa13.43□□□□□ -0.26
HLA-B-254ENST00000497377 APBA2Q99767 749 aa13.43□□□□□ -0.26
HLA-B-254ENST00000497377 MTMR7Q9Y216 660 aa13.43□□□□□ -0.26
HLA-B-254ENST00000497377 IFIT3O14879 490 aaKnown RBP13.42□□□□□ -0.26
HLA-B-254ENST00000497377 HOXC6P09630 235 aa13.42□□□□□ -0.26
HLA-B-254ENST00000497377 FCER1AP12319 257 aa13.42□□□□□ -0.26
HLA-B-254ENST00000497377 ZKSCAN1P17029 563 aaPredicted RBP13.42□□□□□ -0.26
HLA-B-254ENST00000497377 EMP3P54852 163 aa13.42□□□□□ -0.26
HLA-B-254ENST00000497377 ZNF543Q08ER8 600 aa13.42□□□□□ -0.26
HLA-B-254ENST00000497377 KRT32Q14532 448 aa13.42□□□□□ -0.26
HLA-B-254ENST00000497377 TSGA10IPQ3SY00 556 aa13.42□□□□□ -0.26
HLA-B-254ENST00000497377 STOX1Q6ZVD7 989 aa13.42□□□□□ -0.26
HLA-B-254ENST00000497377 MB21D2Q8IYB1 491 aaPredicted RBP13.42□□□□□ -0.26
HLA-B-254ENST00000497377 SH3TC2Q8TF17 1288 aa13.42□□□□□ -0.26
HLA-B-254ENST00000497377 SLC5A4Q9NY91 659 aa13.42□□□□□ -0.26
HLA-B-254ENST00000497377 BIN2Q9UBW5 565 aaPredicted RBP13.42□□□□□ -0.26
HLA-B-254ENST00000497377 PNMA2Q9UL42 364 aa13.42□□□□□ -0.26
HLA-B-254ENST00000497377 TAF6LQ9Y6J9 622 aa13.42□□□□□ -0.26
HLA-B-254ENST00000497377 RBBP6Q7Z6E9 1792 aaKnown RBP13.42□□□□□ -0.26
HLA-B-254ENST00000497377 HMGCRP04035 888 aa13.41□□□□□ -0.26
HLA-B-254ENST00000497377 MCM5P33992 734 aa13.41□□□□□ -0.26
HLA-B-254ENST00000497377 TKFCQ3LXA3 575 aa13.41□□□□□ -0.26
HLA-B-254ENST00000497377 ASPRV1Q53RT3 343 aa13.41□□□□□ -0.26
HLA-B-254ENST00000497377 SYDE2Q5VT97 1194 aa13.41□□□□□ -0.26
HLA-B-254ENST00000497377 SNRNP48Q6IEG0 339 aaKnown RBP13.41□□□□□ -0.26
HLA-B-254ENST00000497377 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.41□□□□□ -0.26
HLA-B-254ENST00000497377 TMEM87BQ96K49 555 aa13.41□□□□□ -0.26
HLA-B-254ENST00000497377 FBXO40Q9UH90 709 aa13.41□□□□□ -0.26
HLA-B-254ENST00000497377 PRR12Q9ULL5 1215 aa13.41□□□□□ -0.26
HLA-B-254ENST00000497377 STK24Q9Y6E0 443 aa13.41□□□□□ -0.26
HLA-B-254ENST00000497377 EIF5BO60841 1220 aaKnown RBP13.4□□□□□ -0.26
HLA-B-254ENST00000497377 INHAP05111 366 aa13.4□□□□□ -0.26
HLA-B-254ENST00000497377 ELNP15502 786 aa13.4□□□□□ -0.26
HLA-B-254ENST00000497377 CAPN2P17655 700 aa13.4□□□□□ -0.26
HLA-B-254ENST00000497377 CYP2B6P20813 491 aa13.4□□□□□ -0.26
HLA-B-254ENST00000497377 ADORA2AP29274 412 aa13.4□□□□□ -0.26
HLA-B-254ENST00000497377 KCTD2Q14681 263 aa13.4□□□□□ -0.26
HLA-B-254ENST00000497377 WTAPQ15007 396 aa13.4□□□□□ -0.26
HLA-B-254ENST00000497377 TMEM67Q5HYA8 995 aa13.4□□□□□ -0.26
HLA-B-254ENST00000497377 DPP9Q86TI2 863 aa13.4□□□□□ -0.26
HLA-B-254ENST00000497377 CPXCR1Q8N123 301 aa13.4□□□□□ -0.26
HLA-B-254ENST00000497377 TMTC2Q8N394 836 aa13.4□□□□□ -0.26
HLA-B-254ENST00000497377 CHST13Q8NET6 341 aa13.4□□□□□ -0.26
HLA-B-254ENST00000497377 RAVER2Q9HCJ3 691 aaKnown RBP13.4□□□□□ -0.26
HLA-B-254ENST00000497377 GPCPD1Q9NPB8 672 aa13.4□□□□□ -0.26
HLA-B-254ENST00000497377 ZNFX1Q9P2E3 1918 aaKnown RBP13.4□□□□□ -0.26
HLA-B-254ENST00000497377 FRMPD2Q68DX3 1309 aaPredicted RBP13.39□□□□□ -0.27
HLA-B-254ENST00000497377 PRC1O43663 620 aa13.39□□□□□ -0.27
HLA-B-254ENST00000497377 HMGB1P09429 215 aaKnown RBP13.39□□□□□ -0.27
HLA-B-254ENST00000497377 PARP1P09874 1014 aaKnown RBP13.39□□□□□ -0.27
HLA-B-254ENST00000497377 TTBK2Q6IQ55 1244 aa13.39□□□□□ -0.27
HLA-B-254ENST00000497377 RASGRP2Q7LDG7 609 aa13.39□□□□□ -0.27
HLA-B-254ENST00000497377 IGDCC4Q8TDY8 1250 aa13.39□□□□□ -0.27
HLA-B-254ENST00000497377 CHMP4CQ96CF2 233 aa13.39□□□□□ -0.27
HLA-B-254ENST00000497377 MMP19Q99542 508 aa13.39□□□□□ -0.27
HLA-B-254ENST00000497377 RANBP17Q9H2T7 1088 aaKnown RBP13.39□□□□□ -0.27
HLA-B-254ENST00000497377 WDR19Q8NEZ3 1342 aa13.39□□□□□ -0.27
HLA-B-254ENST00000497377 KIAA0100Q14667 2235 aaKnown RBP13.38□□□□□ -0.27
HLA-B-254ENST00000497377 ICAM1P05362 532 aa13.38□□□□□ -0.27
HLA-B-254ENST00000497377 CCL5P13501 91 aa13.38□□□□□ -0.27
HLA-B-254ENST00000497377 HSPA4P34932 840 aa13.38□□□□□ -0.27
HLA-B-254ENST00000497377 SLC16A2P36021 539 aa13.38□□□□□ -0.27
HLA-B-254ENST00000497377 RGS19P49795 217 aa13.38□□□□□ -0.27
HLA-B-254ENST00000497377 ANTXR2P58335 489 aa13.38□□□□□ -0.27
HLA-B-254ENST00000497377 MFSD14CQ5VZR4 134 aa13.38□□□□□ -0.27
HLA-B-254ENST00000497377 OLFML2BQ68BL8 750 aa13.38□□□□□ -0.27
HLA-B-254ENST00000497377 CATIPQ7Z7H3 387 aa13.38□□□□□ -0.27
HLA-B-254ENST00000497377 ZNF710Q8N1W2 664 aa13.38□□□□□ -0.27
HLA-B-254ENST00000497377 TRIB2Q92519 343 aa13.38□□□□□ -0.27
HLA-B-254ENST00000497377 KCNB2Q92953 911 aa13.38□□□□□ -0.27
HLA-B-254ENST00000497377 NEK1Q96PY6 1258 aa13.38□□□□□ -0.27
HLA-B-254ENST00000497377 DIS3Q9Y2L1 958 aaKnown RBP13.38□□□□□ -0.27
HLA-B-254ENST00000497377 RIPK3Q9Y572 518 aa13.38□□□□□ -0.27
HLA-B-254ENST00000497377 ZNF536O15090 1300 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms