RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 BADQ92934 168 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 TRIM43Q96BQ3 446 aaPredicted RBP17.03■□□□□ 0.32
CXCL12-208ENST00000496375 GMCL1Q96IK5 515 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 CCDC136Q96JN2 1154 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 INCENPQ9NQS7 918 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 HOMER2Q9NSB8 354 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 MTMR10Q9NXD2 777 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 STX8Q9UNK0 236 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 GTF3C3Q9Y5Q9 886 aa17.03■□□□□ 0.32
CXCL12-208ENST00000496375 SYNRGQ9UMZ2 1314 aa17.02■□□□□ 0.32
CXCL12-208ENST00000496375 FDX1P10109 184 aa17.02■□□□□ 0.32
CXCL12-208ENST00000496375 MCCP23508 829 aa17.02■□□□□ 0.32
CXCL12-208ENST00000496375 PPP4R3BQ5MIZ7 849 aa17.02■□□□□ 0.32
CXCL12-208ENST00000496375 VPS53Q5VIR6 699 aa17.02■□□□□ 0.32
CXCL12-208ENST00000496375 FAM160B2Q86V87 743 aa17.02■□□□□ 0.32
CXCL12-208ENST00000496375 CHURC1Q8WUH1 139 aa17.02■□□□□ 0.32
CXCL12-208ENST00000496375 STAG1Q8WVM7 1258 aa17.02■□□□□ 0.32
CXCL12-208ENST00000496375 FGD4Q96M96 766 aa17.02■□□□□ 0.32
CXCL12-208ENST00000496375 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.02■□□□□ 0.32
CXCL12-208ENST00000496375 NMT2O60551 498 aa17.01■□□□□ 0.31
CXCL12-208ENST00000496375 ACLYP53396 1101 aa17.01■□□□□ 0.31
CXCL12-208ENST00000496375 ACVR2BQ13705 512 aa17.01■□□□□ 0.31
CXCL12-208ENST00000496375 TTC22Q5TAA0 569 aa17.01■□□□□ 0.31
CXCL12-208ENST00000496375 TSEN34Q9BSV6 310 aaKnown RBP17.01■□□□□ 0.31
CXCL12-208ENST00000496375 ACAD9Q9H845 621 aa17.01■□□□□ 0.31
CXCL12-208ENST00000496375 IL17RBQ9NRM6 502 aa17.01■□□□□ 0.31
CXCL12-208ENST00000496375 PPP4R2Q9NY27 417 aa17.01■□□□□ 0.31
CXCL12-208ENST00000496375 ANAPC4Q9UJX5 808 aa17.01■□□□□ 0.31
CXCL12-208ENST00000496375 TACC3Q9Y6A5 838 aa17.01■□□□□ 0.31
CXCL12-208ENST00000496375 A0A0C4DFX4 3053 aa17.01■□□□□ 0.31
CXCL12-208ENST00000496375 RANBP6O60518 1105 aaKnown RBP17■□□□□ 0.31
CXCL12-208ENST00000496375 PQBP1O60828 265 aaKnown RBP17■□□□□ 0.31
CXCL12-208ENST00000496375 DUSP11O75319 330 aaKnown RBP17■□□□□ 0.31
CXCL12-208ENST00000496375 CLTBP09497 229 aa17■□□□□ 0.31
CXCL12-208ENST00000496375 GSPT1P15170 499 aaKnown RBP17■□□□□ 0.31
CXCL12-208ENST00000496375 CNTN2Q02246 1040 aa17■□□□□ 0.31
CXCL12-208ENST00000496375 SHHQ15465 462 aa17■□□□□ 0.31
CXCL12-208ENST00000496375 C9orf50Q5SZB4 431 aa17■□□□□ 0.31
CXCL12-208ENST00000496375 KCTD1Q719H9 257 aa17■□□□□ 0.31
CXCL12-208ENST00000496375 KLHDC9Q8NEP7 349 aa17■□□□□ 0.31
CXCL12-208ENST00000496375 AGBL1Q96MI9 1066 aa17■□□□□ 0.31
CXCL12-208ENST00000496375 ABHD16BQ9H3Z7 469 aa17■□□□□ 0.31
CXCL12-208ENST00000496375 STARD7Q9NQZ5 370 aa17■□□□□ 0.31
CXCL12-208ENST00000496375 HELLSQ9NRZ9 838 aa17■□□□□ 0.31
CXCL12-208ENST00000496375 RNF146Q9NTX7 359 aa17■□□□□ 0.31
CXCL12-208ENST00000496375 STXBP5LQ9Y2K9 1186 aa17■□□□□ 0.31
CXCL12-208ENST00000496375 ZNF536O15090 1300 aa16.99■□□□□ 0.31
CXCL12-208ENST00000496375 MYADML2A6NDP7 307 aa16.99■□□□□ 0.31
CXCL12-208ENST00000496375 MOXD2PA6NHM9 499 aa16.99■□□□□ 0.31
CXCL12-208ENST00000496375 POTEB2H3BUK9 544 aa16.99■□□□□ 0.31
CXCL12-208ENST00000496375 ALX1Q15699 326 aa16.99■□□□□ 0.31
CXCL12-208ENST00000496375 KCNA10Q16322 511 aa16.99■□□□□ 0.31
CXCL12-208ENST00000496375 RCSD1Q6JBY9 416 aa16.99■□□□□ 0.31
CXCL12-208ENST00000496375 ARMCX2Q7L311 632 aa16.99■□□□□ 0.31
CXCL12-208ENST00000496375 RASGRP2Q7LDG7 609 aa16.99■□□□□ 0.31
CXCL12-208ENST00000496375 CCDC144CPQ8IYA2 1237 aa16.99■□□□□ 0.31
CXCL12-208ENST00000496375 NUP133Q8WUM0 1156 aa16.99■□□□□ 0.31
CXCL12-208ENST00000496375 FAM227BQ96M60 508 aa16.99■□□□□ 0.31
CXCL12-208ENST00000496375 A1CFQ9NQ94 594 aaKnown RBP16.99■□□□□ 0.31
CXCL12-208ENST00000496375 MTMR7Q9Y216 660 aa16.99■□□□□ 0.31
CXCL12-208ENST00000496375 A0A0D9SFI3 127 aa16.98■□□□□ 0.31
CXCL12-208ENST00000496375 ADCY6O43306 1168 aa16.98■□□□□ 0.31
CXCL12-208ENST00000496375 ORC4O43929 436 aa16.98■□□□□ 0.31
CXCL12-208ENST00000496375 PLA2G6O60733 806 aa16.98■□□□□ 0.31
CXCL12-208ENST00000496375 C6orf222P0C671 652 aaPredicted RBP16.98■□□□□ 0.31
CXCL12-208ENST00000496375 ALAS1P13196 640 aa16.98■□□□□ 0.31
CXCL12-208ENST00000496375 ITGB8P26012 769 aa16.98■□□□□ 0.31
CXCL12-208ENST00000496375 SNAP25P60880 206 aa16.98■□□□□ 0.31
CXCL12-208ENST00000496375 IRX5P78411 483 aaPredicted RBP16.98■□□□□ 0.31
CXCL12-208ENST00000496375 TKFCQ3LXA3 575 aa16.98■□□□□ 0.31
CXCL12-208ENST00000496375 CCDC144BQ3MJ40 725 aa16.98■□□□□ 0.31
CXCL12-208ENST00000496375 MCMDC2Q4G0Z9 681 aa16.98■□□□□ 0.31
CXCL12-208ENST00000496375 CCSAPQ6IQ19 270 aaPredicted RBP16.98■□□□□ 0.31
CXCL12-208ENST00000496375 CCDC174Q6PII3 467 aa16.98■□□□□ 0.31
CXCL12-208ENST00000496375 FAM133AQ8N9E0 248 aa16.98■□□□□ 0.31
CXCL12-208ENST00000496375 SPC25Q9HBM1 224 aa16.98■□□□□ 0.31
CXCL12-208ENST00000496375 PRR12Q9ULL5 1215 aa16.98■□□□□ 0.31
CXCL12-208ENST00000496375 TRIM6-TRIM34B2RNG4 842 aa16.97■□□□□ 0.31
CXCL12-208ENST00000496375 KIAA0355O15063 1070 aa16.97■□□□□ 0.31
CXCL12-208ENST00000496375 FGAP02671 866 aa16.97■□□□□ 0.31
CXCL12-208ENST00000496375 FGRP09769 529 aa16.97■□□□□ 0.31
CXCL12-208ENST00000496375 RAG1P15918 1043 aa16.97■□□□□ 0.31
CXCL12-208ENST00000496375 CST5P28325 142 aaPredicted RBP16.97■□□□□ 0.31
CXCL12-208ENST00000496375 NOVP48745 357 aa16.97■□□□□ 0.31
CXCL12-208ENST00000496375 FAM109BQ6ICB4 259 aaPredicted RBP16.97■□□□□ 0.31
CXCL12-208ENST00000496375 ANKRD33Q7Z3H0 272 aa16.97■□□□□ 0.31
CXCL12-208ENST00000496375 GLT1D1Q96MS3 346 aa16.97■□□□□ 0.31
CXCL12-208ENST00000496375 FAM161BQ96MY7 647 aa16.97■□□□□ 0.31
CXCL12-208ENST00000496375 TRERF1Q96PN7 1200 aa16.97■□□□□ 0.31
CXCL12-208ENST00000496375 KATNBL1Q9H079 304 aa16.97■□□□□ 0.31
CXCL12-208ENST00000496375 TOMM22Q9NS69 142 aa16.97■□□□□ 0.31
CXCL12-208ENST00000496375 TMEM39AQ9NV64 488 aa16.97■□□□□ 0.31
CXCL12-208ENST00000496375 SOWAHBA6NEL2 793 aa16.96■□□□□ 0.31
CXCL12-208ENST00000496375 DCDC2CA8MYV0 355 aa16.96■□□□□ 0.31
CXCL12-208ENST00000496375 HIP1O00291 1037 aa16.96■□□□□ 0.31
CXCL12-208ENST00000496375 HSPD1P10809 573 aaKnown RBP16.96■□□□□ 0.31
CXCL12-208ENST00000496375 SDSP20132 328 aa16.96■□□□□ 0.31
CXCL12-208ENST00000496375 GJA9P57773 515 aa16.96■□□□□ 0.31
CXCL12-208ENST00000496375 FAAP100Q0VG06 881 aa16.96■□□□□ 0.31
CXCL12-208ENST00000496375 NMIQ13287 307 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms