RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 TRIM47Q96LD4 638 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 PARK7Q99497 189 aaKnown RBP7.12□□□□□ -1.27
HMGCL-206ENST00000496907 CDX2Q99626 313 aaPredicted RBP7.12□□□□□ -1.27
HMGCL-206ENST00000496907 GDF15Q99988 308 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 VCPKMTQ9H867 229 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 KAT14Q9H8E8 782 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 SRRDQ9UH36 339 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 CPA4Q9UI42 421 aa7.12□□□□□ -1.27
HMGCL-206ENST00000496907 CCDC196A0A1B0GTZ2 297 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 B4E1Z4 1266 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 BTBD19C9JJ37 291 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 SYN1P17600 705 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 HOXD10P28358 340 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 SMARCA1P28370 1054 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 KIF5BP33176 963 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 GUCY1A2P33402 732 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 COPB2P35606 906 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 RCAN1P53805 252 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 IRX3P78415 501 aaPredicted RBP7.11□□□□□ -1.27
HMGCL-206ENST00000496907 MTMR2Q13614 643 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 RRP1BQ14684 758 aaKnown RBP7.11□□□□□ -1.27
HMGCL-206ENST00000496907 WTAPQ15007 396 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 FAM47AQ5JRC9 791 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 IFIT1BQ5T764 474 aaKnown RBP7.11□□□□□ -1.27
HMGCL-206ENST00000496907 LBX2Q6XYB7 198 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 GADL1Q6ZQY3 521 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 CATIPQ7Z7H3 387 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 TBC1D10CQ8IV04 446 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 TDHQ8IZJ6 230 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 STK11IPQ8N1F8 1099 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 MB21D1Q8N884 522 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 PRPF38AQ8NAV1 312 aaKnown RBP7.11□□□□□ -1.27
HMGCL-206ENST00000496907 DCAF4Q8WV16 495 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 KHSRPQ92945 711 aaKnown RBP eCLIP7.11□□□□□ -1.27
HMGCL-206ENST00000496907 IL17RAQ96F46 866 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 CEP95Q96GE4 821 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 GMCL1Q96IK5 515 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 LZTS2Q9BRK4 669 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 MAF1Q9H063 256 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 IL25Q9H293 177 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 ALDH8A1Q9H2A2 487 aaPredicted RBP7.11□□□□□ -1.27
HMGCL-206ENST00000496907 FEM1BQ9UK73 627 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 CTDP1Q9Y5B0 961 aaPredicted RBP7.11□□□□□ -1.27
HMGCL-206ENST00000496907 CYP46A1Q9Y6A2 500 aa7.11□□□□□ -1.27
HMGCL-206ENST00000496907 BAHCC1Q9P281 2608 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 ALPK3Q96L96 1907 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 CCDC69A6NI79 296 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 PDHXO00330 501 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 PRC1O43663 620 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 TFRCP02786 760 aaKnown RBP7.1□□□□□ -1.27
HMGCL-206ENST00000496907 BMP3P12645 472 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 CTGFP29279 349 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 SLC1A4P43007 532 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 HMGCS2P54868 508 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 CCNA1P78396 465 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 EXOSC10Q01780 885 aaKnown RBP7.1□□□□□ -1.27
HMGCL-206ENST00000496907 ASPRV1Q53RT3 343 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 TMEM67Q5HYA8 995 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 SLFN13Q68D06 897 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 ADGRD1Q6QNK2 874 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 CATSPERGQ6ZRH7 1159 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 RUFY3Q7L099 469 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 SIAH1Q8IUQ4 282 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 C7orf61Q8IZ16 206 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 SMCR8Q8TEV9 937 aaPredicted RBP7.1□□□□□ -1.27
HMGCL-206ENST00000496907 MYLIPQ8WY64 445 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 TMEM47Q9BQJ4 181 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.1□□□□□ -1.27
HMGCL-206ENST00000496907 UNC93B1Q9H1C4 597 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 IL17RBQ9NRM6 502 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 EMILIN3Q9NT22 766 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 RABGAP1Q9Y3P9 1069 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 SNX14Q9Y5W7 946 aa7.1□□□□□ -1.27
HMGCL-206ENST00000496907 MGAMO43451 1857 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 TNKSO95271 1327 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 A0A1W2PRG0 241 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 DHX16O60231 1041 aaKnown RBP7.09□□□□□ -1.27
HMGCL-206ENST00000496907 ZBED4O75132 1171 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 DDAH1O94760 285 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 SGPL1O95470 568 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 BMP8BP34820 402 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 MAGEA10P43363 369 aaPredicted RBP7.09□□□□□ -1.27
HMGCL-206ENST00000496907 RBM25P49756 843 aaKnown RBP7.09□□□□□ -1.27
HMGCL-206ENST00000496907 OAZ1P54368 228 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 JAG1P78504 1218 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 PRKCZQ05513 592 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 C8orf34Q49A92 452 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 GPAT2Q6NUI2 795 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 TRAF7Q6Q0C0 670 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 C17orf99Q6UX52 265 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 TMEM92Q6UXU6 159 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 NFXL1Q6ZNB6 911 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 SGMS1Q86VZ5 419 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 TEX2Q8IWB9 1127 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 CCAR1Q8IX12 1150 aaKnown RBP7.09□□□□□ -1.27
HMGCL-206ENST00000496907 MB21D2Q8IYB1 491 aaPredicted RBP7.09□□□□□ -1.27
HMGCL-206ENST00000496907 PNMA1Q8ND90 353 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 ACER1Q8TDN7 264 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 IGDCC4Q8TDY8 1250 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 ADAMTS19Q8TE59 1207 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms