RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 PFKFB1P16118 471 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 TPD52P55327 224 aaPredicted RBP14.46□□□□□ -0.09
PTPRF-215ENST00000496447 ASPRV1Q53RT3 343 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 TYW1BQ6NUM6 668 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 ZNF335Q9H4Z2 1342 aaPredicted RBP14.46□□□□□ -0.09
PTPRF-215ENST00000496447 N4BP1O75113 896 aaKnown RBP14.46□□□□□ -0.09
PTPRF-215ENST00000496447 GDF11O95390 407 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 TMEM191BP0C7N4 346 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 STAT1P42224 750 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 ZNF75DP51815 510 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 ADALQ6DHV7 355 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 CCDC89Q8N998 374 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 ADCY9O60503 1353 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 ARHGEF5Q12774 1597 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 ANKARQ7Z5J8 1434 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 TFDP1Q14186 410 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 HSPA1LP34931 641 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 IFRD2Q12894 506 aaPredicted RBP14.46□□□□□ -0.09
PTPRF-215ENST00000496447 RPS6KA1Q15418 735 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 AP1ARQ63HQ0 302 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 CCDC105Q8IYK2 499 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 U2AF1L4Q8WU68 220 aaKnown RBP14.46□□□□□ -0.09
PTPRF-215ENST00000496447 ANKFY1Q9P2R3 1169 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 ADGBQ8N7X0 1667 aa14.46□□□□□ -0.09
PTPRF-215ENST00000496447 RNF123Q5XPI4 1314 aa14.46□□□□□ -0.1
PTPRF-215ENST00000496447 ROBO2Q9HCK4 1378 aa14.46□□□□□ -0.1
PTPRF-215ENST00000496447 ARMCX5Q6P1M9 558 aa14.46□□□□□ -0.1
PTPRF-215ENST00000496447 RPAINQ86UA6 219 aa14.46□□□□□ -0.1
PTPRF-215ENST00000496447 IMPACTQ9P2X3 320 aa14.46□□□□□ -0.1
PTPRF-215ENST00000496447 ERBB3P21860 1342 aa14.46□□□□□ -0.1
PTPRF-215ENST00000496447 GADD45BO75293 160 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-215ENST00000496447 DLATP10515 647 aaKnown RBP14.45□□□□□ -0.1
PTPRF-215ENST00000496447 TAOK1Q7L7X3 1001 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 RSPH3Q86UC2 560 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 RPS6KC1Q96S38 1066 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 HESX1Q9UBX0 185 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 FAM184BQ9ULE4 1060 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 USP6P35125 1406 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 KLHL7Q8IXQ5 586 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 LMNTD2Q8IXW0 634 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 IFT20Q8IY31 132 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 MAIP1Q8WWC4 291 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 ADD3Q9UEY8 706 aaKnown RBP14.45□□□□□ -0.1
PTPRF-215ENST00000496447 ARMCX3Q9UH62 379 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-215ENST00000496447 ATP7BP35670 1465 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 FAM170AA1A519 330 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 LACTBP83111 547 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-215ENST00000496447 CYP4A11Q02928 519 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 MTX1Q13505 466 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 SND1Q7KZF4 910 aaKnown RBP eCLIP14.45□□□□□ -0.1
PTPRF-215ENST00000496447 SLF1Q9BQI6 1058 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 ERVV-1B6SEH8 477 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 DYNLL1P63167 89 aaKnown RBP14.45□□□□□ -0.1
PTPRF-215ENST00000496447 PPP2R5CQ13362 524 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 KRT81Q14533 505 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 SCYL2Q6P3W7 929 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 KCTD1Q719H9 257 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 VPS52Q8N1B4 723 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 AFAP1L2Q8N4X5 818 aa14.45□□□□□ -0.1
PTPRF-215ENST00000496447 SEPT9Q9UHD8 586 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-215ENST00000496447 DBNLQ9UJU6 430 aaKnown RBP14.45□□□□□ -0.1
PTPRF-215ENST00000496447 GSPT1P15170 499 aaKnown RBP14.44□□□□□ -0.1
PTPRF-215ENST00000496447 NPR1P16066 1061 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 ABI1Q8IZP0 508 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 KANSL2Q9H9L4 492 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 SRP68Q9UHB9 627 aaKnown RBP14.44□□□□□ -0.1
PTPRF-215ENST00000496447 TSKSQ9UJT2 592 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 STAM2O75886 525 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 OATP04181 439 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 UBXN2AP68543 259 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 SEPT6Q14141 434 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 NLRP10Q86W26 655 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 TRIM50Q86XT4 487 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 PSMB7Q99436 277 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 APOL6Q9BWW8 343 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 RABGAP1Q9Y3P9 1069 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 KCNJ18B7U540 433 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 KCNJ12Q14500 433 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 SEPT14Q6ZU15 432 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 IFIH1Q9BYX4 1025 aaKnown RBP14.44□□□□□ -0.1
PTPRF-215ENST00000496447 PALD1Q9ULE6 856 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 ABT1Q9ULW3 272 aaKnown RBP14.44□□□□□ -0.1
PTPRF-215ENST00000496447 PRAMEF22A3QJZ6 481 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 BTBD18B2RXH4 712 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 VIMP08670 466 aaKnown RBP14.44□□□□□ -0.1
PTPRF-215ENST00000496447 HPDP32754 393 aaPredicted RBP14.44□□□□□ -0.1
PTPRF-215ENST00000496447 FYB2Q5VWT5 728 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 INTS8Q75QN2 995 aaKnown RBP14.44□□□□□ -0.1
PTPRF-215ENST00000496447 ZSWIM6Q9HCJ5 1215 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 RTEL1Q9NZ71 1219 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 TPCN1Q9ULQ1 816 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 NDUFAB1O14561 156 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 ARHGAP6O43182 974 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 BSPRYQ5W0U4 402 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 CIAPIN1Q6FI81 312 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 SRGAP1Q7Z6B7 1085 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 RTKN2Q8IZC4 609 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 ATP6V0A1Q93050 837 aa14.44□□□□□ -0.1
PTPRF-215ENST00000496447 KDM5CP41229 1560 aa14.43□□□□□ -0.1
PTPRF-215ENST00000496447 MORC3Q14149 939 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms