RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 RASGRP2Q7LDG7 609 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 MAPKAPK5Q8IW41 473 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 BRIP1Q9BX63 1249 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 NUCKS1Q9H1E3 243 aaKnown RBP7.07□□□□□ -1.28
SSBP1-213ENST00000496622 LY9Q9HBG7 655 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 MED4Q9NPJ6 270 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 ORC3Q9UBD5 711 aaPredicted RBP7.07□□□□□ -1.28
SSBP1-213ENST00000496622 RSPH14Q9UHP6 348 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 PARP3Q9Y6F1 533 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 LY75O60449 1722 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 BCORQ6W2J9 1755 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 SH2B2O14492 632 aaPredicted RBP7.07□□□□□ -1.28
SSBP1-213ENST00000496622 CALRP27797 417 aaKnown RBP7.07□□□□□ -1.28
SSBP1-213ENST00000496622 SLC15A2Q16348 729 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 CAMK4Q16566 473 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 SMARCC2Q8TAQ2 1214 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 ZNF274Q96GC6 653 aaPredicted RBP7.07□□□□□ -1.28
SSBP1-213ENST00000496622 ARPC5LQ9BPX5 153 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 LEMD3Q9Y2U8 911 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 C4AP0C0L4 1744 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 TAF1LQ8IZX4 1826 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 CENPFP49454 3210 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 CAND2O75155 1236 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 BBOX1O75936 387 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 GUCY2CP25092 1073 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 METAP2P50579 478 aaKnown RBP eCLIP7.06□□□□□ -1.28
SSBP1-213ENST00000496622 CACNB3P54284 484 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 HTRA3P83110 453 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 ARID5BQ14865 1188 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 CERS5Q8N5B7 392 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 SLC12A7Q9Y666 1083 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 SCN7AQ01118 1682 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 CICQ96RK0 1608 aaPredicted RBP7.06□□□□□ -1.28
SSBP1-213ENST00000496622 TNKSO95271 1327 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 A0A087WWV3 80 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 FSD2A1L4K1 749 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 FAM187AA6NFU0 413 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 KIF28PB7ZC32 967 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 ECEL1O95672 775 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 VEGFAP15692 232 aaPredicted RBP7.06□□□□□ -1.28
SSBP1-213ENST00000496622 HOXA10P31260 410 aaPredicted RBP7.06□□□□□ -1.28
SSBP1-213ENST00000496622 ABCD1P33897 745 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 PICALMQ13492 652 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 SKOR2Q2VWA4 1001 aaPredicted RBP7.06□□□□□ -1.28
SSBP1-213ENST00000496622 LONRF3Q496Y0 759 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 ZNF804AQ7Z570 1209 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 MNS1Q8NEH6 495 aa7.06□□□□□ -1.28
SSBP1-213ENST00000496622 ERCC4Q92889 916 aaPredicted RBP7.06□□□□□ -1.28
SSBP1-213ENST00000496622 SALL1Q9NSC2 1324 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 KLRG2A4D1S0 409 aaPredicted RBP7.05□□□□□ -1.28
SSBP1-213ENST00000496622 ERICH4A6NGS2 130 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 ST8SIA5O15466 376 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 ZBTB43O43298 467 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 ALDH1A1P00352 501 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 LIG1P18858 919 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 USP5P45974 858 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 EVCP57679 992 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 PPP2R5AQ15172 486 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 ALX1Q15699 326 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 C11orf91Q3C1V1 193 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 GIMAP6Q6P9H5 292 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 DPP8Q6V1X1 898 aaPredicted RBP7.05□□□□□ -1.28
SSBP1-213ENST00000496622 C2CD5Q86YS7 1000 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 ENAHQ8N8S7 591 aaPredicted RBP7.05□□□□□ -1.28
SSBP1-213ENST00000496622 USP28Q96RU2 1077 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 ZC3H12CQ9C0D7 883 aaKnown RBP7.05□□□□□ -1.28
SSBP1-213ENST00000496622 GRPEL1Q9HAV7 217 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 BRMS1Q9HCU9 246 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 ATP6V0A2Q9Y487 856 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 SYNGAP1Q96PV0 1343 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 USP17L3A6NCW0 530 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 USP17L4A6NCW7 530 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 CCDC69A6NI79 296 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 GOLGA8AA7E2F4 631 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 C21orf2O43822 256 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 ZBTB7AO95365 584 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 FAM163BP0C2L3 166 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 GNAT2P19087 354 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 PDCP20941 246 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 BTDP43251 543 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 RESTQ13127 1097 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 ZFYVE27Q5T4F4 411 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 USP17L1Q7RTZ2 530 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 KIAA0825Q8IV33 1275 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 STAG1Q8WVM7 1258 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 UBAC1Q9BSL1 405 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 SLC26A6Q9BXS9 759 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 RBSNQ9H1K0 784 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 RANBP17Q9H2T7 1088 aaKnown RBP7.05□□□□□ -1.28
SSBP1-213ENST00000496622 CPVLQ9H3G5 476 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 KCNJ14Q9UNX9 436 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 ZNF232Q9UNY5 417 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 SCAF8Q9UPN6 1271 aaKnown RBP7.05□□□□□ -1.28
SSBP1-213ENST00000496622 CTDP1Q9Y5B0 961 aaPredicted RBP7.05□□□□□ -1.28
SSBP1-213ENST00000496622 BAZ2BQ9UIF8 2168 aaKnown RBP7.05□□□□□ -1.28
SSBP1-213ENST00000496622 TCHHQ07283 1943 aa7.05□□□□□ -1.28
SSBP1-213ENST00000496622 UBR3Q6ZT12 1888 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 RGS20O76081 388 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 ERCC3P19447 782 aa7.04□□□□□ -1.28
SSBP1-213ENST00000496622 WTAPQ15007 396 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms