RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 PPP2R5EQ16537 467 aa9.82□□□□□ -0.84
TARDBP-210ENST00000496840 HEATR6Q6AI08 1181 aaKnown RBP9.82□□□□□ -0.84
TARDBP-210ENST00000496840 GALNT18Q6P9A2 607 aa9.82□□□□□ -0.84
TARDBP-210ENST00000496840 SLCO6A1Q86UG4 719 aa9.82□□□□□ -0.84
TARDBP-210ENST00000496840 GBP3Q9H0R5 595 aa9.82□□□□□ -0.84
TARDBP-210ENST00000496840 PCDHB10Q9UN67 800 aa9.82□□□□□ -0.84
TARDBP-210ENST00000496840 GPR55Q9Y2T6 319 aaPredicted RBP9.82□□□□□ -0.84
TARDBP-210ENST00000496840 A0A1W2PQ45 241 aaPredicted RBP9.81□□□□□ -0.84
TARDBP-210ENST00000496840 A0A1W2PQY0 241 aa9.81□□□□□ -0.84
TARDBP-210ENST00000496840 WTIPA6NIX2 430 aaPredicted RBP9.81□□□□□ -0.84
TARDBP-210ENST00000496840 DBX1A6NMT0 343 aa9.81□□□□□ -0.84
TARDBP-210ENST00000496840 HSF5Q4G112 596 aaPredicted RBP9.81□□□□□ -0.84
TARDBP-210ENST00000496840 NOL6Q9H6R4 1146 aaKnown RBP9.81□□□□□ -0.84
TARDBP-210ENST00000496840 PEX10O60683 326 aa9.8□□□□□ -0.84
TARDBP-210ENST00000496840 GSTM1P09488 218 aa9.8□□□□□ -0.84
TARDBP-210ENST00000496840 PNLIPP16233 465 aa9.8□□□□□ -0.84
TARDBP-210ENST00000496840 RBM25P49756 843 aaKnown RBP9.8□□□□□ -0.84
TARDBP-210ENST00000496840 JAG1P78504 1218 aa9.8□□□□□ -0.84
TARDBP-210ENST00000496840 POU4F1Q01851 419 aa9.8□□□□□ -0.84
TARDBP-210ENST00000496840 TMEM52Q8NDY8 209 aa9.8□□□□□ -0.84
TARDBP-210ENST00000496840 ANAPC16Q96DE5 110 aa9.8□□□□□ -0.84
TARDBP-210ENST00000496840 KRTAP4-9Q9BYQ8 210 aa9.8□□□□□ -0.84
TARDBP-210ENST00000496840 ZNF552Q9H707 407 aaPredicted RBP9.8□□□□□ -0.84
TARDBP-210ENST00000496840 TAF6LQ9Y6J9 622 aa9.8□□□□□ -0.84
TARDBP-210ENST00000496840 FGF10O15520 208 aaPredicted RBP9.79□□□□□ -0.84
TARDBP-210ENST00000496840 KRT1P04264 644 aa9.79□□□□□ -0.84
TARDBP-210ENST00000496840 EPHX1P07099 455 aa9.79□□□□□ -0.84
TARDBP-210ENST00000496840 VHLLQ6RSH7 139 aa9.79□□□□□ -0.84
TARDBP-210ENST00000496840 CYP2R1Q6VVX0 501 aa9.79□□□□□ -0.84
TARDBP-210ENST00000496840 PLCD4Q9BRC7 762 aa9.79□□□□□ -0.84
TARDBP-210ENST00000496840 OR14I1A6ND48 311 aa9.78□□□□□ -0.84
TARDBP-210ENST00000496840 HRKO00198 91 aa9.78□□□□□ -0.84
TARDBP-210ENST00000496840 PPM1BO75688 479 aa9.78□□□□□ -0.84
TARDBP-210ENST00000496840 MED14OSP0DP75 135 aa9.78□□□□□ -0.84
TARDBP-210ENST00000496840 GLDCP23378 1020 aa9.78□□□□□ -0.84
TARDBP-210ENST00000496840 PDE6BP35913 854 aa9.78□□□□□ -0.84
TARDBP-210ENST00000496840 RAP1GAPP47736 663 aa9.78□□□□□ -0.84
TARDBP-210ENST00000496840 GALK1P51570 392 aa9.78□□□□□ -0.84
TARDBP-210ENST00000496840 RCC1LQ96I51 464 aaKnown RBP9.78□□□□□ -0.84
TARDBP-210ENST00000496840 FCRL3Q96P31 734 aaPredicted RBP9.78□□□□□ -0.84
TARDBP-210ENST00000496840 TINF2Q9BSI4 451 aa9.78□□□□□ -0.84
TARDBP-210ENST00000496840 SUSD2Q9UGT4 822 aa9.78□□□□□ -0.84
TARDBP-210ENST00000496840 NFIBO00712 420 aa9.77□□□□□ -0.85
TARDBP-210ENST00000496840 HLA-DQA1Q5Y7H0 255 aa9.77□□□□□ -0.85
TARDBP-210ENST00000496840 KIAA1211LQ6NV74 962 aa9.77□□□□□ -0.85
TARDBP-210ENST00000496840 SIRT2Q8IXJ6 389 aa9.77□□□□□ -0.85
TARDBP-210ENST00000496840 NAT16Q8N8M0 369 aa9.77□□□□□ -0.85
TARDBP-210ENST00000496840 ZDHHC15Q96MV8 337 aa9.77□□□□□ -0.85
TARDBP-210ENST00000496840 KCNK12Q9HB15 430 aa9.77□□□□□ -0.85
TARDBP-210ENST00000496840 IGSF5Q9NSI5 407 aa9.77□□□□□ -0.85
TARDBP-210ENST00000496840 PODXL2Q9NZ53 605 aa9.77□□□□□ -0.85
TARDBP-210ENST00000496840 ACSL6Q9UKU0 697 aa9.77□□□□□ -0.85
TARDBP-210ENST00000496840 ANKRD34BA5PLL1 514 aa9.76□□□□□ -0.85
TARDBP-210ENST00000496840 SEMA7AO75326 666 aa9.76□□□□□ -0.85
TARDBP-210ENST00000496840 SSBP05455 408 aaKnown RBP eCLIP9.76□□□□□ -0.85
TARDBP-210ENST00000496840 TMEM253P0C7T8 217 aa9.76□□□□□ -0.85
TARDBP-210ENST00000496840 ZNF143P52747 638 aaPredicted RBP9.76□□□□□ -0.85
TARDBP-210ENST00000496840 ERVFRD-1P60508 538 aa9.76□□□□□ -0.85
TARDBP-210ENST00000496840 FZD5Q13467 585 aa9.76□□□□□ -0.85
TARDBP-210ENST00000496840 LAPTM5Q13571 262 aa9.76□□□□□ -0.85
TARDBP-210ENST00000496840 NCAPHQ15003 741 aa9.76□□□□□ -0.85
TARDBP-210ENST00000496840 TNNI3KQ59H18 835 aa9.76□□□□□ -0.85
TARDBP-210ENST00000496840 ADGRF1Q5T601 910 aa9.76□□□□□ -0.85
TARDBP-210ENST00000496840 ADAT2Q7Z6V5 191 aaKnown RBP9.76□□□□□ -0.85
TARDBP-210ENST00000496840 ZNF605Q86T29 641 aa9.76□□□□□ -0.85
TARDBP-210ENST00000496840 CILP2Q8IUL8 1156 aa9.76□□□□□ -0.85
TARDBP-210ENST00000496840 ARHGEF39Q8N4T4 335 aa9.76□□□□□ -0.85
TARDBP-210ENST00000496840 ADCY4Q8NFM4 1077 aa9.76□□□□□ -0.85
TARDBP-210ENST00000496840 MCOLN1Q9GZU1 580 aa9.76□□□□□ -0.85
TARDBP-210ENST00000496840 CD3EP07766 207 aa9.75□□□□□ -0.85
TARDBP-210ENST00000496840 C1QTNF9P0C862 333 aa9.75□□□□□ -0.85
TARDBP-210ENST00000496840 GRB10Q13322 594 aa9.75□□□□□ -0.85
TARDBP-210ENST00000496840 PPP2R5DQ14738 602 aa9.75□□□□□ -0.85
TARDBP-210ENST00000496840 FGD4Q96M96 766 aa9.75□□□□□ -0.85
TARDBP-210ENST00000496840 JMJD8Q96S16 334 aa9.75□□□□□ -0.85
TARDBP-210ENST00000496840 CGGBP1Q9UFW8 167 aaPredicted RBP9.75□□□□□ -0.85
TARDBP-210ENST00000496840 MYOCOSA0A1B0GUC4 107 aa9.74□□□□□ -0.85
TARDBP-210ENST00000496840 SMAD7O15105 426 aaKnown RBP9.74□□□□□ -0.85
TARDBP-210ENST00000496840 FGRP09769 529 aa9.74□□□□□ -0.85
TARDBP-210ENST00000496840 NAT2P11245 290 aa9.74□□□□□ -0.85
TARDBP-210ENST00000496840 IFNGR1P15260 489 aa9.74□□□□□ -0.85
TARDBP-210ENST00000496840 ARL4AP40617 200 aa9.74□□□□□ -0.85
TARDBP-210ENST00000496840 RCSD1Q6JBY9 416 aa9.74□□□□□ -0.85
TARDBP-210ENST00000496840 ZNF513Q8N8E2 541 aaPredicted RBP9.74□□□□□ -0.85
TARDBP-210ENST00000496840 KCNN1Q92952 543 aa9.74□□□□□ -0.85
TARDBP-210ENST00000496840 PTCHD1Q96NR3 888 aa9.74□□□□□ -0.85
TARDBP-210ENST00000496840 TEX51A0A1B0GUA7 166 aa9.73□□□□□ -0.85
TARDBP-210ENST00000496840 ETV2O00321 342 aaPredicted RBP9.73□□□□□ -0.85
TARDBP-210ENST00000496840 AURKAO14965 403 aa9.73□□□□□ -0.85
TARDBP-210ENST00000496840 PRKCAP17252 672 aa9.73□□□□□ -0.85
TARDBP-210ENST00000496840 ARID5AQ03989 594 aa9.73□□□□□ -0.85
TARDBP-210ENST00000496840 EEF1DP3Q658K8 133 aa9.73□□□□□ -0.85
TARDBP-210ENST00000496840 ANKLE2Q86XL3 938 aa9.73□□□□□ -0.85
TARDBP-210ENST00000496840 SLC43A3Q8NBI5 491 aa9.73□□□□□ -0.85
TARDBP-210ENST00000496840 NUP43Q8NFH3 380 aa9.73□□□□□ -0.85
TARDBP-210ENST00000496840 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.73□□□□□ -0.853e-6■□□□□ 10.1
TARDBP-210ENST00000496840 CD320Q9NPF0 282 aa9.73□□□□□ -0.85
TARDBP-210ENST00000496840 ACTR10Q9NZ32 417 aa9.73□□□□□ -0.85
TARDBP-210ENST00000496840 IMPACTQ9P2X3 320 aa9.73□□□□□ -0.85
TARDBP-210ENST00000496840 PRKAG3Q9UGI9 489 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms