RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 ZNF213O14771 459 aa16.71■□□□□ 0.27
MACF1-223ENST00000496360 IPO7O95373 1038 aaKnown RBP16.71■□□□□ 0.27
MACF1-223ENST00000496360 BMP15O95972 392 aa16.71■□□□□ 0.27
MACF1-223ENST00000496360 ABL1P00519 1130 aa16.71■□□□□ 0.27
MACF1-223ENST00000496360 LSP1P33241 339 aa16.71■□□□□ 0.27
MACF1-223ENST00000496360 EP400NLQ6ZTU2 488 aa16.71■□□□□ 0.27
MACF1-223ENST00000496360 ARFGAP2Q8N6H7 521 aa16.71■□□□□ 0.27
MACF1-223ENST00000496360 ZNF473Q8WTR7 871 aaKnown RBP16.71■□□□□ 0.27
MACF1-223ENST00000496360 RWDD2AQ9UIY3 292 aa16.71■□□□□ 0.27
MACF1-223ENST00000496360 NID2Q14112 1375 aa16.71■□□□□ 0.26
MACF1-223ENST00000496360 PPP1R3GB7ZBB8 358 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 M0R2C6 588 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 PPP1R37O75864 691 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 FAM107AO95990 144 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 NBPF9Q3BBW0 867 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 PPP4R3AQ6IN85 833 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 ARMC9Q7Z3E5 817 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 EGFL6Q8IUX8 553 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 CCDC13Q8IYE1 715 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 MREGQ8N565 214 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 CCDC155Q8N6L0 562 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 TRIM6Q9C030 488 aaPredicted RBP16.7■□□□□ 0.26
MACF1-223ENST00000496360 CD248Q9HCU0 757 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 BATF3Q9NR55 127 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 SCN7AQ01118 1682 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 LAMB4A4D0S4 1761 aa16.7■□□□□ 0.26
MACF1-223ENST00000496360 A0A0G2JLW4 131 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 IFIT1P09914 478 aaKnown RBP16.69■□□□□ 0.26
MACF1-223ENST00000496360 SCP2P22307 547 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 IL15P40933 162 aaPredicted RBP16.69■□□□□ 0.26
MACF1-223ENST00000496360 PDIA6Q15084 440 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 TTF1Q15361 905 aaPredicted RBP16.69■□□□□ 0.26
MACF1-223ENST00000496360 PTGISQ16647 500 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 TTMPQ5BVD1 217 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 C6orf89Q6UWU4 347 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 EHD4Q9H223 541 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 SLC40A1Q9NP59 571 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 LUC7L2Q9Y383 392 aaKnown RBP16.69■□□□□ 0.26
MACF1-223ENST00000496360 UTRNP46939 3433 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 NBPF26B4DH59 902 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 FGAP02671 866 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 MMP1P03956 469 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 SSRP1Q08945 709 aaKnown RBP16.69■□□□□ 0.26
MACF1-223ENST00000496360 PDCLQ13371 301 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 MEA1Q16626 185 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 RCSD1Q6JBY9 416 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 NBPF10Q6P3W6 841 aaKnown RBP16.69■□□□□ 0.26
MACF1-223ENST00000496360 APOA5Q6Q788 366 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 CCDC121Q6ZUS5 278 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 KIAA1328Q86T90 577 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 DZIP3Q86Y13 1208 aaKnown RBP16.69■□□□□ 0.26
MACF1-223ENST00000496360 PARP9Q8IXQ6 854 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 NBPF15Q8N660 670 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 IQCDQ96DY2 449 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 ZNHIT6Q9NWK9 470 aaKnown RBP16.69■□□□□ 0.26
MACF1-223ENST00000496360 HDAC6Q9UBN7 1215 aa16.69■□□□□ 0.26
MACF1-223ENST00000496360 HMGB1P1B2RPK0 211 aaPredicted RBP16.68■□□□□ 0.26
MACF1-223ENST00000496360 CAMTA2O94983 1202 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 FMNL1O95466 1100 aaPredicted RBP16.68■□□□□ 0.26
MACF1-223ENST00000496360 HERVK_113P62684 666 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 DPYDQ12882 1025 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 PPP2R5AQ15172 486 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 NTRK3Q16288 839 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 SGMS1Q86VZ5 419 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 RETREG2Q8NC44 543 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 TRIM58Q8NG06 486 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 OSBP2Q969R2 916 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 SGSM3Q96HU1 749 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 CAPN11Q9UMQ6 739 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 MYO5AQ9Y4I1 1855 aaKnown RBP16.68■□□□□ 0.26
MACF1-223ENST00000496360 ENC1O14682 589 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 ZBTB43O43298 467 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 SERPINB2P05120 415 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 CD44P16070 742 aaKnown RBP16.68■□□□□ 0.26
MACF1-223ENST00000496360 DPEP1P16444 411 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 TCP1P17987 556 aaKnown RBP16.68■□□□□ 0.26
MACF1-223ENST00000496360 SLMAPQ14BN4 828 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 TCP11X2Q5H9J9 407 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 NLRP14Q86W24 1093 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.68■□□□□ 0.26
MACF1-223ENST00000496360 APPBP2Q92624 585 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 AIFM3Q96NN9 605 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 NUP58Q9BVL2 599 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 STIM2Q9P246 746 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 SNX12Q9UMY4 172 aa16.68■□□□□ 0.26
MACF1-223ENST00000496360 VAV2P52735 878 aa16.67■□□□□ 0.26
MACF1-223ENST00000496360 CDK17Q00537 523 aa16.67■□□□□ 0.26
MACF1-223ENST00000496360 ICA1Q05084 483 aa16.67■□□□□ 0.26
MACF1-223ENST00000496360 SEMA3FQ13275 785 aa16.67■□□□□ 0.26
MACF1-223ENST00000496360 RNF187Q5TA31 235 aaPredicted RBP16.67■□□□□ 0.26
MACF1-223ENST00000496360 TBC1D9BQ66K14 1250 aa16.67■□□□□ 0.26
MACF1-223ENST00000496360 BICDL1Q6ZP65 573 aa16.67■□□□□ 0.26
MACF1-223ENST00000496360 MYCBPAPQ8TBZ2 947 aa16.67■□□□□ 0.26
MACF1-223ENST00000496360 PAGE5Q96GU1 130 aa16.67■□□□□ 0.26
MACF1-223ENST00000496360 CAPZA3Q96KX2 299 aa16.67■□□□□ 0.26
MACF1-223ENST00000496360 MYD88Q99836 296 aa16.67■□□□□ 0.26
MACF1-223ENST00000496360 RNF14Q9UBS8 474 aa16.67■□□□□ 0.26
MACF1-223ENST00000496360 AFDNP55196 1824 aaKnown RBP16.67■□□□□ 0.26
MACF1-223ENST00000496360 UBN2Q6ZU65 1347 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms