RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 RAVER2Q9HCJ3 691 aaKnown RBP20.01■□□□□ 0.79
TRAPPC3-207ENST00000497251 ZHX1Q9UKY1 873 aaPredicted RBP20.01■□□□□ 0.79
TRAPPC3-207ENST00000497251 FAAP100Q0VG06 881 aa20■□□□□ 0.79
TRAPPC3-207ENST00000497251 ZMYM1Q5SVZ6 1142 aa20■□□□□ 0.79
TRAPPC3-207ENST00000497251 PHF6Q8IWS0 365 aaKnown RBP eCLIP20■□□□□ 0.79
TRAPPC3-207ENST00000497251 STAG1Q8WVM7 1258 aa20■□□□□ 0.79
TRAPPC3-207ENST00000497251 RNPC3Q96LT9 517 aaKnown RBP20■□□□□ 0.79
TRAPPC3-207ENST00000497251 ACAD9Q9H845 621 aa20■□□□□ 0.79
TRAPPC3-207ENST00000497251 ASB14A6NK59 587 aa19.99■□□□□ 0.79
TRAPPC3-207ENST00000497251 M0R2C6 588 aa19.99■□□□□ 0.79
TRAPPC3-207ENST00000497251 PRDM1O75626 825 aa19.99■□□□□ 0.79
TRAPPC3-207ENST00000497251 TIMP1P01033 207 aa19.99■□□□□ 0.79
TRAPPC3-207ENST00000497251 SLC1A4P43007 532 aa19.99■□□□□ 0.79
TRAPPC3-207ENST00000497251 CDK7P50613 346 aa19.99■□□□□ 0.79
TRAPPC3-207ENST00000497251 TFAP4Q01664 338 aa19.99■□□□□ 0.79
TRAPPC3-207ENST00000497251 PPARAQ07869 468 aa19.99■□□□□ 0.79
TRAPPC3-207ENST00000497251 CCDC144BQ3MJ40 725 aa19.99■□□□□ 0.79
TRAPPC3-207ENST00000497251 STK11IPQ8N1F8 1099 aa19.99■□□□□ 0.79
TRAPPC3-207ENST00000497251 CDX2Q99626 313 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC3-207ENST00000497251 FSD1Q9BTV5 496 aa19.99■□□□□ 0.79
TRAPPC3-207ENST00000497251 MYH4Q9Y623 1939 aa19.99■□□□□ 0.79
TRAPPC3-207ENST00000497251 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC3-207ENST00000497251 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC3-207ENST00000497251 TMEM232C9JQI7 657 aa19.98■□□□□ 0.79
TRAPPC3-207ENST00000497251 CABYRO75952 493 aa19.98■□□□□ 0.79
TRAPPC3-207ENST00000497251 C6orf222P0C671 652 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC3-207ENST00000497251 CCDC129Q6ZRS4 1044 aa19.98■□□□□ 0.79
TRAPPC3-207ENST00000497251 ARMCX2Q7L311 632 aa19.98■□□□□ 0.79
TRAPPC3-207ENST00000497251 PI4K2BQ8TCG2 481 aa19.98■□□□□ 0.79
TRAPPC3-207ENST00000497251 ZBTB47Q9UFB7 747 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC3-207ENST00000497251 A0A0U1RQG5 324 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC3-207ENST00000497251 ITGB8P26012 769 aa19.97■□□□□ 0.79
TRAPPC3-207ENST00000497251 PPIGQ13427 754 aaKnown RBP eCLIP19.97■□□□□ 0.792e-6■■□□□ 13.5
TRAPPC3-207ENST00000497251 GNASQ5JWF2 1037 aa19.97■□□□□ 0.79
TRAPPC3-207ENST00000497251 TSHZ3Q63HK5 1081 aa19.97■□□□□ 0.79
TRAPPC3-207ENST00000497251 RCSD1Q6JBY9 416 aa19.97■□□□□ 0.79
TRAPPC3-207ENST00000497251 MFSD5Q6N075 450 aa19.97■□□□□ 0.79
TRAPPC3-207ENST00000497251 LRRC47Q8N1G4 583 aaKnown RBP19.97■□□□□ 0.79
TRAPPC3-207ENST00000497251 FAM133AQ8N9E0 248 aa19.97■□□□□ 0.79
TRAPPC3-207ENST00000497251 FAM161BQ96MY7 647 aa19.97■□□□□ 0.79
TRAPPC3-207ENST00000497251 TBX21Q9UL17 535 aa19.97■□□□□ 0.79
TRAPPC3-207ENST00000497251 PNMA2Q9UL42 364 aa19.97■□□□□ 0.79
TRAPPC3-207ENST00000497251 UNC80Q8N2C7 3258 aa19.96■□□□□ 0.79
TRAPPC3-207ENST00000497251 LOC102724159A0A0B4J2E5 919 aa19.96■□□□□ 0.79
TRAPPC3-207ENST00000497251 ARVCFO00192 962 aa19.96■□□□□ 0.79
TRAPPC3-207ENST00000497251 TLR3O15455 904 aaKnown RBP19.96■□□□□ 0.79
TRAPPC3-207ENST00000497251 ASGR1P07306 291 aa19.96■□□□□ 0.79
TRAPPC3-207ENST00000497251 MX1P20591 662 aa19.96■□□□□ 0.79
TRAPPC3-207ENST00000497251 SLC4A3P48751 1232 aa19.96■□□□□ 0.79
TRAPPC3-207ENST00000497251 PWP2Q15269 919 aaKnown RBP19.96■□□□□ 0.79
TRAPPC3-207ENST00000497251 CCDC144CPQ8IYA2 1237 aa19.96■□□□□ 0.79
TRAPPC3-207ENST00000497251 ANAPC4Q9UJX5 808 aa19.96■□□□□ 0.79
TRAPPC3-207ENST00000497251 Q9Y3F1 56 aa19.96■□□□□ 0.79
TRAPPC3-207ENST00000497251 TTC28Q96AY4 2481 aa19.95■□□□□ 0.78
TRAPPC3-207ENST00000497251 TSPY2A6NKD2 308 aa19.95■□□□□ 0.78
TRAPPC3-207ENST00000497251 ZEB2O60315 1214 aa19.95■□□□□ 0.78
TRAPPC3-207ENST00000497251 IKQ13123 557 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC3-207ENST00000497251 TMEM199Q8N511 208 aa19.95■□□□□ 0.78
TRAPPC3-207ENST00000497251 VTI1AQ96AJ9 217 aa19.95■□□□□ 0.78
TRAPPC3-207ENST00000497251 LENG1Q96BZ8 264 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC3-207ENST00000497251 FGD4Q96M96 766 aa19.95■□□□□ 0.78
TRAPPC3-207ENST00000497251 RNF146Q9NTX7 359 aa19.95■□□□□ 0.78
TRAPPC3-207ENST00000497251 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.95■□□□□ 0.78
TRAPPC3-207ENST00000497251 NOVP48745 357 aa19.94■□□□□ 0.78
TRAPPC3-207ENST00000497251 TNFAIP2Q03169 654 aa19.94■□□□□ 0.78
TRAPPC3-207ENST00000497251 ALX1Q15699 326 aa19.94■□□□□ 0.78
TRAPPC3-207ENST00000497251 IQSEC1Q6DN90 963 aa19.94■□□□□ 0.78
TRAPPC3-207ENST00000497251 MAFAQ8NHW3 353 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC3-207ENST00000497251 EVI5LQ96CN4 794 aa19.94■□□□□ 0.78
TRAPPC3-207ENST00000497251 KATNBL1Q9H079 304 aa19.94■□□□□ 0.78
TRAPPC3-207ENST00000497251 TTYH1Q9H313 450 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC3-207ENST00000497251 A1CFQ9NQ94 594 aaKnown RBP19.94■□□□□ 0.78
TRAPPC3-207ENST00000497251 STX8Q9UNK0 236 aa19.94■□□□□ 0.78
TRAPPC3-207ENST00000497251 ORC4O43929 436 aa19.93■□□□□ 0.78
TRAPPC3-207ENST00000497251 FGRP09769 529 aa19.93■□□□□ 0.78
TRAPPC3-207ENST00000497251 MCCP23508 829 aa19.93■□□□□ 0.78
TRAPPC3-207ENST00000497251 TRERF1Q96PN7 1200 aa19.93■□□□□ 0.78
TRAPPC3-207ENST00000497251 SEC62Q99442 399 aaKnown RBP19.93■□□□□ 0.78
TRAPPC3-207ENST00000497251 HELLSQ9NRZ9 838 aa19.93■□□□□ 0.78
TRAPPC3-207ENST00000497251 ISY1Q9ULR0 285 aaKnown RBP19.93■□□□□ 0.78
TRAPPC3-207ENST00000497251 PCDHB15Q9Y5E8 787 aa19.93■□□□□ 0.78
TRAPPC3-207ENST00000497251 ZNF536O15090 1300 aa19.93■□□□□ 0.78
TRAPPC3-207ENST00000497251 PCP11498 1178 aaKnown RBP19.92■□□□□ 0.78
TRAPPC3-207ENST00000497251 NT5C2P49902 561 aa19.92■□□□□ 0.78
TRAPPC3-207ENST00000497251 EPHB4P54760 987 aa19.92■□□□□ 0.78
TRAPPC3-207ENST00000497251 PSRC1Q6PGN9 363 aaPredicted RBP19.92■□□□□ 0.78
TRAPPC3-207ENST00000497251 FAM126BQ8IXS8 530 aa19.92■□□□□ 0.78
TRAPPC3-207ENST00000497251 DCAF4Q8WV16 495 aa19.92■□□□□ 0.78
TRAPPC3-207ENST00000497251 AP5M1Q9H0R1 490 aa19.92■□□□□ 0.78
TRAPPC3-207ENST00000497251 MTIF3Q9H2K0 278 aaKnown RBP19.92■□□□□ 0.78
TRAPPC3-207ENST00000497251 HOMER2Q9NSB8 354 aa19.92■□□□□ 0.78
TRAPPC3-207ENST00000497251 MYO9BQ13459 2157 aa19.92■□□□□ 0.78
TRAPPC3-207ENST00000497251 MYADML2A6NDP7 307 aa19.91■□□□□ 0.78
TRAPPC3-207ENST00000497251 FOSL2P15408 326 aa19.91■□□□□ 0.78
TRAPPC3-207ENST00000497251 CNTN2Q02246 1040 aa19.91■□□□□ 0.78
TRAPPC3-207ENST00000497251 SLC43A3Q8NBI5 491 aa19.91■□□□□ 0.78
TRAPPC3-207ENST00000497251 AGBL1Q96MI9 1066 aa19.91■□□□□ 0.78
TRAPPC3-207ENST00000497251 COL25A1Q9BXS0 654 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC3-207ENST00000497251 VTA1Q9NP79 307 aa19.91■□□□□ 0.78
TRAPPC3-207ENST00000497251 TCP11L1Q9NUJ3 509 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms