RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 CEP131Q9UPN4 1083 aa18.68■□□□□ 0.58
CBX4-204ENST00000495122 BMP15O95972 392 aa18.67■□□□□ 0.58
CBX4-204ENST00000495122 RASA1P20936 1047 aa18.67■□□□□ 0.58
CBX4-204ENST00000495122 SMARCA1P28370 1054 aa18.67■□□□□ 0.58
CBX4-204ENST00000495122 PICALMQ13492 652 aa18.67■□□□□ 0.58
CBX4-204ENST00000495122 GRM4Q14833 912 aa18.67■□□□□ 0.58
CBX4-204ENST00000495122 ANKRD23Q86SG2 305 aa18.67■□□□□ 0.58
CBX4-204ENST00000495122 ZSCAN29Q8IWY8 852 aaPredicted RBP18.67■□□□□ 0.58
CBX4-204ENST00000495122 DIS3L2Q8IYB7 885 aaKnown RBP18.67■□□□□ 0.58
CBX4-204ENST00000495122 SCYL3Q8IZE3 742 aa18.67■□□□□ 0.58
CBX4-204ENST00000495122 ENGASEQ8NFI3 743 aa18.67■□□□□ 0.58
CBX4-204ENST00000495122 PCDHA7Q9UN72 937 aa18.67■□□□□ 0.58
CBX4-204ENST00000495122 CNTNAP5Q8WYK1 1306 aa18.67■□□□□ 0.58
CBX4-204ENST00000495122 ADGRA2Q96PE1 1338 aa18.67■□□□□ 0.58
CBX4-204ENST00000495122 MKI67P46013 3256 aaKnown RBP18.66■□□□□ 0.58
CBX4-204ENST00000495122 FAM237AA0A1B0GTK4 181 aa18.66■□□□□ 0.58
CBX4-204ENST00000495122 SLURP2P0DP57 97 aa18.66■□□□□ 0.58
CBX4-204ENST00000495122 CMA1P23946 247 aa18.66■□□□□ 0.58
CBX4-204ENST00000495122 NOVP48745 357 aa18.66■□□□□ 0.58
CBX4-204ENST00000495122 CDK8P49336 464 aa18.66■□□□□ 0.58
CBX4-204ENST00000495122 FSIP1Q8NA03 581 aa18.66■□□□□ 0.58
CBX4-204ENST00000495122 PNMA1Q8ND90 353 aa18.66■□□□□ 0.58
CBX4-204ENST00000495122 AIFM3Q96NN9 605 aa18.66■□□□□ 0.58
CBX4-204ENST00000495122 CLIC4Q9Y696 253 aa18.66■□□□□ 0.58
CBX4-204ENST00000495122 SMIM22K7EJ46 135 aa18.65■□□□□ 0.58
CBX4-204ENST00000495122 PPFIA3O75145 1194 aa18.65■□□□□ 0.58
CBX4-204ENST00000495122 NR1I2O75469 434 aa18.65■□□□□ 0.58
CBX4-204ENST00000495122 CEBPZQ03701 1054 aaKnown RBP18.65■□□□□ 0.58
CBX4-204ENST00000495122 FAM47AQ5JRC9 791 aa18.65■□□□□ 0.58
CBX4-204ENST00000495122 ARMC5Q96C12 935 aa18.65■□□□□ 0.58
CBX4-204ENST00000495122 TRIM44Q96DX7 344 aaPredicted RBP18.65■□□□□ 0.58
CBX4-204ENST00000495122 TIGD1Q96MW7 591 aa18.65■□□□□ 0.58
CBX4-204ENST00000495122 PHF20Q9BVI0 1012 aa18.65■□□□□ 0.58
CBX4-204ENST00000495122 EHD4Q9H223 541 aa18.65■□□□□ 0.58
CBX4-204ENST00000495122 PDHXO00330 501 aa18.64■□□□□ 0.57
CBX4-204ENST00000495122 CUTAO60888 179 aa18.64■□□□□ 0.57
CBX4-204ENST00000495122 CALML3P27482 149 aa18.64■□□□□ 0.57
CBX4-204ENST00000495122 KRT2P35908 639 aa18.64■□□□□ 0.57
CBX4-204ENST00000495122 PLCD1P51178 756 aa18.64■□□□□ 0.57
CBX4-204ENST00000495122 PKN1Q16512 942 aa18.64■□□□□ 0.57
CBX4-204ENST00000495122 GALNT17Q6IS24 598 aa18.64■□□□□ 0.57
CBX4-204ENST00000495122 SASS6Q6UVJ0 657 aa18.64■□□□□ 0.57
CBX4-204ENST00000495122 FAM200AQ8TCP9 573 aa18.64■□□□□ 0.57
CBX4-204ENST00000495122 IL17RBQ9NRM6 502 aa18.64■□□□□ 0.57
CBX4-204ENST00000495122 PLXNB2O15031 1838 aa18.64■□□□□ 0.57
CBX4-204ENST00000495122 CXCL11O14625 94 aa18.63■□□□□ 0.57
CBX4-204ENST00000495122 TBC1D12O60347 775 aa18.63■□□□□ 0.57
CBX4-204ENST00000495122 HLA-DOAP06340 250 aa18.63■□□□□ 0.57
CBX4-204ENST00000495122 SCG2P13521 617 aa18.63■□□□□ 0.57
CBX4-204ENST00000495122 PTPRAP18433 802 aa18.63■□□□□ 0.57
CBX4-204ENST00000495122 GUCY1A2P33402 732 aa18.63■□□□□ 0.57
CBX4-204ENST00000495122 TRAPPC10P48553 1259 aa18.63■□□□□ 0.57
CBX4-204ENST00000495122 LACTBP83111 547 aaPredicted RBP18.63■□□□□ 0.57
CBX4-204ENST00000495122 TYRO3Q06418 890 aa18.63■□□□□ 0.57
CBX4-204ENST00000495122 GABPAQ06546 454 aa18.63■□□□□ 0.57
CBX4-204ENST00000495122 SNW1Q13573 536 aaKnown RBP18.63■□□□□ 0.57
CBX4-204ENST00000495122 ARHGEF6Q15052 776 aa18.63■□□□□ 0.57
CBX4-204ENST00000495122 PTPAQ15257 358 aa18.63■□□□□ 0.57
CBX4-204ENST00000495122 PFKFB3Q16875 520 aaPredicted RBP18.63■□□□□ 0.57
CBX4-204ENST00000495122 C17orf99Q6UX52 265 aa18.63■□□□□ 0.57
CBX4-204ENST00000495122 ELOA2Q8IYF1 753 aaPredicted RBP18.63■□□□□ 0.57
CBX4-204ENST00000495122 FMR1NBQ8N0W7 255 aaPredicted RBP18.63■□□□□ 0.57
CBX4-204ENST00000495122 DYNLL2Q96FJ2 89 aa18.63■□□□□ 0.57
CBX4-204ENST00000495122 FTOQ9C0B1 505 aaKnown RBP eCLIP18.63■□□□□ 0.573e-6■■■□□ 16.5
CBX4-204ENST00000495122 ARHGAP39Q9C0H5 1083 aa18.63■□□□□ 0.57
CBX4-204ENST00000495122 OSBPL5Q9H0X9 879 aaPredicted RBP18.63■□□□□ 0.57
CBX4-204ENST00000495122 DHX36Q9H2U1 1008 aaKnown RBP18.63■□□□□ 0.57
CBX4-204ENST00000495122 NOL7Q9UMY1 257 aaKnown RBP18.63■□□□□ 0.57
CBX4-204ENST00000495122 A0A0G2JLL6 359 aaPredicted RBP18.62■□□□□ 0.57
CBX4-204ENST00000495122 CTNND1O60716 968 aaKnown RBP18.62■□□□□ 0.57
CBX4-204ENST00000495122 PLEKHA8P1O95397 391 aa18.62■□□□□ 0.57
CBX4-204ENST00000495122 TOP1P11387 765 aaKnown RBP18.62■□□□□ 0.57
CBX4-204ENST00000495122 AXDND1Q5T1B0 1012 aaPredicted RBP18.62■□□□□ 0.57
CBX4-204ENST00000495122 GPAT2Q6NUI2 795 aa18.62■□□□□ 0.57
CBX4-204ENST00000495122 PRRT2Q7Z6L0 340 aaPredicted RBP18.62■□□□□ 0.57
CBX4-204ENST00000495122 ZNF579Q8NAF0 562 aaKnown RBP18.62■□□□□ 0.57
CBX4-204ENST00000495122 PICK1Q9NRD5 415 aa18.62■□□□□ 0.57
CBX4-204ENST00000495122 GJB4Q9NTQ9 266 aa18.62■□□□□ 0.57
CBX4-204ENST00000495122 SAP30BPQ9UHR5 308 aaKnown RBP18.62■□□□□ 0.57
CBX4-204ENST00000495122 AFG3L2Q9Y4W6 797 aa18.62■□□□□ 0.57
CBX4-204ENST00000495122 PTCH2Q9Y6C5 1203 aa18.62■□□□□ 0.57
CBX4-204ENST00000495122 V9GY48 417 aaPredicted RBP18.62■□□□□ 0.57
CBX4-204ENST00000495122 POTEFA5A3E0 1075 aa18.61■□□□□ 0.57
CBX4-204ENST00000495122 BTBD18B2RXH4 712 aa18.61■□□□□ 0.57
CBX4-204ENST00000495122 hCG_1984214I3L0E3 225 aa18.61■□□□□ 0.57
CBX4-204ENST00000495122 SRBD1Q8N5C6 995 aaKnown RBP18.61■□□□□ 0.57
CBX4-204ENST00000495122 ZNF713Q8N859 430 aaPredicted RBP18.61■□□□□ 0.57
CBX4-204ENST00000495122 CCDC148Q8NFR7 591 aa18.61■□□□□ 0.57
CBX4-204ENST00000495122 SPZ1Q9BXG8 430 aa18.61■□□□□ 0.57
CBX4-204ENST00000495122 GOLPH3LQ9H4A5 285 aa18.61■□□□□ 0.57
CBX4-204ENST00000495122 CPA4Q9UI42 421 aa18.61■□□□□ 0.57
CBX4-204ENST00000495122 ZHX2Q9Y6X8 837 aa18.61■□□□□ 0.57
CBX4-204ENST00000495122 FAM196BA6NMK8 535 aa18.6■□□□□ 0.57
CBX4-204ENST00000495122 NMT2O60551 498 aa18.6■□□□□ 0.57
CBX4-204ENST00000495122 KIF22Q14807 665 aa18.6■□□□□ 0.57
CBX4-204ENST00000495122 STX1AQ16623 288 aa18.6■□□□□ 0.57
CBX4-204ENST00000495122 KRI1Q8N9T8 703 aaKnown RBP18.6■□□□□ 0.57
CBX4-204ENST00000495122 ZNF333Q96JL9 665 aa18.6■□□□□ 0.57
CBX4-204ENST00000495122 CCDC17Q96LX7 622 aa18.6■□□□□ 0.57
CBX4-204ENST00000495122 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms