RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 USP17L13C9JLJ4 530 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 USP17L11C9JVI0 530 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 USP17L18D6R9N7 530 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 USP17L22D6RA61 530 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 USP17L17D6RBQ6 530 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 USP17L19D6RCP7 530 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 USP17L20D6RJB6 530 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 FLOT1O75955 427 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 GNA11P29992 359 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 USP17L24Q0WX57 530 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 ATL3Q6DD88 541 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 CATSPERGQ6ZRH7 1159 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 FBXO11Q86XK2 927 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 NOSTRINQ8IVI9 506 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 TEX2Q8IWB9 1127 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 SMC1BQ8NDV3 1235 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 MYPNQ86TC9 1320 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 YY1P25490 414 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 HOXA7P31268 230 aaPredicted RBP13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 GJA5P36382 358 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 GNL2Q13823 731 aaKnown RBP13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 BLIDQ8IZY5 108 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 OXER1Q8TDS5 423 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 TNFRSF25Q93038 417 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 C6orf50Q9HD87 102 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 PNMA2Q9UL42 364 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 PCDHA1Q9Y5I3 950 aa13.23□□□□□ -0.29
SLC13A3-211ENST00000495082 SMCO2A6NFE2 343 aa13.22□□□□□ -0.29
SLC13A3-211ENST00000495082 M0R2N6 131 aa13.22□□□□□ -0.29
SLC13A3-211ENST00000495082 DNM1Q05193 864 aaKnown RBP13.22□□□□□ -0.29
SLC13A3-211ENST00000495082 SNAPC2Q13487 334 aa13.22□□□□□ -0.29
SLC13A3-211ENST00000495082 COG2Q14746 738 aa13.22□□□□□ -0.29
SLC13A3-211ENST00000495082 FASTKD5Q7L8L6 764 aaKnown RBP13.22□□□□□ -0.29
SLC13A3-211ENST00000495082 BICD2Q8TD16 824 aa13.22□□□□□ -0.29
SLC13A3-211ENST00000495082 COA7Q96BR5 231 aa13.22□□□□□ -0.29
SLC13A3-211ENST00000495082 WNK4Q96J92 1243 aa13.22□□□□□ -0.29
SLC13A3-211ENST00000495082 GLT8D2Q9H1C3 349 aa13.22□□□□□ -0.29
SLC13A3-211ENST00000495082 SLC38A10Q9HBR0 1119 aa13.22□□□□□ -0.29
SLC13A3-211ENST00000495082 ADAMTS5Q9UNA0 930 aa13.22□□□□□ -0.29
SLC13A3-211ENST00000495082 LOC285556D6RIA3 1793 aa13.22□□□□□ -0.29
SLC13A3-211ENST00000495082 DSG3P32926 999 aa13.21□□□□□ -0.29
SLC13A3-211ENST00000495082 SNAP25P60880 206 aa13.21□□□□□ -0.29
SLC13A3-211ENST00000495082 KRT85P78386 507 aa13.21□□□□□ -0.29
SLC13A3-211ENST00000495082 NR5A1Q13285 461 aa13.21□□□□□ -0.29
SLC13A3-211ENST00000495082 MOGSQ13724 837 aa13.21□□□□□ -0.29
SLC13A3-211ENST00000495082 MYSM1Q5VVJ2 828 aa13.21□□□□□ -0.29
SLC13A3-211ENST00000495082 FAM173BQ6P4H8 233 aa13.21□□□□□ -0.29
SLC13A3-211ENST00000495082 ZNF396Q96N95 335 aaPredicted RBP13.21□□□□□ -0.29
SLC13A3-211ENST00000495082 RIC8AQ9NPQ8 531 aa13.21□□□□□ -0.29
SLC13A3-211ENST00000495082 HOXC10Q9NYD6 342 aa13.21□□□□□ -0.29
SLC13A3-211ENST00000495082 PTPRFP10586 1907 aa13.21□□□□□ -0.29
SLC13A3-211ENST00000495082 TRPM7Q96QT4 1865 aa13.21□□□□□ -0.3
SLC13A3-211ENST00000495082 VWA5AO00534 786 aa13.21□□□□□ -0.3
SLC13A3-211ENST00000495082 TOMM70O94826 608 aa13.21□□□□□ -0.3
SLC13A3-211ENST00000495082 ICAM1P05362 532 aa13.21□□□□□ -0.3
SLC13A3-211ENST00000495082 ZBTB48P10074 688 aaPredicted RBP13.21□□□□□ -0.3
SLC13A3-211ENST00000495082 ADCY7P51828 1080 aa13.21□□□□□ -0.3
SLC13A3-211ENST00000495082 FOXD4L6Q3SYB3 417 aaPredicted RBP13.21□□□□□ -0.3
SLC13A3-211ENST00000495082 TREML2Q5T2D2 321 aa13.21□□□□□ -0.3
SLC13A3-211ENST00000495082 FOXD4L3Q6VB84 417 aaPredicted RBP13.21□□□□□ -0.3
SLC13A3-211ENST00000495082 CHAMP1Q96JM3 812 aa13.21□□□□□ -0.3
SLC13A3-211ENST00000495082 CFAP45Q9UL16 551 aa13.21□□□□□ -0.3
SLC13A3-211ENST00000495082 AGTPBP1Q9UPW5 1226 aa13.21□□□□□ -0.3
SLC13A3-211ENST00000495082 ZBED4O75132 1171 aa13.2□□□□□ -0.3
SLC13A3-211ENST00000495082 GTF2A2P52657 109 aa13.2□□□□□ -0.3
SLC13A3-211ENST00000495082 MRPL12P52815 198 aaKnown RBP13.2□□□□□ -0.3
SLC13A3-211ENST00000495082 OAZ1P54368 228 aa13.2□□□□□ -0.3
SLC13A3-211ENST00000495082 HUNKP57058 714 aa13.2□□□□□ -0.3
SLC13A3-211ENST00000495082 RILPL1Q5EBL4 403 aa13.2□□□□□ -0.3
SLC13A3-211ENST00000495082 SPRYD7Q5W111 196 aa13.2□□□□□ -0.3
SLC13A3-211ENST00000495082 GADL1Q6ZQY3 521 aa13.2□□□□□ -0.3
SLC13A3-211ENST00000495082 PSTPIP2Q9H939 334 aa13.2□□□□□ -0.3
SLC13A3-211ENST00000495082 ZNF536O15090 1300 aa13.2□□□□□ -0.3
SLC13A3-211ENST00000495082 DDX11L8A8MPP1 907 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 GOLGA6L22H0YM25 854 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 ATP2A1O14983 1001 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 CETPP11597 493 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 CCDC174Q6PII3 467 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 SAPCD2Q86UD0 394 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 REXO1Q8N1G1 1221 aaKnown RBP13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 REPS2Q8NFH8 660 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 CUL5Q93034 780 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 ATG4CQ96DT6 458 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 MS4A4AQ96JQ5 239 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 SCAND2PQ9GZW5 306 aaPredicted RBP13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 PCDHA6Q9UN73 950 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 PCDHA8Q9Y5H6 950 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 ABCB11O95342 1321 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 RLFQ13129 1914 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 SPDYE16A6NNV3 312 aaPredicted RBP13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 ADAMTS3O15072 1205 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 TRAPPC10P48553 1259 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 CLK2P49760 499 aaKnown RBP13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 PABPC4Q13310 644 aaKnown RBP eCLIP13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 USH1GQ495M9 461 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 GPAT2Q6NUI2 795 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 LBX2Q6XYB7 198 aa13.19□□□□□ -0.3
SLC13A3-211ENST00000495082 KRT25Q7Z3Z0 450 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms