RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 USP17L18D6R9N7 530 aa18.06■□□□□ 0.48
PHF1-211ENST00000495509 USP17L22D6RA61 530 aa18.06■□□□□ 0.48
PHF1-211ENST00000495509 USP17L17D6RBQ6 530 aa18.06■□□□□ 0.48
PHF1-211ENST00000495509 USP17L19D6RCP7 530 aa18.06■□□□□ 0.48
PHF1-211ENST00000495509 USP17L20D6RJB6 530 aa18.06■□□□□ 0.48
PHF1-211ENST00000495509 USP17L24Q0WX57 530 aa18.06■□□□□ 0.48
PHF1-211ENST00000495509 NR5A1Q13285 461 aa18.06■□□□□ 0.48
PHF1-211ENST00000495509 USH1GQ495M9 461 aa18.06■□□□□ 0.48
PHF1-211ENST00000495509 DIS3L2Q8IYB7 885 aaKnown RBP18.06■□□□□ 0.48
PHF1-211ENST00000495509 MS4A4AQ96JQ5 239 aa18.06■□□□□ 0.48
PHF1-211ENST00000495509 RANBP17Q9H2T7 1088 aaKnown RBP18.06■□□□□ 0.48
PHF1-211ENST00000495509 PCDHA1Q9Y5I3 950 aa18.06■□□□□ 0.48
PHF1-211ENST00000495509 SNAPC2Q13487 334 aa18.05■□□□□ 0.48
PHF1-211ENST00000495509 SPRYD7Q5W111 196 aa18.05■□□□□ 0.48
PHF1-211ENST00000495509 FBXO11Q86XK2 927 aa18.05■□□□□ 0.48
PHF1-211ENST00000495509 PROCA1Q8NCQ7 364 aaPredicted RBP18.05■□□□□ 0.48
PHF1-211ENST00000495509 RGS22Q8NE09 1264 aa18.05■□□□□ 0.48
PHF1-211ENST00000495509 ATG4CQ96DT6 458 aa18.05■□□□□ 0.48
PHF1-211ENST00000495509 SMCO2A6NFE2 343 aa18.04■□□□□ 0.48
PHF1-211ENST00000495509 COG2Q14746 738 aa18.04■□□□□ 0.48
PHF1-211ENST00000495509 NOM1Q5C9Z4 860 aaKnown RBP18.04■□□□□ 0.48
PHF1-211ENST00000495509 GPAT2Q6NUI2 795 aa18.04■□□□□ 0.48
PHF1-211ENST00000495509 AMNQ9BXJ7 453 aa18.04■□□□□ 0.48
PHF1-211ENST00000495509 LOC285556D6RIA3 1793 aa18.04■□□□□ 0.48
PHF1-211ENST00000495509 ZNF536O15090 1300 aa18.04■□□□□ 0.48
PHF1-211ENST00000495509 U2AF2P26368 475 aaKnown RBP eCLIP18.04■□□□□ 0.483e-7■■■□□ 14.7
PHF1-211ENST00000495509 DSG3P32926 999 aa18.04■□□□□ 0.48
PHF1-211ENST00000495509 ZNF157P51786 506 aaPredicted RBP18.04■□□□□ 0.48
PHF1-211ENST00000495509 SAFBQ15424 915 aaKnown RBP eCLIP18.04■□□□□ 0.48
PHF1-211ENST00000495509 AGBL1Q96MI9 1066 aa18.04■□□□□ 0.48
PHF1-211ENST00000495509 ZMYND12Q9H0C1 365 aa18.04■□□□□ 0.48
PHF1-211ENST00000495509 ZSCAN16Q9H4T2 348 aaPredicted RBP18.04■□□□□ 0.48
PHF1-211ENST00000495509 COL11A1P12107 1806 aaPredicted RBP18.03■□□□□ 0.48
PHF1-211ENST00000495509 VWA5AO00534 786 aa18.03■□□□□ 0.48
PHF1-211ENST00000495509 HOXA7P31268 230 aaPredicted RBP18.03■□□□□ 0.48
PHF1-211ENST00000495509 KRT2P35908 639 aa18.03■□□□□ 0.48
PHF1-211ENST00000495509 DNM1Q05193 864 aaKnown RBP18.03■□□□□ 0.48
PHF1-211ENST00000495509 GNL2Q13823 731 aaKnown RBP18.03■□□□□ 0.48
PHF1-211ENST00000495509 EARS2Q5JPH6 523 aaKnown RBP18.03■□□□□ 0.48
PHF1-211ENST00000495509 POTEEQ6S8J3 1075 aa18.03■□□□□ 0.48
PHF1-211ENST00000495509 FASTKD5Q7L8L6 764 aaKnown RBP18.03■□□□□ 0.48
PHF1-211ENST00000495509 CPXCR1Q8N123 301 aa18.03■□□□□ 0.48
PHF1-211ENST00000495509 RASGRP4Q8TDF6 673 aa18.03■□□□□ 0.48
PHF1-211ENST00000495509 SLC38A10Q9HBR0 1119 aa18.03■□□□□ 0.48
PHF1-211ENST00000495509 RAVER2Q9HCJ3 691 aaKnown RBP18.03■□□□□ 0.48
PHF1-211ENST00000495509 AGTPBP1Q9UPW5 1226 aa18.03■□□□□ 0.48
PHF1-211ENST00000495509 FAM205CA6NFA0 338 aa18.02■□□□□ 0.48
PHF1-211ENST00000495509 hCG_1984214I3L0E3 225 aa18.02■□□□□ 0.48
PHF1-211ENST00000495509 PEX10O60683 326 aa18.02■□□□□ 0.48
PHF1-211ENST00000495509 BAG4O95429 457 aaKnown RBP18.02■□□□□ 0.48
PHF1-211ENST00000495509 NBR1Q14596 966 aa18.02■□□□□ 0.48
PHF1-211ENST00000495509 ZNF713Q8N859 430 aaPredicted RBP18.02■□□□□ 0.48
PHF1-211ENST00000495509 CCDC148Q8NFR7 591 aa18.02■□□□□ 0.48
PHF1-211ENST00000495509 P2RX7Q99572 595 aaKnown RBP18.02■□□□□ 0.48
PHF1-211ENST00000495509 FOXP1Q9H334 677 aaPredicted RBP18.02■□□□□ 0.48
PHF1-211ENST00000495509 TFIP11Q9UBB9 837 aaKnown RBP18.02■□□□□ 0.48
PHF1-211ENST00000495509 PCDHA4Q9UN74 947 aa18.02■□□□□ 0.48
PHF1-211ENST00000495509 ADAMTS5Q9UNA0 930 aa18.02■□□□□ 0.48
PHF1-211ENST00000495509 TLL2Q9Y6L7 1015 aa18.02■□□□□ 0.48
PHF1-211ENST00000495509 SPDYE16A6NNV3 312 aaPredicted RBP18.02■□□□□ 0.47
PHF1-211ENST00000495509 CALML3P27482 149 aa18.02■□□□□ 0.47
PHF1-211ENST00000495509 GTF2A2P52657 109 aa18.02■□□□□ 0.47
PHF1-211ENST00000495509 RGMBQ6NW40 437 aa18.02■□□□□ 0.47
PHF1-211ENST00000495509 RASAL3Q86YV0 1011 aa18.02■□□□□ 0.47
PHF1-211ENST00000495509 NOSTRINQ8IVI9 506 aa18.02■□□□□ 0.47
PHF1-211ENST00000495509 BLIDQ8IZY5 108 aa18.02■□□□□ 0.47
PHF1-211ENST00000495509 CCDC12Q8WUD4 166 aaPredicted RBP18.02■□□□□ 0.47
PHF1-211ENST00000495509 BRI3BPQ8WY22 251 aa18.02■□□□□ 0.47
PHF1-211ENST00000495509 TNFRSF25Q93038 417 aa18.02■□□□□ 0.47
PHF1-211ENST00000495509 ASCC2Q9H1I8 757 aaPredicted RBP18.02■□□□□ 0.47
PHF1-211ENST00000495509 HOXC10Q9NYD6 342 aa18.02■□□□□ 0.47
PHF1-211ENST00000495509 ABT1Q9ULW3 272 aaKnown RBP18.02■□□□□ 0.47
PHF1-211ENST00000495509 CCL15-CCL14A0A0B4J2E2 113 aa18.01■□□□□ 0.47
PHF1-211ENST00000495509 TMEM88BA6NKF7 163 aa18.01■□□□□ 0.47
PHF1-211ENST00000495509 M0R2N6 131 aa18.01■□□□□ 0.47
PHF1-211ENST00000495509 ZBED4O75132 1171 aa18.01■□□□□ 0.47
PHF1-211ENST00000495509 ICAM1P05362 532 aa18.01■□□□□ 0.47
PHF1-211ENST00000495509 ZBTB48P10074 688 aaPredicted RBP18.01■□□□□ 0.47
PHF1-211ENST00000495509 CETPP11597 493 aa18.01■□□□□ 0.47
PHF1-211ENST00000495509 CCL15Q16663 113 aa18.01■□□□□ 0.47
PHF1-211ENST00000495509 CLEC17AQ6ZS10 378 aa18.01■□□□□ 0.47
PHF1-211ENST00000495509 REPS2Q8NFH8 660 aa18.01■□□□□ 0.47
PHF1-211ENST00000495509 C6orf50Q9HD87 102 aa18.01■□□□□ 0.47
PHF1-211ENST00000495509 ESYT2A0FGR8 921 aa18■□□□□ 0.47
PHF1-211ENST00000495509 OPLAHO14841 1288 aa18■□□□□ 0.47
PHF1-211ENST00000495509 FSTL1Q12841 308 aa18■□□□□ 0.47
PHF1-211ENST00000495509 DAGLBQ8NCG7 672 aa18■□□□□ 0.47
PHF1-211ENST00000495509 TBC1D5Q92609 795 aa18■□□□□ 0.47
PHF1-211ENST00000495509 FTOQ9C0B1 505 aaKnown RBP eCLIP18■□□□□ 0.47
PHF1-211ENST00000495509 PSTPIP2Q9H939 334 aa18■□□□□ 0.47
PHF1-211ENST00000495509 BIN2Q9UBW5 565 aaPredicted RBP18■□□□□ 0.47
PHF1-211ENST00000495509 CCPG1Q9ULG6 757 aa18■□□□□ 0.47
PHF1-211ENST00000495509 PCDHA6Q9UN73 950 aa18■□□□□ 0.47
PHF1-211ENST00000495509 PCDHA8Q9Y5H6 950 aa18■□□□□ 0.47
PHF1-211ENST00000495509 BTBD19C9JJ37 291 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 GNA11P29992 359 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 ADCY7P51828 1080 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 IRX3P78415 501 aaPredicted RBP17.99■□□□□ 0.47
PHF1-211ENST00000495509 TMEM132BQ14DG7 1078 aa17.99■□□□□ 0.47
PHF1-211ENST00000495509 UBE2SQ16763 222 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms