RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 FDX1P10109 184 aa25.19■■□□□ 1.62
ECHDC3-205ENST00000496136 KIF23Q02241 960 aaPredicted RBP25.19■■□□□ 1.62
ECHDC3-205ENST00000496136 WASF1Q92558 559 aa25.19■■□□□ 1.62
ECHDC3-205ENST00000496136 ALG1Q9BT22 464 aa25.19■■□□□ 1.62
ECHDC3-205ENST00000496136 SMCHD1A6NHR9 2005 aa25.19■■□□□ 1.62
ECHDC3-205ENST00000496136 PPP1R11O60927 126 aaPredicted RBP25.18■■□□□ 1.62
ECHDC3-205ENST00000496136 POTEEQ6S8J3 1075 aa25.18■■□□□ 1.62
ECHDC3-205ENST00000496136 IGF2BP3O00425 579 aaKnown RBP eCLIP25.18■■□□□ 1.62
ECHDC3-205ENST00000496136 TM4SF4P48230 202 aa25.18■■□□□ 1.62
ECHDC3-205ENST00000496136 PNMA3Q9UL41 463 aa25.18■■□□□ 1.62
ECHDC3-205ENST00000496136 KIF3AQ9Y496 699 aa25.18■■□□□ 1.62
ECHDC3-205ENST00000496136 AOC2O75106 756 aa25.17■■□□□ 1.62
ECHDC3-205ENST00000496136 ZBED4O75132 1171 aa25.17■■□□□ 1.62
ECHDC3-205ENST00000496136 CYP2C8P10632 490 aa25.17■■□□□ 1.62
ECHDC3-205ENST00000496136 HERVK_113P62684 666 aa25.17■■□□□ 1.62
ECHDC3-205ENST00000496136 SREBF2Q12772 1141 aa25.17■■□□□ 1.62
ECHDC3-205ENST00000496136 LARP1BQ659C4 914 aaKnown RBP25.17■■□□□ 1.62
ECHDC3-205ENST00000496136 CCDC174Q6PII3 467 aa25.17■■□□□ 1.62
ECHDC3-205ENST00000496136 LBX2Q6XYB7 198 aa25.17■■□□□ 1.62
ECHDC3-205ENST00000496136 GPKOWQ92917 476 aaPredicted RBP eCLIP25.17■■□□□ 1.62
ECHDC3-205ENST00000496136 GJB4Q9NTQ9 266 aa25.17■■□□□ 1.62
ECHDC3-205ENST00000496136 ZNF536O15090 1300 aa25.17■■□□□ 1.62
ECHDC3-205ENST00000496136 WWC2Q6AWC2 1192 aa25.16■■□□□ 1.62
ECHDC3-205ENST00000496136 IFNL1Q8IU54 200 aa25.16■■□□□ 1.62
ECHDC3-205ENST00000496136 REPS2Q8NFH8 660 aa25.16■■□□□ 1.62
ECHDC3-205ENST00000496136 COL11A1P12107 1806 aaPredicted RBP25.16■■□□□ 1.62
ECHDC3-205ENST00000496136 HEATR3Q7Z4Q2 680 aa25.16■■□□□ 1.62
ECHDC3-205ENST00000496136 FBXO11Q86XK2 927 aa25.16■■□□□ 1.62
ECHDC3-205ENST00000496136 COA7Q96BR5 231 aa25.16■■□□□ 1.62
ECHDC3-205ENST00000496136 AMNQ9BXJ7 453 aa25.16■■□□□ 1.62
ECHDC3-205ENST00000496136 BARHL2Q9NY43 387 aa25.16■■□□□ 1.62
ECHDC3-205ENST00000496136 WDR33Q9C0J8 1336 aaKnown RBP25.15■■□□□ 1.62
ECHDC3-205ENST00000496136 VEGFBP49765 207 aa25.15■■□□□ 1.62
ECHDC3-205ENST00000496136 CPXCR1Q8N123 301 aa25.15■■□□□ 1.62
ECHDC3-205ENST00000496136 SHISA4Q96DD7 197 aa25.15■■□□□ 1.62
ECHDC3-205ENST00000496136 ZCCHC17Q9NP64 241 aaKnown RBP25.15■■□□□ 1.62
ECHDC3-205ENST00000496136 VPS54Q9P1Q0 977 aa25.15■■□□□ 1.62
ECHDC3-205ENST00000496136 CTDP1Q9Y5B0 961 aaPredicted RBP25.15■■□□□ 1.62
ECHDC3-205ENST00000496136 PCDHA1Q9Y5I3 950 aa25.15■■□□□ 1.62
ECHDC3-205ENST00000496136 ICAM1P05362 532 aa25.14■■□□□ 1.62
ECHDC3-205ENST00000496136 PDCP20941 246 aa25.14■■□□□ 1.62
ECHDC3-205ENST00000496136 SYT1P21579 422 aa25.14■■□□□ 1.62
ECHDC3-205ENST00000496136 TMEM132BQ14DG7 1078 aa25.14■■□□□ 1.62
ECHDC3-205ENST00000496136 TYW1BQ6NUM6 668 aa25.14■■□□□ 1.62
ECHDC3-205ENST00000496136 MB21D1Q8N884 522 aa25.14■■□□□ 1.62
ECHDC3-205ENST00000496136 C8orf76Q96K31 380 aa25.14■■□□□ 1.62
ECHDC3-205ENST00000496136 AGBL1Q96MI9 1066 aa25.14■■□□□ 1.62
ECHDC3-205ENST00000496136 RAVER2Q9HCJ3 691 aaKnown RBP25.14■■□□□ 1.62
ECHDC3-205ENST00000496136 ZNF214Q9UL59 606 aaPredicted RBP25.14■■□□□ 1.62
ECHDC3-205ENST00000496136 STXBP3O00186 592 aa25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 HSPA6P17066 643 aa25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 DDIT3P35638 169 aa25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 FOSBP53539 338 aa25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 OTUD7BQ6GQQ9 843 aa25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 SH3GLB2Q9NR46 395 aa25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 RBPJLQ9UBG7 517 aa25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 hCG_1984214I3L0E3 225 aa25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 ATP2A1O14983 1001 aa25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 OAZ1P54368 228 aa25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 USH1GQ495M9 461 aa25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 ZNF713Q8N859 430 aaPredicted RBP25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 FBXO18Q8NFZ0 1043 aa25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 SMCR8Q8TEV9 937 aaPredicted RBP25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 BTBD7Q9P203 1132 aa25.13■■□□□ 1.61
ECHDC3-205ENST00000496136 PEX10O60683 326 aa25.12■■□□□ 1.61
ECHDC3-205ENST00000496136 XBP1P17861 261 aa25.12■■□□□ 1.61
ECHDC3-205ENST00000496136 TAL1P17542 331 aaPredicted RBP25.11■■□□□ 1.61
ECHDC3-205ENST00000496136 MAP2K2P36507 400 aa25.11■■□□□ 1.61
ECHDC3-205ENST00000496136 KRT40Q6A162 431 aa25.11■■□□□ 1.61
ECHDC3-205ENST00000496136 REM2Q8IYK8 340 aaPredicted RBP25.11■■□□□ 1.61
ECHDC3-205ENST00000496136 PARK7Q99497 189 aaKnown RBP25.11■■□□□ 1.61
ECHDC3-205ENST00000496136 TXNRD2Q9NNW7 524 aa25.11■■□□□ 1.61
ECHDC3-205ENST00000496136 CCPG1Q9ULG6 757 aa25.11■■□□□ 1.61
ECHDC3-205ENST00000496136 KCNJ14Q9UNX9 436 aa25.11■■□□□ 1.61
ECHDC3-205ENST00000496136 NAPAP54920 295 aa25.1■■□□□ 1.61
ECHDC3-205ENST00000496136 GUCY1B3Q02153 619 aa25.1■■□□□ 1.61
ECHDC3-205ENST00000496136 TRAF1Q13077 416 aa25.1■■□□□ 1.61
ECHDC3-205ENST00000496136 RABGAP1Q9Y3P9 1069 aa25.1■■□□□ 1.61
ECHDC3-205ENST00000496136 CNMDO75829 334 aa25.1■■□□□ 1.61
ECHDC3-205ENST00000496136 STAT3P40763 770 aa25.1■■□□□ 1.61
ECHDC3-205ENST00000496136 TRIM29Q14134 588 aa25.1■■□□□ 1.61
ECHDC3-205ENST00000496136 GTF3C2Q8WUA4 911 aaPredicted RBP25.1■■□□□ 1.61
ECHDC3-205ENST00000496136 PAGR1Q9BTK6 254 aa25.1■■□□□ 1.61
ECHDC3-205ENST00000496136 PHF20Q9BVI0 1012 aa25.1■■□□□ 1.61
ECHDC3-205ENST00000496136 TEX13BQ9BXU2 312 aa25.1■■□□□ 1.61
ECHDC3-205ENST00000496136 PNMA2Q9UL42 364 aa25.1■■□□□ 1.61
ECHDC3-205ENST00000496136 A0A0G2JMZ2 1700 aa25.1■■□□□ 1.61
ECHDC3-205ENST00000496136 STX6O43752 255 aa25.09■■□□□ 1.61
ECHDC3-205ENST00000496136 GCLCP48506 637 aaPredicted RBP25.09■■□□□ 1.61
ECHDC3-205ENST00000496136 PKP1Q13835 747 aa25.09■■□□□ 1.61
ECHDC3-205ENST00000496136 PLS1Q14651 629 aa25.09■■□□□ 1.61
ECHDC3-205ENST00000496136 TAF1CQ15572 869 aaPredicted RBP25.09■■□□□ 1.61
ECHDC3-205ENST00000496136 RGS22Q8NE09 1264 aa25.09■■□□□ 1.61
ECHDC3-205ENST00000496136 ZMYND12Q9H0C1 365 aa25.09■■□□□ 1.61
ECHDC3-205ENST00000496136 RIPK3Q9Y572 518 aa25.09■■□□□ 1.61
ECHDC3-205ENST00000496136 H3BQV1 296 aa25.08■■□□□ 1.61
ECHDC3-205ENST00000496136 NLRP5P59047 1200 aa25.08■■□□□ 1.61
ECHDC3-205ENST00000496136 Q3C1V9 767 aa25.08■■□□□ 1.61
ECHDC3-205ENST00000496136 IFFO2Q5TF58 517 aa25.08■■□□□ 1.61
ECHDC3-205ENST00000496136 SNRNP48Q6IEG0 339 aaKnown RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms