RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ORC2Q13416 577 aaPredicted RBP14.75□□□□□ -0.05
GARNL3-220ENST00000496711 PTPN21Q16825 1174 aa14.75□□□□□ -0.05
GARNL3-220ENST00000496711 NEK8Q86SG6 692 aa14.75□□□□□ -0.05
GARNL3-220ENST00000496711 REXO1Q8N1G1 1221 aaKnown RBP14.75□□□□□ -0.05
GARNL3-220ENST00000496711 TSC1Q92574 1164 aa14.75□□□□□ -0.05
GARNL3-220ENST00000496711 CCSER1Q9C0I3 900 aa14.75□□□□□ -0.05
GARNL3-220ENST00000496711 VAT1LQ9HCJ6 419 aa14.75□□□□□ -0.05
GARNL3-220ENST00000496711 RPN1P04843 607 aaKnown RBP14.74□□□□□ -0.05
GARNL3-220ENST00000496711 SHMT1P34896 483 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 UBA7P41226 1012 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 NR1I3Q14994 352 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 ZNF658Q5TYW1 1059 aaPredicted RBP14.74□□□□□ -0.05
GARNL3-220ENST00000496711 RRAGBQ5VZM2 374 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 ZNF772Q68DY9 489 aaPredicted RBP14.74□□□□□ -0.05
GARNL3-220ENST00000496711 PODNQ7Z5L7 613 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 FCHSD1Q86WN1 690 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 AK8Q96MA6 479 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 CTAGE1Q96RT6 745 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 UBA5Q9GZZ9 404 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 PDCL3Q9H2J4 239 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 PSME4Q14997 1843 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 PP2D1A8MPX8 630 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 CCNT1O60563 726 aaKnown RBP14.74□□□□□ -0.05
GARNL3-220ENST00000496711 MYL1P05976 194 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 CRKP46108 304 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 EIF6P56537 245 aaKnown RBP14.74□□□□□ -0.05
GARNL3-220ENST00000496711 LETM2Q2VYF4 491 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 NAALADL2Q58DX5 795 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 MSL1Q68DK7 614 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 APOBEC3HQ6NTF7 200 aaKnown RBP14.74□□□□□ -0.05
GARNL3-220ENST00000496711 APTXQ7Z2E3 356 aaKnown RBP14.74□□□□□ -0.05
GARNL3-220ENST00000496711 CLEC10AQ8IUN9 316 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 ZNF622Q969S3 477 aaKnown RBP eCLIP14.74□□□□□ -0.05
GARNL3-220ENST00000496711 EHD4Q9H223 541 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 DBNDD1Q9H9R9 158 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 RWDD2AQ9UIY3 292 aa14.74□□□□□ -0.05
GARNL3-220ENST00000496711 ARHGAP6O43182 974 aa14.73□□□□□ -0.05
GARNL3-220ENST00000496711 GOLGA8FQ08AF8 430 aa14.73□□□□□ -0.05
GARNL3-220ENST00000496711 GOLGA8DPQ0D2H9 430 aa14.73□□□□□ -0.05
GARNL3-220ENST00000496711 PAK1Q13153 545 aa14.73□□□□□ -0.05
GARNL3-220ENST00000496711 PPP1R18Q6NYC8 613 aa14.73□□□□□ -0.05
GARNL3-220ENST00000496711 C2CD5Q86YS7 1000 aa14.73□□□□□ -0.05
GARNL3-220ENST00000496711 TMEM139Q8IV31 216 aa14.73□□□□□ -0.05
GARNL3-220ENST00000496711 ZNF710Q8N1W2 664 aa14.73□□□□□ -0.05
GARNL3-220ENST00000496711 KIF18AQ8NI77 898 aa14.73□□□□□ -0.05
GARNL3-220ENST00000496711 MAGEF1Q9HAY2 307 aa14.73□□□□□ -0.05
GARNL3-220ENST00000496711 MYH7BA7E2Y1 1941 aa14.73□□□□□ -0.05
GARNL3-220ENST00000496711 TUBB4AP04350 444 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 ADCY7P51828 1080 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 FKBP1AP62942 108 aaKnown RBP14.72□□□□□ -0.05
GARNL3-220ENST00000496711 ZNF543Q08ER8 600 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 FILIP1LQ4L180 1135 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 PPP4R3BQ5MIZ7 849 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 STYK1Q6J9G0 422 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 TC2NQ8N9U0 490 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 TBCKQ8TEA7 893 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 ZDHHC15Q96MV8 337 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 CUEDC2Q9H467 287 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 ADD3Q9UEY8 706 aaKnown RBP14.72□□□□□ -0.05
GARNL3-220ENST00000496711 NFIAQ12857 509 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 SEMA3FQ13275 785 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 KCNB1Q14721 858 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 SYCP1Q15431 976 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 JAKMIP3Q5VZ66 844 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 CABP7Q86V35 215 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 BAG1Q99933 345 aaPredicted RBP14.72□□□□□ -0.05
GARNL3-220ENST00000496711 GPCPD1Q9NPB8 672 aa14.72□□□□□ -0.05
GARNL3-220ENST00000496711 BIN2Q9UBW5 565 aaPredicted RBP14.72□□□□□ -0.05
GARNL3-220ENST00000496711 MPHOSPH10O00566 681 aaKnown RBP14.71□□□□□ -0.05
GARNL3-220ENST00000496711 SPAG1Q07617 926 aa14.71□□□□□ -0.05
GARNL3-220ENST00000496711 STRIP1Q5VSL9 837 aa14.71□□□□□ -0.05
GARNL3-220ENST00000496711 NELFBQ8WX92 580 aa14.71□□□□□ -0.05
GARNL3-220ENST00000496711 KBTBD4Q9NVX7 518 aa14.71□□□□□ -0.05
GARNL3-220ENST00000496711 TMEM260Q9NX78 707 aa14.71□□□□□ -0.05
GARNL3-220ENST00000496711 GDAQ9Y2T3 454 aa14.71□□□□□ -0.05
GARNL3-220ENST00000496711 H0YIN7 160 aa14.7□□□□□ -0.06
GARNL3-220ENST00000496711 ZSCAN12O43309 604 aa14.7□□□□□ -0.06
GARNL3-220ENST00000496711 ECE2O60344 883 aa14.7□□□□□ -0.06
GARNL3-220ENST00000496711 STX10O60499 249 aa14.7□□□□□ -0.06
GARNL3-220ENST00000496711 PBX1P40424 430 aa14.7□□□□□ -0.06
GARNL3-220ENST00000496711 GPATCH4Q5T3I0 446 aaKnown RBP14.7□□□□□ -0.06
GARNL3-220ENST00000496711 COA7Q96BR5 231 aa14.7□□□□□ -0.06
GARNL3-220ENST00000496711 CCDC17Q96LX7 622 aa14.7□□□□□ -0.06
GARNL3-220ENST00000496711 MRIQ9BWK5 157 aa14.7□□□□□ -0.06
GARNL3-220ENST00000496711 LIMA1Q9UHB6 759 aaKnown RBP14.7□□□□□ -0.06
GARNL3-220ENST00000496711 PNMA6FA0A0J9YX94 578 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 TEX33O43247 280 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 PLCG1P19174 1290 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 ADKP55263 362 aaKnown RBP14.69□□□□□ -0.06
GARNL3-220ENST00000496711 HDLBPQ00341 1268 aaKnown RBP14.69□□□□□ -0.06
GARNL3-220ENST00000496711 CCDC96Q2M329 555 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 POTEDQ86YR6 584 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 KIAA0825Q8IV33 1275 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 ADGRF4Q8IZF3 695 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 ANKRD20A12PQ8NF67 263 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 ANKRD7Q92527 254 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 DHX36Q9H2U1 1008 aaKnown RBP14.69□□□□□ -0.06
GARNL3-220ENST00000496711 JMJD4Q9H9V9 463 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 ITIH6Q6UXX5 1313 aa14.69□□□□□ -0.06
GARNL3-220ENST00000496711 AKR1B15C9JRZ8 316 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms