RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 GOLIM4O00461 696 aa16.16■□□□□ 0.18
COL1A1-209ENST00000495677 CYP2C18P33260 490 aa16.16■□□□□ 0.18
COL1A1-209ENST00000495677 CLASRPQ8N2M8 674 aaKnown RBP16.16■□□□□ 0.18
COL1A1-209ENST00000495677 CHST13Q8NET6 341 aa16.16■□□□□ 0.18
COL1A1-209ENST00000495677 FGD4Q96M96 766 aa16.16■□□□□ 0.18
COL1A1-209ENST00000495677 KATNBL1Q9H079 304 aa16.16■□□□□ 0.18
COL1A1-209ENST00000495677 NKX2-4Q9H2Z4 354 aa16.16■□□□□ 0.18
COL1A1-209ENST00000495677 FBXO40Q9UH90 709 aa16.16■□□□□ 0.18
COL1A1-209ENST00000495677 YBX2Q9Y2T7 364 aaKnown RBP16.16■□□□□ 0.18
COL1A1-209ENST00000495677 SCN5AQ14524 2016 aa16.16■□□□□ 0.18
COL1A1-209ENST00000495677 F5H6K3 240 aa16.15■□□□□ 0.18
COL1A1-209ENST00000495677 OAZ1P54368 228 aa16.15■□□□□ 0.18
COL1A1-209ENST00000495677 KLRC3Q07444 240 aa16.15■□□□□ 0.18
COL1A1-209ENST00000495677 CTR9Q6PD62 1173 aa16.15■□□□□ 0.18
COL1A1-209ENST00000495677 ARMCX2Q7L311 632 aa16.15■□□□□ 0.18
COL1A1-209ENST00000495677 RPUSD2Q8IZ73 545 aaKnown RBP16.15■□□□□ 0.18
COL1A1-209ENST00000495677 DDRGK1Q96HY6 314 aa16.15■□□□□ 0.18
COL1A1-209ENST00000495677 IL1RAPL2Q9NP60 686 aa16.15■□□□□ 0.18
COL1A1-209ENST00000495677 CYP2D7A0A087X1C5 515 aa16.14■□□□□ 0.17
COL1A1-209ENST00000495677 ERC2O15083 957 aa16.14■□□□□ 0.17
COL1A1-209ENST00000495677 ZBED4O75132 1171 aa16.14■□□□□ 0.17
COL1A1-209ENST00000495677 MBD4O95243 580 aa16.14■□□□□ 0.17
COL1A1-209ENST00000495677 FDX1P10109 184 aa16.14■□□□□ 0.17
COL1A1-209ENST00000495677 UBE3CQ15386 1083 aa16.14■□□□□ 0.17
COL1A1-209ENST00000495677 KIF1BPQ96EK5 621 aa16.14■□□□□ 0.17
COL1A1-209ENST00000495677 HIPK3Q9H422 1215 aa16.14■□□□□ 0.17
COL1A1-209ENST00000495677 SLC38A10Q9HBR0 1119 aa16.14■□□□□ 0.17
COL1A1-209ENST00000495677 PAG1Q9NWQ8 432 aa16.14■□□□□ 0.17
COL1A1-209ENST00000495677 GNEQ9Y223 722 aaKnown RBP16.14■□□□□ 0.17
COL1A1-209ENST00000495677 PCDHA11Q9Y5I1 949 aa16.14■□□□□ 0.17
COL1A1-209ENST00000495677 TRIP12Q14669 1992 aaPredicted RBP16.13■□□□□ 0.17
COL1A1-209ENST00000495677 APBB1O00213 710 aa16.13■□□□□ 0.17
COL1A1-209ENST00000495677 ITGA7Q13683 1181 aa16.13■□□□□ 0.17
COL1A1-209ENST00000495677 SBK1Q52WX2 424 aa16.13■□□□□ 0.17
COL1A1-209ENST00000495677 OTOP2Q7RTS6 562 aa16.13■□□□□ 0.17
COL1A1-209ENST00000495677 ITPRIPQ8IWB1 547 aa16.13■□□□□ 0.17
COL1A1-209ENST00000495677 FTSJ3Q8IY81 847 aaKnown RBP16.13■□□□□ 0.17
COL1A1-209ENST00000495677 CCDC144CPQ8IYA2 1237 aa16.13■□□□□ 0.17
COL1A1-209ENST00000495677 CPXCR1Q8N123 301 aa16.13■□□□□ 0.17
COL1A1-209ENST00000495677 ANKRD35Q8N283 1001 aa16.13■□□□□ 0.17
COL1A1-209ENST00000495677 MKL1Q969V6 931 aa16.13■□□□□ 0.17
COL1A1-209ENST00000495677 DNAJC2Q99543 621 aaKnown RBP16.13■□□□□ 0.17
COL1A1-209ENST00000495677 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.13■□□□□ 0.17
COL1A1-209ENST00000495677 SYNPO2Q9UMS6 1093 aa16.13■□□□□ 0.17
COL1A1-209ENST00000495677 Q9Y3F1 56 aa16.13■□□□□ 0.17
COL1A1-209ENST00000495677 LRRC37A2A6NM11 1700 aa16.12■□□□□ 0.17
COL1A1-209ENST00000495677 NDUFB10O96000 172 aa16.12■□□□□ 0.17
COL1A1-209ENST00000495677 RLBP1P12271 317 aa16.12■□□□□ 0.17
COL1A1-209ENST00000495677 TNFAIP2Q03169 654 aa16.12■□□□□ 0.17
COL1A1-209ENST00000495677 NOC4LQ9BVI4 516 aaKnown RBP16.12■□□□□ 0.17
COL1A1-209ENST00000495677 ARPP21Q9UBL0 812 aaPredicted RBP16.12■□□□□ 0.17
COL1A1-209ENST00000495677 FEM1BQ9UK73 627 aa16.12■□□□□ 0.17
COL1A1-209ENST00000495677 SLC4A7Q9Y6M7 1214 aa16.12■□□□□ 0.17
COL1A1-209ENST00000495677 ASTN1O14525 1302 aa16.12■□□□□ 0.17
COL1A1-209ENST00000495677 GRIN2DO15399 1336 aa16.12■□□□□ 0.17
COL1A1-209ENST00000495677 LCTP09848 1927 aa16.11■□□□□ 0.17
COL1A1-209ENST00000495677 RAD21O60216 631 aa16.11■□□□□ 0.17
COL1A1-209ENST00000495677 PFKMP08237 780 aa16.11■□□□□ 0.17
COL1A1-209ENST00000495677 IFIT2P09913 472 aaKnown RBP16.11■□□□□ 0.17
COL1A1-209ENST00000495677 ATP5JP18859 108 aa16.11■□□□□ 0.17
COL1A1-209ENST00000495677 SLFNL1Q499Z3 407 aa16.11■□□□□ 0.17
COL1A1-209ENST00000495677 PPP2R2DQ66LE6 453 aa16.11■□□□□ 0.17
COL1A1-209ENST00000495677 CXCL17Q6UXB2 119 aa16.11■□□□□ 0.17
COL1A1-209ENST00000495677 FAM133AQ8N9E0 248 aa16.11■□□□□ 0.17
COL1A1-209ENST00000495677 TET1Q8NFU7 2136 aa16.11■□□□□ 0.17
COL1A1-209ENST00000495677 VWCEQ96DN2 955 aa16.11■□□□□ 0.17
COL1A1-209ENST00000495677 NUP88Q99567 741 aaPredicted RBP16.11■□□□□ 0.17
COL1A1-209ENST00000495677 COG5Q9UP83 839 aa16.11■□□□□ 0.17
COL1A1-209ENST00000495677 SLC4A4Q9Y6R1 1079 aa16.11■□□□□ 0.17
COL1A1-209ENST00000495677 UMODL1Q5DID0 1318 aa16.11■□□□□ 0.17
COL1A1-209ENST00000495677 SCN10AQ9Y5Y9 1956 aa16.1■□□□□ 0.17
COL1A1-209ENST00000495677 IGKV6D-41A0A0C4DH26 115 aa16.1■□□□□ 0.17
COL1A1-209ENST00000495677 ASB14A6NK59 587 aa16.1■□□□□ 0.17
COL1A1-209ENST00000495677 ZEB2O60315 1214 aa16.1■□□□□ 0.17
COL1A1-209ENST00000495677 RASA1P20936 1047 aa16.1■□□□□ 0.17
COL1A1-209ENST00000495677 BEX3Q00994 111 aa16.1■□□□□ 0.17
COL1A1-209ENST00000495677 IQSEC1Q6DN90 963 aa16.1■□□□□ 0.17
COL1A1-209ENST00000495677 GIMAP6Q6P9H5 292 aa16.1■□□□□ 0.17
COL1A1-209ENST00000495677 RPAP2Q8IXW5 612 aaPredicted RBP16.1■□□□□ 0.17
COL1A1-209ENST00000495677 AGBL1Q96MI9 1066 aa16.1■□□□□ 0.17
COL1A1-209ENST00000495677 NECAB3Q96P71 396 aaPredicted RBP16.1■□□□□ 0.17
COL1A1-209ENST00000495677 HAUS7Q99871 368 aa16.1■□□□□ 0.17
COL1A1-209ENST00000495677 WNT8AQ9H1J5 351 aa16.1■□□□□ 0.17
COL1A1-209ENST00000495677 RAVER2Q9HCJ3 691 aaKnown RBP16.1■□□□□ 0.17
COL1A1-209ENST00000495677 CTDP1Q9Y5B0 961 aaPredicted RBP16.1■□□□□ 0.17
COL1A1-209ENST00000495677 MTCH2Q9Y6C9 303 aa16.1■□□□□ 0.17
COL1A1-209ENST00000495677 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.09■□□□□ 0.17
COL1A1-209ENST00000495677 CCER2I3L3R5 266 aa16.09■□□□□ 0.17
COL1A1-209ENST00000495677 B4GALT4O60513 344 aa16.09■□□□□ 0.17
COL1A1-209ENST00000495677 RAB11FIP3O75154 756 aa16.09■□□□□ 0.17
COL1A1-209ENST00000495677 RABGGTBP53611 331 aa16.09■□□□□ 0.17
COL1A1-209ENST00000495677 CCL23P55773 120 aa16.09■□□□□ 0.17
COL1A1-209ENST00000495677 TFF2Q03403 129 aa16.09■□□□□ 0.17
COL1A1-209ENST00000495677 ZSCAN25Q6NSZ9 544 aa16.09■□□□□ 0.17
COL1A1-209ENST00000495677 LRFN3Q9BTN0 628 aa16.09■□□□□ 0.17
COL1A1-209ENST00000495677 BOLA2Q9H3K6 86 aa16.09■□□□□ 0.17
COL1A1-209ENST00000495677 PTPRSQ13332 1948 aa16.09■□□□□ 0.17
COL1A1-209ENST00000495677 TLL1O43897 1013 aa16.08■□□□□ 0.16
COL1A1-209ENST00000495677 ATP2A2P16615 1042 aaKnown RBP16.08■□□□□ 0.16
COL1A1-209ENST00000495677 CNTN2Q02246 1040 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms